RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W THI3Q07471 609 aa6.04□□□□□ -1.44
VPS29YHR012W YDL144CQ07589 356 aa6.04□□□□□ -1.44
VPS29YHR012W YEL077CQ3E7X8 1277 aa6.04□□□□□ -1.44
VPS29YHR012W MAC1P35192 417 aa6.03□□□□□ -1.44
VPS29YHR012W APE3P37302 537 aaKnown RBP6.03□□□□□ -1.44
VPS29YHR012W SPL2P38839 148 aa6.03□□□□□ -1.44
VPS29YHR012W NIT1P40447 199 aa6.03□□□□□ -1.44
VPS29YHR012W RBA50Q04418 439 aa6.03□□□□□ -1.44
VPS29YHR012W GSC2P40989 1895 aa6.02□□□□□ -1.44
VPS29YHR012W STV1P37296 890 aa6.02□□□□□ -1.45
VPS29YHR012W ARG82P07250 355 aa6.01□□□□□ -1.45
VPS29YHR012W MOT2P34909 587 aaKnown RBP6.01□□□□□ -1.45
VPS29YHR012W PNT1P38969 423 aa6.01□□□□□ -1.45
VPS29YHR012W UBP12P39538 1254 aa6.01□□□□□ -1.45
VPS29YHR012W HEF3P53978 1044 aaKnown RBP6.01□□□□□ -1.45
VPS29YHR012W IRC4Q03036 179 aa6.01□□□□□ -1.45
VPS29YHR012W WRS1Q12109 432 aaKnown RBP6.01□□□□□ -1.45
VPS29YHR012W RPP0P05317 312 aaKnown RBP6□□□□□ -1.45
VPS29YHR012W LCB1P25045 558 aaKnown RBP6□□□□□ -1.45
VPS29YHR012W MTC3P53077 123 aa6□□□□□ -1.45
VPS29YHR012W MAK21Q12176 1025 aaKnown RBP6□□□□□ -1.45
VPS29YHR012W RPS7AP26786 190 aaKnown RBP5.99□□□□□ -1.45
VPS29YHR012W MRF1P30775 413 aaPredicted RBP5.98□□□□□ -1.45
VPS29YHR012W TPS3P38426 1054 aaKnown RBP5.98□□□□□ -1.45
VPS29YHR012W UTP7P40055 554 aaKnown RBP5.98□□□□□ -1.45
VPS29YHR012W SPR3P41901 512 aa5.98□□□□□ -1.45
VPS29YHR012W YFH7P43591 353 aa5.98□□□□□ -1.45
VPS29YHR012W YPP1P46951 817 aa5.98□□□□□ -1.45
VPS29YHR012W PUS6P53294 404 aa5.98□□□□□ -1.45
VPS29YHR012W ADR1P07248 1323 aa5.98□□□□□ -1.45
VPS29YHR012W TOS4Q06266 489 aa5.97□□□□□ -1.45
VPS29YHR012W GIN4Q12263 1142 aa5.97□□□□□ -1.45
VPS29YHR012W KEX1P09620 729 aa5.96□□□□□ -1.46
VPS29YHR012W VPS27P40343 622 aaKnown RBP5.96□□□□□ -1.46
VPS29YHR012W SGD1Q06132 899 aa5.96□□□□□ -1.46
VPS29YHR012W FLO11P08640 1367 aa5.95□□□□□ -1.46
VPS29YHR012W PIF1P07271 859 aa5.95□□□□□ -1.46
VPS29YHR012W DAL5P15365 543 aa5.95□□□□□ -1.46
VPS29YHR012W ASH1P34233 588 aa5.95□□□□□ -1.46
VPS29YHR012W NOP2P40991 618 aaKnown RBP5.95□□□□□ -1.46
VPS29YHR012W APL6P46682 809 aa5.95□□□□□ -1.46
VPS29YHR012W YLR225CQ05948 407 aaKnown RBP5.95□□□□□ -1.46
VPS29YHR012W RPS19AP07280 144 aaKnown RBP5.94□□□□□ -1.46
VPS29YHR012W RPS19BP07281 144 aaPredicted RBP5.94□□□□□ -1.46
VPS29YHR012W RAD53P22216 821 aa5.94□□□□□ -1.46
VPS29YHR012W SWC3P31376 625 aa5.94□□□□□ -1.46
VPS29YHR012W RAD24P32641 659 aa5.94□□□□□ -1.46
VPS29YHR012W SSF1P38789 453 aaPredicted RBP5.94□□□□□ -1.46
VPS29YHR012W BOI2P39969 1040 aa5.94□□□□□ -1.46
VPS29YHR012W NET1P47035 1189 aa5.94□□□□□ -1.46
VPS29YHR012W YGR122WP53272 402 aa5.94□□□□□ -1.46
VPS29YHR012W RPP1BP10622 106 aaKnown RBP5.93□□□□□ -1.46
VPS29YHR012W OCT1P35999 772 aa5.93□□□□□ -1.46
VPS29YHR012W HGH1P48362 394 aaKnown RBP5.93□□□□□ -1.46
VPS29YHR012W YRB30P53107 440 aaPredicted RBP5.93□□□□□ -1.46
VPS29YHR012W GCR2Q01722 534 aa5.93□□□□□ -1.46
VPS29YHR012W CDC73Q06697 393 aa5.93□□□□□ -1.46
VPS29YHR012W CDC45Q08032 650 aa5.93□□□□□ -1.46
VPS29YHR012W RRI2Q12348 645 aa5.93□□□□□ -1.46
VPS29YHR012W PMA1P05030 918 aaKnown RBP5.92□□□□□ -1.46
VPS29YHR012W PFK2P16862 959 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
VPS29YHR012W SEC18P18759 758 aaKnown RBP5.92□□□□□ -1.46
VPS29YHR012W GBP2P25555 427 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
VPS29YHR012W VAB2P40003 282 aa5.92□□□□□ -1.46
VPS29YHR012W PPM2Q08282 695 aa5.92□□□□□ -1.46
VPS29YHR012W PCL8Q08966 492 aa5.92□□□□□ -1.46
VPS29YHR012W TY3A-GQ12173 290 aa5.92□□□□□ -1.46
VPS29YHR012W TY3A-IQ99219 290 aa5.92□□□□□ -1.46
VPS29YHR012W PDR1P12383 1068 aa5.91□□□□□ -1.46
VPS29YHR012W SUI2P20459 304 aaKnown RBP5.91□□□□□ -1.46
VPS29YHR012W ADP1P25371 1049 aa5.91□□□□□ -1.46
VPS29YHR012W RPT3P33298 428 aaKnown RBP5.91□□□□□ -1.46
VPS29YHR012W MDL2P33311 773 aa5.91□□□□□ -1.46
VPS29YHR012W MSH4P40965 878 aaPredicted RBP5.91□□□□□ -1.46
VPS29YHR012W LYS14P40971 790 aa5.91□□□□□ -1.46
VPS29YHR012W BRE2P43132 505 aa5.91□□□□□ -1.46
VPS29YHR012W ATG1P53104 897 aa5.91□□□□□ -1.46
VPS29YHR012W CSI1Q04368 295 aa5.91□□□□□ -1.46
VPS29YHR012W CYB2P00175 591 aa5.9□□□□□ -1.46
VPS29YHR012W PAH1P32567 862 aa5.9□□□□□ -1.46
VPS29YHR012W PTK1P36002 662 aaPredicted RBP5.9□□□□□ -1.46
VPS29YHR012W MCD4P36051 919 aa5.9□□□□□ -1.46
VPS29YHR012W PAM1P37304 830 aaKnown RBP5.9□□□□□ -1.46
VPS29YHR012W ERG7P38604 731 aa5.9□□□□□ -1.46
VPS29YHR012W GLO3P38682 493 aaKnown RBP5.9□□□□□ -1.46
VPS29YHR012W KEL1P38853 1164 aaKnown RBP5.9□□□□□ -1.46
VPS29YHR012W PSF2P40359 213 aa5.9□□□□□ -1.46
VPS29YHR012W HXT10P43581 546 aa5.9□□□□□ -1.46
VPS29YHR012W SNU71P53207 620 aaKnown RBP5.9□□□□□ -1.46
VPS29YHR012W SUB2Q07478 446 aaKnown RBP5.9□□□□□ -1.46
VPS29YHR012W CFT2Q12102 859 aaPredicted RBP5.9□□□□□ -1.46
VPS29YHR012W SNF3P10870 884 aa5.89□□□□□ -1.47
VPS29YHR012W YBL028CP38202 106 aa5.89□□□□□ -1.47
VPS29YHR012W PIP2P52960 996 aa5.89□□□□□ -1.47
VPS29YHR012W INM2Q05533 292 aa5.89□□□□□ -1.47
VPS29YHR012W NCB2Q92317 146 aa5.89□□□□□ -1.47
VPS29YHR012W DUR1,2P32528 1835 aaKnown RBP5.89□□□□□ -1.47
VPS29YHR012W FBP1P09201 348 aa5.88□□□□□ -1.47
VPS29YHR012W KIN1P13185 1064 aa5.88□□□□□ -1.47
VPS29YHR012W GAR1P28007 205 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms