RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSC84	YHR016C	MET1	P36150	593 aa		13.37	□□□□□ -0.27
YSC84	YHR016C	EPL1	P43572	832 aa		13.37	□□□□□ -0.27
YSC84	YHR016C	KAR5	Q04746	504 aa		13.37	□□□□□ -0.27
YSC84	YHR016C	RRI2	Q12348	645 aa		13.37	□□□□□ -0.27
YSC84	YHR016C	DIB1	Q06819	143 aa	Predicted RBP	13.36	□□□□□ -0.27
YSC84	YHR016C	PIF1	P07271	859 aa		13.35	□□□□□ -0.27
YSC84	YHR016C	YKT6	P36015	200 aa	Known RBP	13.35	□□□□□ -0.27
YSC84	YHR016C	TCD1	P38756	429 aa		13.35	□□□□□ -0.27
YSC84	YHR016C	SIS2	P36024	562 aa		13.34	□□□□□ -0.27
YSC84	YHR016C	CRG1	P38892	291 aa	RIP-Chip data	13.34	□□□□□ -0.27	not detected
YSC84	YHR016C	CEP3	P40969	608 aa		13.34	□□□□□ -0.27
YSC84	YHR016C	WAR1	Q03631	944 aa		13.34	□□□□□ -0.27
YSC84	YHR016C	TFC8	Q12308	588 aa		13.34	□□□□□ -0.27
YSC84	YHR016C	DIT2	P21595	489 aa		13.33	□□□□□ -0.28
YSC84	YHR016C	BDF2	Q07442	638 aa		13.33	□□□□□ -0.28
YSC84	YHR016C	SFI1	Q12369	946 aa		13.33	□□□□□ -0.28
YSC84	YHR016C	GLO3	P38682	493 aa	Known RBP	13.32	□□□□□ -0.28
YSC84	YHR016C	SPN1	Q06505	410 aa	Predicted RBP	13.32	□□□□□ -0.28
YSC84	YHR016C	HSP82	P02829	709 aa	Known RBP	13.31	□□□□□ -0.28
YSC84	YHR016C	MPH3	P0CE00	602 aa		13.31	□□□□□ -0.28
YSC84	YHR016C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.31	□□□□□ -0.28	not detected
YSC84	YHR016C	CBP3	P21560	335 aa		13.31	□□□□□ -0.28
YSC84	YHR016C	MCM4	P30665	933 aa	Known RBP	13.31	□□□□□ -0.28
YSC84	YHR016C	TFG2	P41896	400 aa	Predicted RBP	13.31	□□□□□ -0.28
YSC84	YHR016C	ENP2	P48234	707 aa	Known RBP	13.31	□□□□□ -0.28
YSC84	YHR016C	EST2	Q06163	884 aa		13.31	□□□□□ -0.28
YSC84	YHR016C	PPM2	Q08282	695 aa		13.31	□□□□□ -0.28
YSC84	YHR016C	PMD1	P32634	1753 aa		13.31	□□□□□ -0.28
YSC84	YHR016C	RER2	P35196	286 aa		13.3	□□□□□ -0.28
YSC84	YHR016C	NOC2	P39744	710 aa	Known RBP	13.3	□□□□□ -0.28
YSC84	YHR016C	QCR6	P00127	147 aa		13.3	□□□□□ -0.28
YSC84	YHR016C	LTV1	P34078	463 aa		13.3	□□□□□ -0.28
YSC84	YHR016C	MSN5	P52918	1224 aa		13.3	□□□□□ -0.28
YSC84	YHR016C	ISW2	Q08773	1120 aa		13.3	□□□□□ -0.28
YSC84	YHR016C	HXK1	P04806	485 aa	Known RBP	13.29	□□□□□ -0.28
YSC84	YHR016C	PFF1	P38244	976 aa		13.29	□□□□□ -0.28
YSC84	YHR016C	IRC8	P47046	822 aa		13.29	□□□□□ -0.28
YSC84	YHR016C	RGP1	P16664	663 aa		13.28	□□□□□ -0.28
YSC84	YHR016C	PSY4	P38193	441 aa		13.28	□□□□□ -0.28
YSC84	YHR016C	RPN10	P38886	268 aa	Known RBP	13.28	□□□□□ -0.28
YSC84	YHR016C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.28	□□□□□ -0.28	not detected
YSC84	YHR016C	ERT1	P38140	529 aa		13.27	□□□□□ -0.29
YSC84	YHR016C	AKR1	P39010	764 aa		13.27	□□□□□ -0.29
YSC84	YHR016C	EAF6	P47128	113 aa		13.27	□□□□□ -0.29
YSC84	YHR016C	SYF1	Q04048	859 aa	Predicted RBP	13.27	□□□□□ -0.29
YSC84	YHR016C	IRC3	Q06683	689 aa		13.27	□□□□□ -0.29
YSC84	YHR016C	DCS2	Q12123	353 aa		13.27	□□□□□ -0.29
YSC84	YHR016C	RPL22A	P05749	121 aa	Known RBP	13.26	□□□□□ -0.29
YSC84	YHR016C	NGR1	P32831	672 aa	Known RBP	13.26	□□□□□ -0.29
YSC84	YHR016C	COQ1	P18900	473 aa		13.25	□□□□□ -0.29
YSC84	YHR016C	HCA4	P20448	770 aa	Known RBP	13.25	□□□□□ -0.29
YSC84	YHR016C	SPC110	P32380	944 aa		13.25	□□□□□ -0.29
YSC84	YHR016C	FAR11	P53917	953 aa		13.25	□□□□□ -0.29
YSC84	YHR016C	COG4	Q06096	861 aa		13.25	□□□□□ -0.29
YSC84	YHR016C	NPL4	P33755	580 aa		13.24	□□□□□ -0.29
YSC84	YHR016C	YKL222C	P35995	705 aa		13.24	□□□□□ -0.29
YSC84	YHR016C	GRX7	P38068	203 aa		13.24	□□□□□ -0.29
YSC84	YHR016C	FIG2	P25653	1609 aa		13.24	□□□□□ -0.29
YSC84	YHR016C	SIT4	P20604	311 aa		13.23	□□□□□ -0.29
YSC84	YHR016C	SWI4	P25302	1093 aa	Known RBP	13.23	□□□□□ -0.29
YSC84	YHR016C	URA1	P28272	314 aa	Predicted RBP	13.23	□□□□□ -0.29
YSC84	YHR016C	SMY1	P32364	656 aa	Known RBP	13.23	□□□□□ -0.29
YSC84	YHR016C	BMH2	P34730	273 aa	Known RBP	13.23	□□□□□ -0.29
YSC84	YHR016C	IOC3	P43596	787 aa		13.23	□□□□□ -0.29
YSC84	YHR016C	VPS75	P53853	264 aa		13.23	□□□□□ -0.29
YSC84	YHR016C	SRC1	Q03707	834 aa		13.23	□□□□□ -0.29
YSC84	YHR016C	THI3	Q07471	609 aa		13.23	□□□□□ -0.29
YSC84	YHR016C	CTT1	P06115	562 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	PET111	P08468	800 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	CDC6	P09119	513 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	CAF20	P12962	161 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	CIN4	P39110	191 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	STR2	P47164	639 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	CUE3	P53137	624 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	ERO1	Q03103	563 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	TMA16	Q08687	178 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.22	□□□□□ -0.29	not detected
YSC84	YHR016C	CHO2	P05374	869 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	FRD1	P32614	470 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	GEF1	P37020	779 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	RRP8	P38961	392 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	VPS60	Q03390	229 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	APL4	Q12028	832 aa		13.22	□□□□□ -0.29
YSC84	YHR016C	GET3	Q12154	354 aa	Known RBP	13.22	□□□□□ -0.29
YSC84	YHR016C	CDC15	P27636	974 aa		13.21	□□□□□ -0.3
YSC84	YHR016C	MGM1	P32266	881 aa		13.21	□□□□□ -0.3
YSC84	YHR016C	YIR042C	P40586	236 aa		13.21	□□□□□ -0.3
YSC84	YHR016C	INM2	Q05533	292 aa		13.21	□□□□□ -0.3
YSC84	YHR016C	CYB2	P00175	591 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	VPS1	P21576	704 aa	Known RBP	13.2	□□□□□ -0.3
YSC84	YHR016C	NUG1	P40010	520 aa	Known RBP	13.2	□□□□□ -0.3
YSC84	YHR016C	OSW7	P43611	510 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	HDA1	P53973	706 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	UFD2	P54860	961 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	SAS4	Q04003	481 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	TFC6	Q06339	672 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	YCG1	Q06680	1035 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	DPH6	Q12429	685 aa		13.2	□□□□□ -0.3
YSC84	YHR016C	PHO13	P19881	312 aa		13.19	□□□□□ -0.3
YSC84	YHR016C	PCH2	P38126	564 aa		13.19	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms