RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Dnttip2Q8R2M2 758 aaKnown RBP9.26□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Fmnl2A2APV2 1086 aa9.26□□□□□ -0.93
Ddb1-201ENSMUST00000025649 AU015836B2RUM3 263 aa9.26□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Sf3b2Q3UJB0 878 aaKnown RBP9.26□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Gimap5Q8BWF2 308 aa9.26□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Gimap6Q8K349 305 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Tomm22Q9CPQ3 142 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Dip2aQ8BWT5 1523 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Gprasp1Q5U4C1 1347 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Calcoco2A2A6M5 331 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Farp2Q91VS8 1065 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Chrna2Q91X60 512 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Chd2E9PZM4 1827 aaKnown RBP9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 PrxO55103 1391 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 InsrP15208 1372 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Zc3h13E9Q784 1729 aaKnown RBP9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 CrcpO35427 148 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Idi2Q8BFZ6 227 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 PplQ9R269 1755 aa9.25□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Rnf20Q5DTM8 973 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 PsapQ61207 557 aaKnown RBP9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Rpgrip1lQ8CG73 1264 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 UvssaQ9D479 717 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Rimbp3Q3V0F0 1606 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Tpd52l1O54818 204 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Atl3Q91YH5 541 aa9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Eif2s2Q99L45 331 aaKnown RBP9.24□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Sv2bQ8BG39 683 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Eif2ak4Q9QZ05 1648 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Rbm25B2RY56 838 aaKnown RBP9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Idi1P58044 227 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Vps53Q8CCB4 832 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 PhaxQ9JJT9 385 aaKnown RBP9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Neurod6P48986 337 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Rsph3aQ3UFY4 516 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Smg7Q5RJH6 1138 aaKnown RBP9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Erc2Q6PH08 957 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Cavin4A2AMM0 362 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Tom1O88746 492 aa9.23□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Slit3Q9WVB4 1523 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Ddx54Q8K4L0 874 aaKnown RBP9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 TkfcQ8VC30 578 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Krt82Q99M74 516 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Cspp1B2RX88 1205 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Nap1l3Q794H2 544 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Kri1Q8VDQ9 704 aaKnown RBP9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Glipr1l2Q9CQ35 332 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Cep170bQ80U49 1574 aa9.22□□□□□ -0.93
Ddb1-201ENSMUST00000025649 RdxP26043 583 aaKnown RBP9.21□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Kif16bB1AVY7 1312 aa9.21□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Srek1Q8BZX4 494 aaKnown RBP9.21□□□□□ -0.93
Ddb1-201ENSMUST00000025649 Cetn4Q8K4K1 168 aa9.21□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Nrxn3Q6P9K9 1571 aa9.21□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Sf3a1Q8K4Z5 791 aaKnown RBP9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 TefQ9JLC6 301 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Sh3bgrQ9WUZ7 214 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 KinQ8K339 391 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Kdm5aQ3UXZ9 1690 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Irx3P81067 507 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Scn4aQ9ER60 1841 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Q9D2X8 372 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ccdc171E9Q1U1 1324 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Map3k19E9Q3S4 1311 aa9.2□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Gm21698A0A087WQP8 267 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Plekhd1B2RPU2 505 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Gm21671G3UY31 267 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Tpm3P21107 285 aaKnown RBP9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Bcl2l13P59017 434 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Cplx1P63040 134 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 BcanQ61361 883 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Gm16486A0A1D5RMD1 1434 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 ZgpatQ8VDM1 511 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Brinp3Q499E0 766 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Dennd6aQ8BH65 605 aa9.19□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Casq1O09165 405 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Nectin2P32507 530 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Stard3nlQ9DCI3 235 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Cnnm1Q0GA42 951 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ddx17Q501J6 650 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Kcna6Q61923 529 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Isy1Q69ZQ2 285 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ppp2r1aQ76MZ3 589 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Mphosph10Q810V0 681 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Noc3lQ8VI84 807 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Rbm5Q91YE7 815 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ttll13A4Q9F6 804 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 MsnP26041 577 aaKnown RBP9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Ccp110Q7TSH4 1004 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Slc5a4bQ91ZP4 660 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 NinlQ6ZQ12 1394 aa9.18□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Hspa1lP16627 641 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Lmtk3Q5XJV6 1424 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 A0A1L1SQF0 893 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Med1Q925J9 1575 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Prdm2A2A7B5 1709 aaKnown RBP9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Mcm2P97310 904 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 VgfQ0VGU4 617 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 TimelessQ9R1X4 1197 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Rab3gap2Q8BMG7 1366 aa9.17□□□□□ -0.94
Ddb1-201ENSMUST00000025649 Cdk5rap2Q8K389 1822 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms