RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C PKH3Q03306 898 aaPredicted RBP8.41□□□□□ -1.06
RUP1YOR138C COG4Q06096 861 aa8.41□□□□□ -1.06
RUP1YOR138C EST2Q06163 884 aa8.41□□□□□ -1.06
RUP1YOR138C RRP43P25359 394 aaPredicted RBP8.41□□□□□ -1.06
RUP1YOR138C GRX1P25373 110 aaKnown RBP8.41□□□□□ -1.06
RUP1YOR138C SAC6P32599 642 aaKnown RBP8.41□□□□□ -1.06
RUP1YOR138C PCH2P38126 564 aa8.41□□□□□ -1.06
RUP1YOR138C YGR130CP53278 816 aa8.41□□□□□ -1.06
RUP1YOR138C TAH18Q12181 623 aa8.41□□□□□ -1.06
RUP1YOR138C RPN10P38886 268 aaKnown RBP8.4□□□□□ -1.06
RUP1YOR138C MSH4P40965 878 aaPredicted RBP8.4□□□□□ -1.06
RUP1YOR138C YCG1Q06680 1035 aa8.4□□□□□ -1.06
RUP1YOR138C TMA16Q08687 178 aa8.4□□□□□ -1.06
RUP1YOR138C SPC110P32380 944 aa8.39□□□□□ -1.07
RUP1YOR138C RRP8P38961 392 aaKnown RBP8.39□□□□□ -1.07
RUP1YOR138C MGA2P40578 1113 aa8.39□□□□□ -1.07
RUP1YOR138C VPS75P53853 264 aa8.39□□□□□ -1.07
RUP1YOR138C SPN1Q06505 410 aaPredicted RBP8.39□□□□□ -1.07
RUP1YOR138C MRC1P25588 1096 aa8.39□□□□□ -1.07
RUP1YOR138C RER2P35196 286 aa8.39□□□□□ -1.07
RUP1YOR138C AKR1P39010 764 aa8.39□□□□□ -1.07
RUP1YOR138C SMC3P47037 1230 aa8.39□□□□□ -1.07
RUP1YOR138C PDC1P06169 563 aaKnown RBP8.38□□□□□ -1.07
RUP1YOR138C MSH3P25336 1018 aa8.38□□□□□ -1.07
RUP1YOR138C APP1P53933 587 aa8.38□□□□□ -1.07
RUP1YOR138C HCR1Q05775 265 aaKnown RBP8.38□□□□□ -1.07
RUP1YOR138C SAC3P46674 1301 aa8.38□□□□□ -1.07
RUP1YOR138C CRG1P38892 291 aaRIP-Chip data8.37□□□□□ -1.07not detected
RUP1YOR138C HAL5P38970 855 aaKnown RBP8.37□□□□□ -1.07
RUP1YOR138C APT1P49435 187 aaKnown RBP8.37□□□□□ -1.07
RUP1YOR138C PET111P08468 800 aa8.37□□□□□ -1.07
RUP1YOR138C MPH3P0CE00 602 aa8.37□□□□□ -1.07
RUP1YOR138C SSA2P10592 639 aaKnown RBP8.37□□□□□ -1.07
RUP1YOR138C CLB5P30283 435 aa8.37□□□□□ -1.07
RUP1YOR138C RTT107P38850 1070 aa8.37□□□□□ -1.07
RUP1YOR138C IRC8P47046 822 aa8.37□□□□□ -1.07
RUP1YOR138C STR2P47164 639 aa8.37□□□□□ -1.07
RUP1YOR138C RRB1Q04225 511 aaKnown RBP8.37□□□□□ -1.07
RUP1YOR138C CSC1Q06538 782 aa8.37□□□□□ -1.07
RUP1YOR138C TLG2Q08144 397 aa8.37□□□□□ -1.07
RUP1YOR138C AFT2Q08957 416 aa8.37□□□□□ -1.07
RUP1YOR138C DCS2Q12123 353 aa8.37□□□□□ -1.07
RUP1YOR138C ADR1P07248 1323 aa8.37□□□□□ -1.07
RUP1YOR138C RIM15P43565 1770 aa8.37□□□□□ -1.07
RUP1YOR138C NGR1P32831 672 aaKnown RBP8.36□□□□□ -1.07
RUP1YOR138C CAJ1P39101 391 aa8.36□□□□□ -1.07
RUP1YOR138C KAR5Q04746 504 aa8.36□□□□□ -1.07
RUP1YOR138C PPM2Q08282 695 aa8.36□□□□□ -1.07
RUP1YOR138C GIN4Q12263 1142 aa8.36□□□□□ -1.07
RUP1YOR138C NOP14Q99207 810 aaKnown RBP8.36□□□□□ -1.07
RUP1YOR138C PIF1P07271 859 aa8.36□□□□□ -1.07
RUP1YOR138C DEP1P31385 405 aa8.36□□□□□ -1.07
RUP1YOR138C RBA50Q04418 439 aa8.36□□□□□ -1.07
RUP1YOR138C GFD1Q04839 188 aaKnown RBP8.36□□□□□ -1.07
RUP1YOR138C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RUP1YOR138C YOL098CQ12496 1037 aa8.36□□□□□ -1.07
RUP1YOR138C POM152P39685 1337 aa8.35□□□□□ -1.07
RUP1YOR138C CDC6P09119 513 aa8.35□□□□□ -1.07
RUP1YOR138C CBP3P21560 335 aa8.35□□□□□ -1.07
RUP1YOR138C VPS1P21576 704 aaKnown RBP8.35□□□□□ -1.07
RUP1YOR138C CLB1P24868 471 aa8.35□□□□□ -1.07
RUP1YOR138C ADE17P38009 592 aaKnown RBP8.35□□□□□ -1.07
RUP1YOR138C SPT8P38915 602 aa8.35□□□□□ -1.07
RUP1YOR138C IMH1Q06704 911 aaKnown RBP8.35□□□□□ -1.07
RUP1YOR138C YKL068W-AQ3E826 78 aa8.35□□□□□ -1.07
RUP1YOR138C COQ1P18900 473 aa8.34□□□□□ -1.07
RUP1YOR138C UBC1P21734 215 aaKnown RBP8.34□□□□□ -1.07
RUP1YOR138C SWI4P25302 1093 aaKnown RBP8.34□□□□□ -1.07
RUP1YOR138C URA1P28272 314 aaPredicted RBP8.34□□□□□ -1.07
RUP1YOR138C SAP190P36123 1033 aa8.34□□□□□ -1.07
RUP1YOR138C REI1P38344 393 aaPredicted RBP8.34□□□□□ -1.07
RUP1YOR138C YIR042CP40586 236 aa8.34□□□□□ -1.07
RUP1YOR138C UFD2P54860 961 aa8.34□□□□□ -1.07
RUP1YOR138C FOX2Q02207 900 aaKnown RBP8.34□□□□□ -1.07
RUP1YOR138C GET3Q12154 354 aaKnown RBP8.34□□□□□ -1.07
RUP1YOR138C MCM16Q12262 181 aa8.34□□□□□ -1.07
RUP1YOR138C CHO2P05374 869 aaKnown RBP8.34□□□□□ -1.07
RUP1YOR138C SEC65P29478 273 aa8.34□□□□□ -1.07
RUP1YOR138C DOT5P40553 215 aa8.34□□□□□ -1.07
RUP1YOR138C HAT1Q12341 374 aa8.34□□□□□ -1.07
RUP1YOR138C PHO13P19881 312 aa8.33□□□□□ -1.08
RUP1YOR138C YKR075CP36155 307 aa8.33□□□□□ -1.08
RUP1YOR138C GRX7P38068 203 aa8.33□□□□□ -1.08
RUP1YOR138C SEC9P40357 651 aa8.33□□□□□ -1.08
RUP1YOR138C NDC80P40460 691 aa8.33□□□□□ -1.08
RUP1YOR138C CAF130P53280 1122 aaPredicted RBP8.33□□□□□ -1.08
RUP1YOR138C HDA1P53973 706 aa8.33□□□□□ -1.08
RUP1YOR138C INM2Q05533 292 aa8.33□□□□□ -1.08
RUP1YOR138C THI3Q07471 609 aa8.33□□□□□ -1.08
RUP1YOR138C STO1P34160 861 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C BMH2P34730 273 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C EIS1Q05050 843 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C NBL1Q3E7Y6 73 aa8.32□□□□□ -1.08
RUP1YOR138C CDC37P06101 506 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C RPT3P33298 428 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C GDT1P38301 280 aaPredicted RBP8.32□□□□□ -1.08
RUP1YOR138C GLO3P38682 493 aaKnown RBP8.32□□□□□ -1.08
RUP1YOR138C VPS38Q05919 439 aa8.32□□□□□ -1.08
RUP1YOR138C TFC6Q06339 672 aa8.32□□□□□ -1.08
RUP1YOR138C PSR2Q07949 397 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms