RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C SYF1Q04048 859 aaPredicted RBP3.48□□□□□ -1.85
NMD2YHR077C LAM6Q08001 693 aa3.48□□□□□ -1.85
NMD2YHR077C CTI6Q08923 506 aa3.48□□□□□ -1.85
NMD2YHR077C CBP3P21560 335 aa3.48□□□□□ -1.85
NMD2YHR077C BUD31P25337 157 aaPredicted RBP3.48□□□□□ -1.85
NMD2YHR077C URA1P28272 314 aaPredicted RBP3.48□□□□□ -1.85
NMD2YHR077C NPL4P33755 580 aa3.48□□□□□ -1.85
NMD2YHR077C PSK2Q08217 1101 aa3.48□□□□□ -1.85
NMD2YHR077C MET1P36150 593 aa3.48□□□□□ -1.85
NMD2YHR077C RFC5P38251 354 aa3.48□□□□□ -1.85
NMD2YHR077C YER130CP39959 443 aa3.48□□□□□ -1.85
NMD2YHR077C RSM25P40496 264 aa3.48□□□□□ -1.85
NMD2YHR077C RAT1Q02792 1006 aaKnown RBP3.48□□□□□ -1.85
NMD2YHR077C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
NMD2YHR077C CYB2P00175 591 aa3.47□□□□□ -1.85
NMD2YHR077C PIF1P07271 859 aa3.47□□□□□ -1.85
NMD2YHR077C GSY2P27472 705 aa3.47□□□□□ -1.85
NMD2YHR077C KRE2P27809 442 aa3.47□□□□□ -1.85
NMD2YHR077C PRO3P32263 286 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C CCC2P38995 1004 aa3.47□□□□□ -1.85
NMD2YHR077C AKR1P39010 764 aa3.47□□□□□ -1.85
NMD2YHR077C KRI1P42846 591 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C RPT4P53549 437 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C SPN1Q06505 410 aaPredicted RBP3.47□□□□□ -1.85
NMD2YHR077C SRP54P20424 541 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C SWI4P25302 1093 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C CSM2P40465 213 aa3.47□□□□□ -1.85
NMD2YHR077C LYS14P40971 790 aa3.47□□□□□ -1.85
NMD2YHR077C RPS15Q01855 142 aaKnown RBP3.47□□□□□ -1.85
NMD2YHR077C TFC6Q06339 672 aa3.47□□□□□ -1.85
NMD2YHR077C DPH6Q12429 685 aa3.47□□□□□ -1.85
NMD2YHR077C IMP2'P32351 346 aa3.46□□□□□ -1.85
NMD2YHR077C BDF1P35817 686 aa3.46□□□□□ -1.85
NMD2YHR077C TTI1P36097 1038 aa3.46□□□□□ -1.85
NMD2YHR077C MRPL10P36520 322 aa3.46□□□□□ -1.85
NMD2YHR077C IOC3P43596 787 aa3.46□□□□□ -1.85
NMD2YHR077C IRC8P47046 822 aa3.46□□□□□ -1.85
NMD2YHR077C ALD2P47771 506 aa3.46□□□□□ -1.85
NMD2YHR077C YKE2P52553 114 aa3.46□□□□□ -1.85
NMD2YHR077C MYO5Q04439 1219 aaKnown RBP3.46□□□□□ -1.85
NMD2YHR077C BUG1Q12191 341 aa3.46□□□□□ -1.85
NMD2YHR077C MPH3P0CE00 602 aa3.46□□□□□ -1.86
NMD2YHR077C PGI1P12709 554 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C PRP40P33203 583 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C RPT3P33298 428 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C CUE3P53137 624 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C WAR1Q03631 944 aa3.46□□□□□ -1.86
NMD2YHR077C GAS5Q08193 484 aa3.46□□□□□ -1.86
NMD2YHR077C MCM3P24279 971 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C SPB4P25808 606 aaPredicted RBP3.46□□□□□ -1.86
NMD2YHR077C RPN10P38886 268 aaKnown RBP3.46□□□□□ -1.86
NMD2YHR077C PCI8P40512 444 aa3.46□□□□□ -1.86
NMD2YHR077C COG8Q04632 607 aa3.46□□□□□ -1.86
NMD2YHR077C SSF2Q12153 453 aaPredicted RBP3.46□□□□□ -1.86
NMD2YHR077C SIT4P20604 311 aa3.45□□□□□ -1.86
NMD2YHR077C DIT2P21595 489 aa3.45□□□□□ -1.86
NMD2YHR077C FRD1P32614 470 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C ANP1P32629 500 aa3.45□□□□□ -1.86
NMD2YHR077C PTK1P36002 662 aaPredicted RBP3.45□□□□□ -1.86
NMD2YHR077C NUG1P40010 520 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C UBP10P53874 792 aaPredicted RBP3.45□□□□□ -1.86
NMD2YHR077C EST2Q06163 884 aa3.45□□□□□ -1.86
NMD2YHR077C BDF2Q07442 638 aa3.45□□□□□ -1.86
NMD2YHR077C TMA16Q08687 178 aa3.45□□□□□ -1.86
NMD2YHR077C SUP35P05453 685 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C RET1P22276 1149 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C SHM1P37292 490 aaPredicted RBP3.45□□□□□ -1.86
NMD2YHR077C KIN4Q01919 800 aa3.45□□□□□ -1.86
NMD2YHR077C TIM50Q02776 476 aa3.45□□□□□ -1.86
NMD2YHR077C RRI2Q12348 645 aa3.45□□□□□ -1.86
NMD2YHR077C SMY1P32364 656 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C GEF1P37020 779 aa3.45□□□□□ -1.86
NMD2YHR077C TCB2P48231 1178 aa3.45□□□□□ -1.86
NMD2YHR077C WRS1Q12109 432 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C GET3Q12154 354 aaKnown RBP3.45□□□□□ -1.86
NMD2YHR077C YOR111WQ99210 232 aa3.45□□□□□ -1.86
NMD2YHR077C MNR2P35724 969 aa3.44□□□□□ -1.86
NMD2YHR077C YFH7P43591 353 aa3.44□□□□□ -1.86
NMD2YHR077C YJL171CP46992 396 aa3.44□□□□□ -1.86
NMD2YHR077C PEX14P53112 341 aa3.44□□□□□ -1.86
NMD2YHR077C ARP5P53946 755 aa3.44□□□□□ -1.86
NMD2YHR077C SRC1Q03707 834 aa3.44□□□□□ -1.86
NMD2YHR077C DIB1Q06819 143 aaPredicted RBP3.44□□□□□ -1.86
NMD2YHR077C BMH2P34730 273 aaKnown RBP3.44□□□□□ -1.86
NMD2YHR077C RXT2P38255 430 aa3.44□□□□□ -1.86
NMD2YHR077C ERG7P38604 731 aa3.44□□□□□ -1.86
NMD2YHR077C YGL138CP53122 345 aa3.44□□□□□ -1.86
NMD2YHR077C UFD2P54860 961 aa3.44□□□□□ -1.86
NMD2YHR077C ERO1Q03103 563 aa3.44□□□□□ -1.86
NMD2YHR077C APL4Q12028 832 aa3.44□□□□□ -1.86
NMD2YHR077C MET6P05694 767 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C TAF13P11747 167 aa3.43□□□□□ -1.86
NMD2YHR077C PFK2P16862 959 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
NMD2YHR077C MAK31P23059 88 aa3.43□□□□□ -1.86
NMD2YHR077C BOI1P38041 980 aaKnown RBP3.43□□□□□ -1.86
NMD2YHR077C ERT1P38140 529 aa3.43□□□□□ -1.86
NMD2YHR077C BUD6P41697 788 aa3.43□□□□□ -1.86
NMD2YHR077C SGD1Q06132 899 aa3.43□□□□□ -1.86
NMD2YHR077C CYC8P14922 966 aa3.43□□□□□ -1.86
NMD2YHR077C PHO13P19881 312 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 220.8 ms