RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF2YOR290C EIS1Q05050 843 aaKnown RBP4.49□□□□□ -1.69
SNF2YOR290C ATG17Q06410 417 aa4.49□□□□□ -1.69
SNF2YOR290C CDC53Q12018 815 aaKnown RBP4.49□□□□□ -1.69
SNF2YOR290C MRPL50P53724 139 aa4.48□□□□□ -1.69
SNF2YOR290C YAP7Q08182 245 aa4.48□□□□□ -1.69
SNF2YOR290C SMC6Q12749 1114 aa4.48□□□□□ -1.69
SNF2YOR290C PET494P07390 489 aaPredicted RBP4.48□□□□□ -1.69
SNF2YOR290C CDC48P25694 835 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C ATG14P38270 344 aa4.48□□□□□ -1.69
SNF2YOR290C PET100P38958 111 aa4.48□□□□□ -1.69
SNF2YOR290C VMA10P48836 114 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C ATG23Q06671 453 aa4.48□□□□□ -1.69
SNF2YOR290C BUD6P41697 788 aa4.48□□□□□ -1.69
SNF2YOR290C VTC3Q02725 835 aa4.48□□□□□ -1.69
SNF2YOR290C RRP5Q05022 1729 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C SEM1O94742 89 aa4.48□□□□□ -1.69
SNF2YOR290C APE1P14904 514 aa4.48□□□□□ -1.69
SNF2YOR290C YCR016WP25617 290 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C PRP40P33203 583 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C YKL023WP36103 277 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C JNM1P36224 373 aa4.48□□□□□ -1.69
SNF2YOR290C RGD1P38339 666 aa4.48□□□□□ -1.69
SNF2YOR290C MDV1P47025 714 aa4.48□□□□□ -1.69
SNF2YOR290C NOP9P47077 666 aaKnown RBP4.48□□□□□ -1.69
SNF2YOR290C PRP3Q03338 469 aaPredicted RBP4.48□□□□□ -1.69
SNF2YOR290C YCS4Q06156 1176 aa4.48□□□□□ -1.69
SNF2YOR290C ZDS1P50111 915 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C SPP41P38904 1435 aa4.47□□□□□ -1.69
SNF2YOR290C TSC11P40061 1430 aa4.47□□□□□ -1.69
SNF2YOR290C RPL6BP05739 176 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C DBP3P20447 523 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C LOC1P43586 204 aaPredicted RBP4.47□□□□□ -1.69
SNF2YOR290C IBD2P53892 351 aa4.47□□□□□ -1.69
SNF2YOR290C RIX7Q07844 837 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C NOP14Q99207 810 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C YBL036CP38197 257 aa4.47□□□□□ -1.69
SNF2YOR290C PBY1P38254 753 aa4.47□□□□□ -1.69
SNF2YOR290C GGA2P38817 585 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C RPN3P40016 523 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C UTP18P40362 594 aaPredicted RBP4.47□□□□□ -1.69
SNF2YOR290C DSN1P40568 576 aa4.47□□□□□ -1.69
SNF2YOR290C MLP1Q02455 1875 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C UBC6P33296 250 aaPredicted RBP4.47□□□□□ -1.69
SNF2YOR290C MAL31P38156 614 aa4.47□□□□□ -1.69
SNF2YOR290C SSP120P39931 234 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C VMS1Q04311 632 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C DPB4Q04603 196 aaKnown RBP4.47□□□□□ -1.69
SNF2YOR290C TOM70P07213 617 aaKnown RBP4.46□□□□□ -1.69
SNF2YOR290C PRP9P19736 530 aaKnown RBP4.46□□□□□ -1.69
SNF2YOR290C IRC3Q06683 689 aa4.46□□□□□ -1.69
SNF2YOR290C GEA1P47102 1408 aaPredicted RBP4.46□□□□□ -1.7
SNF2YOR290C YNL144CP53907 740 aa4.46□□□□□ -1.7
SNF2YOR290C VPS64Q03944 604 aa4.46□□□□□ -1.7
SNF2YOR290C CYC8P14922 966 aa4.46□□□□□ -1.7
SNF2YOR290C ALE1Q08548 619 aa4.46□□□□□ -1.7
SNF2YOR290C YIH1P25637 258 aa4.46□□□□□ -1.7
SNF2YOR290C NOP13P53883 403 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SNF2YOR290C TRE2Q08693 809 aa4.46□□□□□ -1.7
SNF2YOR290C DBP10Q12389 995 aaKnown RBP4.46□□□□□ -1.7
SNF2YOR290C SEC39Q12745 709 aa4.46□□□□□ -1.7
SNF2YOR290C YLF2P38746 405 aa4.45□□□□□ -1.7
SNF2YOR290C ALD5P40047 520 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C ALA1P40825 983 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C RPN8Q08723 338 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C IML1P47170 1584 aa4.45□□□□□ -1.7
SNF2YOR290C DEP1P31385 405 aa4.45□□□□□ -1.7
SNF2YOR290C TIF3P34167 436 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C APE4P38821 490 aa4.45□□□□□ -1.7
SNF2YOR290C DJP1P40564 432 aa4.45□□□□□ -1.7
SNF2YOR290C YKE2P52553 114 aa4.45□□□□□ -1.7
SNF2YOR290C SNX41Q04053 625 aa4.45□□□□□ -1.7
SNF2YOR290C IES3Q12345 250 aa4.45□□□□□ -1.7
SNF2YOR290C GAL11P19659 1081 aa4.45□□□□□ -1.7
SNF2YOR290C RRN3P36070 627 aa4.45□□□□□ -1.7
SNF2YOR290C RFC1P38630 861 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C TPO2P53283 614 aa4.45□□□□□ -1.7
SNF2YOR290C CWC22P53333 577 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C PPN1Q04119 674 aa4.45□□□□□ -1.7
SNF2YOR290C YSH1Q06224 779 aaPredicted RBP4.45□□□□□ -1.7
SNF2YOR290C UTP10P42945 1769 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C YTA12P40341 825 aa4.45□□□□□ -1.7
SNF2YOR290C RRP12Q12754 1228 aaKnown RBP4.45□□□□□ -1.7
SNF2YOR290C SIR1P21691 654 aa4.44□□□□□ -1.7
SNF2YOR290C RPC19P28000 142 aaKnown RBP4.44□□□□□ -1.7
SNF2YOR290C MCM10P32354 571 aa4.44□□□□□ -1.7
SNF2YOR290C RSA3Q05942 220 aaKnown RBP4.44□□□□□ -1.7
SNF2YOR290C LAM6Q08001 693 aa4.44□□□□□ -1.7
SNF2YOR290C MSH3P25336 1018 aa4.44□□□□□ -1.7
SNF2YOR290C PHO87P25360 923 aa4.44□□□□□ -1.7
SNF2YOR290C FAB1P34756 2278 aa4.44□□□□□ -1.7
SNF2YOR290C YKR018CP36114 725 aa4.44□□□□□ -1.7
SNF2YOR290C NUP159P40477 1460 aa4.44□□□□□ -1.7
SNF2YOR290C IRR1P40541 1150 aa4.44□□□□□ -1.7
SNF2YOR290C ENT3P47160 408 aa4.44□□□□□ -1.7
SNF2YOR290C SIZ1Q04195 904 aa4.44□□□□□ -1.7
SNF2YOR290C YDR056CQ12025 205 aa4.44□□□□□ -1.7
SNF2YOR290C EMW1P42842 904 aaKnown RBP4.44□□□□□ -1.7
SNF2YOR290C ALG2P43636 503 aa4.44□□□□□ -1.7
SNF2YOR290C CSM3Q04659 317 aa4.44□□□□□ -1.7
SNF2YOR290C YPL225WQ08971 146 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms