RNA–Protein interactions for RNA: ENSMUST00000103133.3

Smarce1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarce1, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1-201ENSMUST00000103133 Gm35339A0A140LHH9 1649 aa29.93■■■□□ 2.38
Smarce1-201ENSMUST00000103133 NischQ80TM9 1593 aa29.36■■■□□ 2.29
Smarce1-201ENSMUST00000103133 Abcc9P70170 1546 aa28.55■■■□□ 2.16
Smarce1-201ENSMUST00000103133 Abcc8B2RUS7 1588 aa28.37■■■□□ 2.13
Smarce1-201ENSMUST00000103133 ScribQ80U72 1612 aa27.16■■□□□ 1.94
Smarce1-201ENSMUST00000103133 Dcaf1Q80TR8 1506 aa26.4■■□□□ 1.82
Smarce1-201ENSMUST00000103133 NacadQ5SWP3 1504 aa26.38■■□□□ 1.81
Smarce1-201ENSMUST00000103133 Kdm5dQ62240 1548 aa26.3■■□□□ 1.8
Smarce1-201ENSMUST00000103133 Sycp2Q9CUU3 1500 aa25.84■■□□□ 1.73
Smarce1-201ENSMUST00000103133 Ccdc180J3QNE4 1664 aa25.68■■□□□ 1.7
Smarce1-201ENSMUST00000103133 Rb1cc1Q9ESK9 1588 aa25.61■■□□□ 1.69
Smarce1-201ENSMUST00000103133 BicraF8VPZ9 1578 aa25.4■■□□□ 1.66
Smarce1-201ENSMUST00000103133 Crybg2B7ZCC2 1516 aa25.38■■□□□ 1.65
Smarce1-201ENSMUST00000103133 Baz1aO88379 1555 aa25.34■■□□□ 1.65
Smarce1-201ENSMUST00000103133 Rhox8Q6VSS7 320 aa25.25■■□□□ 1.63
Smarce1-201ENSMUST00000103133 Smarca2Q6DIC0 1577 aa24.65■■□□□ 1.54
Smarce1-201ENSMUST00000103133 Zcchc6Q5BLK4 1491 aaKnown RBP24.65■■□□□ 1.54
Smarce1-201ENSMUST00000103133 Pds5bQ4VA53 1446 aaKnown RBP24.64■■□□□ 1.54
Smarce1-201ENSMUST00000103133 Rtl1Q7M732 1744 aa24.56■■□□□ 1.52
Smarce1-201ENSMUST00000103133 Atad2bE9Q166 1460 aaKnown RBP24.47■■□□□ 1.51
Smarce1-201ENSMUST00000103133 Smarca4Q3TKT4 1613 aaKnown RBP24.4■■□□□ 1.5
Smarce1-201ENSMUST00000103133 Thoc2B1AZI6 1594 aaKnown RBP24.4■■□□□ 1.5
Smarce1-201ENSMUST00000103133 Rpgrip1Q9EPQ2 1331 aa24.27■■□□□ 1.47
Smarce1-201ENSMUST00000103133 Cecr2E9Q2Z1 1453 aa24.25■■□□□ 1.47
Smarce1-201ENSMUST00000103133 Iqgap2Q3UQ44 1575 aa24.19■■□□□ 1.46
Smarce1-201ENSMUST00000103133 Ercc6F8VPZ5 1481 aa24.07■■□□□ 1.44
Smarce1-201ENSMUST00000103133 Wdr62Q3U3T8 1523 aa23.98■■□□□ 1.43
Smarce1-201ENSMUST00000103133 Cttnbp2B9EJA2 1648 aa23.92■■□□□ 1.42
Smarce1-201ENSMUST00000103133 Fam135aQ6NS59 1506 aa23.92■■□□□ 1.42
Smarce1-201ENSMUST00000103133 Baz1bQ9Z277 1479 aa23.9■■□□□ 1.42
Smarce1-201ENSMUST00000103133 Dnajc5bQ9CQ94 199 aa23.9■■□□□ 1.42
Smarce1-201ENSMUST00000103133 Brd4Q9ESU6 1400 aaKnown RBP23.89■■□□□ 1.41
Smarce1-201ENSMUST00000103133 Cc2d2aQ8CFW7 1633 aa23.88■■□□□ 1.41
Smarce1-201ENSMUST00000103133 Frmpd1A2AKB4 1549 aa23.87■■□□□ 1.41
Smarce1-201ENSMUST00000103133 CftrP26361 1476 aa23.85■■□□□ 1.41
Smarce1-201ENSMUST00000103133 Ehmt2Q9Z148 1263 aaKnown RBP23.83■■□□□ 1.4
Smarce1-201ENSMUST00000103133 Synj1Q8CHC4 1574 aa23.81■■□□□ 1.4
Smarce1-201ENSMUST00000103133 Acin1Q9JIX8 1338 aaKnown RBP23.69■■□□□ 1.38
Smarce1-201ENSMUST00000103133 Phldb1Q6PDH0 1371 aaKnown RBP23.67■■□□□ 1.38
Smarce1-201ENSMUST00000103133 Unc13aQ4KUS2 1712 aa23.65■■□□□ 1.38
Smarce1-201ENSMUST00000103133 Ccdc136Q3TVA9 1136 aa23.5■■□□□ 1.35
Smarce1-201ENSMUST00000103133 Trim41Q5NCC3 630 aa23.44■■□□□ 1.34
Smarce1-201ENSMUST00000103133 Pcgf6Q99NA9 353 aa23.4■■□□□ 1.34
Smarce1-201ENSMUST00000103133 Mrc2Q64449 1479 aa23.23■■□□□ 1.31
Smarce1-201ENSMUST00000103133 Ubl4bQ9CQ84 188 aa23.22■■□□□ 1.31
Smarce1-201ENSMUST00000103133 Lamc3Q9R0B6 1581 aa23.2■■□□□ 1.3
Smarce1-201ENSMUST00000103133 Top2bQ64511 1612 aa23.2■■□□□ 1.3
Smarce1-201ENSMUST00000103133 Rsf1E9PWW9 1441 aaKnown RBP23.14■■□□□ 1.29
Smarce1-201ENSMUST00000103133 Golga3P55937 1487 aa23.12■■□□□ 1.29
Smarce1-201ENSMUST00000103133 Esf1Q3V1V3 845 aaKnown RBP23.1■■□□□ 1.29
Smarce1-201ENSMUST00000103133 TnnQ80Z71 1560 aa23.08■■□□□ 1.29
Smarce1-201ENSMUST00000103133 Kif15Q6P9L6 1387 aa22.97■■□□□ 1.27
Smarce1-201ENSMUST00000103133 Cux2P70298 1426 aa22.93■■□□□ 1.26
Smarce1-201ENSMUST00000103133 Fmn1Q05860 1466 aa22.86■■□□□ 1.25
Smarce1-201ENSMUST00000103133 Ube2uB1AUC4 352 aa22.82■■□□□ 1.24
Smarce1-201ENSMUST00000103133 Supt5hO55201 1082 aaKnown RBP22.8■■□□□ 1.24
Smarce1-201ENSMUST00000103133 HrcG5E8J6 738 aa22.8■■□□□ 1.24
Smarce1-201ENSMUST00000103133 Kif21aQ9QXL2 1672 aa22.78■■□□□ 1.24
Smarce1-201ENSMUST00000103133 Camsap1A2AHC3 1581 aa22.75■■□□□ 1.23
Smarce1-201ENSMUST00000103133 Ccdc18Q640L5 1455 aa22.72■■□□□ 1.23
Smarce1-201ENSMUST00000103133 Lrriq1Q0P5X1 1673 aa22.72■■□□□ 1.23
Smarce1-201ENSMUST00000103133 Cep164Q5DU05 1446 aa22.72■■□□□ 1.23
Smarce1-201ENSMUST00000103133 Cngb1E1AZ71 1325 aa22.65■■□□□ 1.22
Smarce1-201ENSMUST00000103133 Neurod1Q60867 357 aa22.61■■□□□ 1.21
Smarce1-201ENSMUST00000103133 Npm1Q61937 292 aaKnown RBP22.6■■□□□ 1.21
Smarce1-201ENSMUST00000103133 LrpprcQ6PB66 1392 aaKnown RBP22.53■■□□□ 1.2
Smarce1-201ENSMUST00000103133 Top2aQ01320 1528 aaKnown RBP22.5■■□□□ 1.19
Smarce1-201ENSMUST00000103133 Eif4g3Q80XI3 1579 aaKnown RBP22.49■■□□□ 1.19
Smarce1-201ENSMUST00000103133 Crocc2F6XLV1 1638 aa22.48■■□□□ 1.19
Smarce1-201ENSMUST00000103133 PogzQ8BZH4 1409 aaKnown RBP22.48■■□□□ 1.19
Smarce1-201ENSMUST00000103133 Dhx29Q6PGC1 1365 aaKnown RBP22.47■■□□□ 1.19
Smarce1-201ENSMUST00000103133 Grin2bQ01097 1482 aa22.44■■□□□ 1.18
Smarce1-201ENSMUST00000103133 Ccdc88bQ4QRL3 1481 aa22.44■■□□□ 1.18
Smarce1-201ENSMUST00000103133 Gab3Q8BSM5 595 aa22.42■■□□□ 1.18
Smarce1-201ENSMUST00000103133 Urb2E9Q7L1 1524 aaKnown RBP22.42■■□□□ 1.18
Smarce1-201ENSMUST00000103133 DiexfQ8BTT6 772 aaKnown RBP22.35■■□□□ 1.17
Smarce1-201ENSMUST00000103133 Plb1Q3TTY0 1478 aa22.34■■□□□ 1.17
Smarce1-201ENSMUST00000103133 NrkQ9R0G8 1455 aa22.34■■□□□ 1.17
Smarce1-201ENSMUST00000103133 Duox2A2AQ99 1517 aa22.33■■□□□ 1.17
Smarce1-201ENSMUST00000103133 Ift140E9PY46 1464 aa22.31■■□□□ 1.16
Smarce1-201ENSMUST00000103133 Efcab5A0JP43 1406 aa22.31■■□□□ 1.16
Smarce1-201ENSMUST00000103133 Pbrm1Q8BSQ9 1634 aaKnown RBP22.28■■□□□ 1.16
Smarce1-201ENSMUST00000103133 Il27Q8K3I6 234 aa22.24■■□□□ 1.15
Smarce1-201ENSMUST00000103133 Gpatch8A2A6A1 1505 aa22.23■■□□□ 1.15
Smarce1-201ENSMUST00000103133 Zeb1Q64318 1117 aa22.23■■□□□ 1.15
Smarce1-201ENSMUST00000103133 Shroom4Q1W617 1475 aa22.19■■□□□ 1.14
Smarce1-201ENSMUST00000103133 Samd9lQ69Z37 1561 aa22.18■■□□□ 1.14
Smarce1-201ENSMUST00000103133 Rusc2Q80U22 1514 aa22.18■■□□□ 1.14
Smarce1-201ENSMUST00000103133 Chic1Q8CBW7 227 aa22.17■■□□□ 1.14
Smarce1-201ENSMUST00000103133 Las1lA2BE28 776 aaKnown RBP22.16■■□□□ 1.14
Smarce1-201ENSMUST00000103133 Disp1Q3TDN0 1521 aa22.13■■□□□ 1.13
Smarce1-201ENSMUST00000103133 Nup160Q9Z0W3 1402 aaKnown RBP22.1■■□□□ 1.13
Smarce1-201ENSMUST00000103133 Setd1bQ8CFT2 1985 aa22.04■■□□□ 1.12
Smarce1-201ENSMUST00000103133 Shroom2A2ALU4 1481 aa22.03■■□□□ 1.12
Smarce1-201ENSMUST00000103133 Cc2d2bA0A286YDU8 1405 aa22.03■■□□□ 1.12
Smarce1-201ENSMUST00000103133 PtprkP35822 1457 aa22.03■■□□□ 1.12
Smarce1-201ENSMUST00000103133 1700123L14RikQ3V2K7 440 aa22.03■■□□□ 1.12
Smarce1-201ENSMUST00000103133 SynmQ70IV5 1561 aa22■■□□□ 1.11
Smarce1-201ENSMUST00000103133 Magi3Q9EQJ9 1476 aa21.99■■□□□ 1.11
Smarce1-201ENSMUST00000103133 Grin2aP35436 1464 aa21.95■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms