Protein–RNA interactions for Protein: Q8BZX4

Srek1, Splicing regulatory glutamine/lysine-rich protein 1, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srek1Q8BZX4 Gm25239-201ENSMUST00000174915 86 ntBASIC41.11■■■■■ 4.17
Srek1Q8BZX4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Srek1Q8BZX4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Srek1Q8BZX4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.33■■■■□ 3.73
Srek1Q8BZX4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Srek1Q8BZX4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Srek1Q8BZX4 Psd-208ENSMUST00000224556 2034 ntBASIC36.93■■■■□ 3.5
Srek1Q8BZX4 Gm15042-201ENSMUST00000120212 883 ntBASIC36.79■■■■□ 3.48
Srek1Q8BZX4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Srek1Q8BZX4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Srek1Q8BZX4 Gm15045-201ENSMUST00000117359 883 ntBASIC36.06■■■■□ 3.36
Srek1Q8BZX4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Srek1Q8BZX4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.85■■■■□ 3.33
Srek1Q8BZX4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Srek1Q8BZX4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Srek1Q8BZX4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Srek1Q8BZX4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
Srek1Q8BZX4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Srek1Q8BZX4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Srek1Q8BZX4 Gm24109-201ENSMUST00000175489 103 ntBASIC35.2■■■■□ 3.23
Srek1Q8BZX4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Srek1Q8BZX4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
Srek1Q8BZX4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Srek1Q8BZX4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Srek1Q8BZX4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
Srek1Q8BZX4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.85■■■■□ 3.17
Srek1Q8BZX4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Srek1Q8BZX4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Srek1Q8BZX4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Srek1Q8BZX4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.59■■■■□ 3.13
Srek1Q8BZX4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Srek1Q8BZX4 Gm23366-201ENSMUST00000175022 89 ntBASIC34.5■■■■□ 3.11
Srek1Q8BZX4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Srek1Q8BZX4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Srek1Q8BZX4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Srek1Q8BZX4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Srek1Q8BZX4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Srek1Q8BZX4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Srek1Q8BZX4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Srek1Q8BZX4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Srek1Q8BZX4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.02■■■■□ 3.04
Srek1Q8BZX4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.94■■■■□ 3.02
Srek1Q8BZX4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Srek1Q8BZX4 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.86■■■■□ 3.01
Srek1Q8BZX4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Srek1Q8BZX4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.8■■■■□ 3
Srek1Q8BZX4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.77■■■■□ 3
Srek1Q8BZX4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
Srek1Q8BZX4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Srek1Q8BZX4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Srek1Q8BZX4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Srek1Q8BZX4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Srek1Q8BZX4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Srek1Q8BZX4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.02■■■□□ 2.88
Srek1Q8BZX4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Srek1Q8BZX4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Srek1Q8BZX4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.93■■■□□ 2.86
Srek1Q8BZX4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Srek1Q8BZX4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Srek1Q8BZX4 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.78■■■□□ 2.84
Srek1Q8BZX4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Srek1Q8BZX4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Srek1Q8BZX4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.7■■■□□ 2.83
Srek1Q8BZX4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Srek1Q8BZX4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
Srek1Q8BZX4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Srek1Q8BZX4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Srek1Q8BZX4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Srek1Q8BZX4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.49■■■□□ 2.79
Srek1Q8BZX4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.48■■■□□ 2.79
Srek1Q8BZX4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Srek1Q8BZX4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Srek1Q8BZX4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Srek1Q8BZX4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Srek1Q8BZX4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Srek1Q8BZX4 Gm27325-201ENSMUST00000175467 74 ntBASIC32.37■■■□□ 2.77
Srek1Q8BZX4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Srek1Q8BZX4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Srek1Q8BZX4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Srek1Q8BZX4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Srek1Q8BZX4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Srek1Q8BZX4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Srek1Q8BZX4 Gm25238-201ENSMUST00000174914 89 ntBASIC32.14■■■□□ 2.74
Srek1Q8BZX4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Srek1Q8BZX4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.11■■■□□ 2.73
Srek1Q8BZX4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Srek1Q8BZX4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
Srek1Q8BZX4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Srek1Q8BZX4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Srek1Q8BZX4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Srek1Q8BZX4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Srek1Q8BZX4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32■■■□□ 2.71
Srek1Q8BZX4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Srek1Q8BZX4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Srek1Q8BZX4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Srek1Q8BZX4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Srek1Q8BZX4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Srek1Q8BZX4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Srek1Q8BZX4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Srek1Q8BZX4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms