RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W APP1P53933 587 aa3.51□□□□□ -1.85
PHD1YKL043W GBP2P25555 427 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PHD1YKL043W CPS1P27614 576 aa3.5□□□□□ -1.85
PHD1YKL043W MRPL10P36520 322 aa3.5□□□□□ -1.85
PHD1YKL043W RVS167P39743 482 aaKnown RBP3.5□□□□□ -1.85
PHD1YKL043W NDC80P40460 691 aa3.5□□□□□ -1.85
PHD1YKL043W RTF1P53064 558 aa3.5□□□□□ -1.85
PHD1YKL043W YGL140CP53120 1219 aa3.5□□□□□ -1.85
PHD1YKL043W ERV41Q04651 352 aa3.5□□□□□ -1.85
PHD1YKL043W PDC1P06169 563 aaKnown RBP3.49□□□□□ -1.85
PHD1YKL043W SLY41P22215 453 aa3.49□□□□□ -1.85
PHD1YKL043W STE11P23561 717 aa3.49□□□□□ -1.85
PHD1YKL043W SCJ1P25303 377 aa3.49□□□□□ -1.85
PHD1YKL043W SPB4P25808 606 aaPredicted RBP3.49□□□□□ -1.85
PHD1YKL043W RRP1P35178 278 aaPredicted RBP3.49□□□□□ -1.85
PHD1YKL043W SWH1P35845 1188 aa3.49□□□□□ -1.85
PHD1YKL043W MPP10P47083 593 aaKnown RBP3.49□□□□□ -1.85
PHD1YKL043W FPK1P53739 893 aa3.49□□□□□ -1.85
PHD1YKL043W YMR102CQ03177 834 aa3.49□□□□□ -1.85
PHD1YKL043W UTP13Q05946 817 aaKnown RBP3.49□□□□□ -1.85
PHD1YKL043W RPN7Q06103 429 aaKnown RBP3.49□□□□□ -1.85
PHD1YKL043W YSH1Q06224 779 aaPredicted RBP3.49□□□□□ -1.85
PHD1YKL043W PUS1Q12211 544 aaKnown RBP3.49□□□□□ -1.85
PHD1YKL043W RNR2P09938 399 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W YEF3P16521 1044 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W AFT1P22149 690 aa3.48□□□□□ -1.85
PHD1YKL043W HSP104P31539 908 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W RPS0AP32905 252 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W VPS41P38959 992 aa3.48□□□□□ -1.85
PHD1YKL043W YMR124WP39523 943 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W RRD1P40454 393 aaKnown RBP3.48□□□□□ -1.85
PHD1YKL043W HOS4P40480 1083 aa3.48□□□□□ -1.85
PHD1YKL043W SAP155P43612 1002 aa3.48□□□□□ -1.85
PHD1YKL043W YDR444WQ04093 687 aa3.48□□□□□ -1.85
PHD1YKL043W HRQ1Q05549 1077 aa3.48□□□□□ -1.85
PHD1YKL043W MDM38Q08179 573 aa3.48□□□□□ -1.85
PHD1YKL043W ENV9Q08651 330 aa3.48□□□□□ -1.85
PHD1YKL043W PSH1Q12161 406 aa3.48□□□□□ -1.85
PHD1YKL043W GIN4Q12263 1142 aa3.48□□□□□ -1.85
PHD1YKL043W PRP45P28004 379 aaPredicted RBP3.47□□□□□ -1.85
PHD1YKL043W VPS8P39702 1274 aa3.47□□□□□ -1.85
PHD1YKL043W YJR115WP47152 169 aa3.47□□□□□ -1.85
PHD1YKL043W HST3P53687 447 aa3.47□□□□□ -1.85
PHD1YKL043W HEF3P53978 1044 aaKnown RBP3.47□□□□□ -1.85
PHD1YKL043W YDL206WQ12424 762 aa3.47□□□□□ -1.85
PHD1YKL043W PSK1P31374 1356 aa3.47□□□□□ -1.85
PHD1YKL043W DUR1,2P32528 1835 aaKnown RBP3.47□□□□□ -1.85
PHD1YKL043W BIK1P11709 440 aa3.46□□□□□ -1.86
PHD1YKL043W MRPS28P21771 286 aa3.46□□□□□ -1.86
PHD1YKL043W PRD1P25375 712 aa3.46□□□□□ -1.86
PHD1YKL043W TOA1P32773 286 aa3.46□□□□□ -1.86
PHD1YKL043W DLD1P32891 587 aa3.46□□□□□ -1.86
PHD1YKL043W RFC1P38630 861 aaKnown RBP3.46□□□□□ -1.86
PHD1YKL043W RTR1P40084 226 aaPredicted RBP3.46□□□□□ -1.86
PHD1YKL043W IAH1P41734 238 aa3.46□□□□□ -1.86
PHD1YKL043W HXT10P43581 546 aa3.46□□□□□ -1.86
PHD1YKL043W CWH41P53008 833 aa3.46□□□□□ -1.86
PHD1YKL043W KXD1P53158 218 aa3.46□□□□□ -1.86
PHD1YKL043W MAL13P53338 473 aa3.46□□□□□ -1.86
PHD1YKL043W DOS2P54858 310 aa3.46□□□□□ -1.86
PHD1YKL043W STE20Q03497 939 aaKnown RBP3.46□□□□□ -1.86
PHD1YKL043W COG4Q06096 861 aa3.46□□□□□ -1.86
PHD1YKL043W ABP140Q08641 628 aaKnown RBP3.46□□□□□ -1.86
PHD1YKL043W APL5Q08951 932 aaKnown RBP3.46□□□□□ -1.86
PHD1YKL043W YDL176WQ12027 708 aa3.46□□□□□ -1.86
PHD1YKL043W ENT1Q12518 454 aa3.46□□□□□ -1.86
PHD1YKL043W APC1P53886 1748 aa3.46□□□□□ -1.86
PHD1YKL043W LEU2P04173 364 aaPredicted RBP3.45□□□□□ -1.86
PHD1YKL043W RPS24AP0CX31 135 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W RPS24BP0CX32 135 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W DAL5P15365 543 aa3.45□□□□□ -1.86
PHD1YKL043W TRM1P15565 570 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W PRP5P21372 849 aaPredicted RBP3.45□□□□□ -1.86
PHD1YKL043W SEC14P24280 304 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W YEL043WP32618 956 aa3.45□□□□□ -1.86
PHD1YKL043W SWE1P32944 819 aa3.45□□□□□ -1.86
PHD1YKL043W CSE4P36012 229 aa3.45□□□□□ -1.86
PHD1YKL043W TTI1P36097 1038 aa3.45□□□□□ -1.86
PHD1YKL043W TFG2P41896 400 aaPredicted RBP3.45□□□□□ -1.86
PHD1YKL043W NPA3P47122 385 aa3.45□□□□□ -1.86
PHD1YKL043W RRP46P53256 223 aaPredicted RBP3.45□□□□□ -1.86
PHD1YKL043W INP2Q03824 705 aa3.45□□□□□ -1.86
PHD1YKL043W LCB5Q06147 687 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W ATG9Q12142 997 aa3.45□□□□□ -1.86
PHD1YKL043W YKL068W-AQ3E826 78 aa3.45□□□□□ -1.86
PHD1YKL043W ADE6P38972 1358 aaKnown RBP3.45□□□□□ -1.86
PHD1YKL043W CDC16P09798 840 aa3.44□□□□□ -1.86
PHD1YKL043W ESS1P22696 170 aa3.44□□□□□ -1.86
PHD1YKL043W SPT5P27692 1063 aaKnown RBP3.44□□□□□ -1.86
PHD1YKL043W PSO2P30620 661 aa3.44□□□□□ -1.86
PHD1YKL043W TPD3P31383 635 aa3.44□□□□□ -1.86
PHD1YKL043W MUD2P36084 527 aaKnown RBP3.44□□□□□ -1.86
PHD1YKL043W SAP1P39955 897 aaKnown RBP3.44□□□□□ -1.86
PHD1YKL043W CCT5P40413 562 aaKnown RBP3.44□□□□□ -1.86
PHD1YKL043W PXA1P41909 870 aa3.44□□□□□ -1.86
PHD1YKL043W MTR4P47047 1073 aaKnown RBP3.44□□□□□ -1.86
PHD1YKL043W ALD3P54114 506 aa3.44□□□□□ -1.86
PHD1YKL043W TIM50Q02776 476 aa3.44□□□□□ -1.86
PHD1YKL043W TAP42Q04372 366 aa3.44□□□□□ -1.86
PHD1YKL043W ORM2Q06144 216 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms