RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C STE23Q06010 1027 aa3.88□□□□□ -1.79
SPT4YGR063C BUD21Q08492 214 aaPredicted RBP3.88□□□□□ -1.79
SPT4YGR063C CHS5Q12114 671 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C VPS5Q92331 675 aa3.88□□□□□ -1.79
SPT4YGR063C VMR1P38735 1592 aa3.88□□□□□ -1.79
SPT4YGR063C ADE6P38972 1358 aaKnown RBP3.88□□□□□ -1.79
SPT4YGR063C GAL11P19659 1081 aa3.87□□□□□ -1.79
SPT4YGR063C RPO26P20435 155 aa3.87□□□□□ -1.79
SPT4YGR063C UBP1P25037 809 aa3.87□□□□□ -1.79
SPT4YGR063C GCD6P32501 712 aaKnown RBP3.87□□□□□ -1.79
SPT4YGR063C PIM1P36775 1133 aa3.87□□□□□ -1.79
SPT4YGR063C BRN1P38170 754 aa3.87□□□□□ -1.79
SPT4YGR063C SHC1P39000 512 aa3.87□□□□□ -1.79
SPT4YGR063C BEM4P39011 633 aa3.87□□□□□ -1.79
SPT4YGR063C VID28P40547 921 aa3.87□□□□□ -1.79
SPT4YGR063C SEC27P41811 889 aaKnown RBP3.87□□□□□ -1.79
SPT4YGR063C PXA1P41909 870 aa3.87□□□□□ -1.79
SPT4YGR063C GCN20P43535 752 aaKnown RBP3.87□□□□□ -1.79
SPT4YGR063C YFR006WP43590 535 aa3.87□□□□□ -1.79
SPT4YGR063C SUM1P46676 1062 aa3.87□□□□□ -1.79
SPT4YGR063C MRX12P47084 519 aa3.87□□□□□ -1.79
SPT4YGR063C YJR142WP47173 342 aa3.87□□□□□ -1.79
SPT4YGR063C RRP46P53256 223 aaPredicted RBP3.87□□□□□ -1.79
SPT4YGR063C RIA1P53893 1110 aa3.87□□□□□ -1.79
SPT4YGR063C SEC5P89102 971 aa3.87□□□□□ -1.79
SPT4YGR063C SSL2Q00578 843 aa3.87□□□□□ -1.79
SPT4YGR063C FMP30Q02883 468 aa3.87□□□□□ -1.79
SPT4YGR063C FAR8Q05040 523 aa3.87□□□□□ -1.79
SPT4YGR063C DPL1Q05567 589 aa3.87□□□□□ -1.79
SPT4YGR063C NKP2Q06162 153 aa3.87□□□□□ -1.79
SPT4YGR063C CIR2Q08822 631 aa3.87□□□□□ -1.79
SPT4YGR063C SPO14P36126 1683 aa3.87□□□□□ -1.79
SPT4YGR063C USO1P25386 1790 aa3.86□□□□□ -1.79
SPT4YGR063C TY1B-JR2P47100 1755 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C TY1B-ER2Q03619 1755 aa3.86□□□□□ -1.79
SPT4YGR063C TY1B-MR1Q04214 1755 aa3.86□□□□□ -1.79
SPT4YGR063C TY1B-MR2Q04670 1755 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C TY1B-LR1Q12088 1755 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C TY1B-NL1Q12112 1755 aa3.86□□□□□ -1.79
SPT4YGR063C TY1B-GR1Q12141 1755 aa3.86□□□□□ -1.79
SPT4YGR063C TY1B-BLQ12490 1755 aa3.86□□□□□ -1.79
SPT4YGR063C TUP1P16649 713 aa3.86□□□□□ -1.79
SPT4YGR063C MAK11P20484 414 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C CLB4P24871 460 aa3.86□□□□□ -1.79
SPT4YGR063C BUD14P27637 709 aa3.86□□□□□ -1.79
SPT4YGR063C MET4P32389 672 aa3.86□□□□□ -1.79
SPT4YGR063C RPN2P32565 945 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C NFU1P32860 256 aa3.86□□□□□ -1.79
SPT4YGR063C TAF5P38129 798 aa3.86□□□□□ -1.79
SPT4YGR063C ERC1P38767 581 aa3.86□□□□□ -1.79
SPT4YGR063C CCT4P39078 528 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C TFG2P41896 400 aaPredicted RBP3.86□□□□□ -1.79
SPT4YGR063C VPS53P47061 822 aa3.86□□□□□ -1.79
SPT4YGR063C RTF1P53064 558 aa3.86□□□□□ -1.79
SPT4YGR063C LSG1P53145 640 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C RBA50Q04418 439 aa3.86□□□□□ -1.79
SPT4YGR063C KRE28Q04431 385 aa3.86□□□□□ -1.79
SPT4YGR063C POB3Q04636 552 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C ATG26Q06321 1198 aa3.86□□□□□ -1.79
SPT4YGR063C THI22Q06490 572 aa3.86□□□□□ -1.79
SPT4YGR063C PSR1Q07800 427 aa3.86□□□□□ -1.79
SPT4YGR063C RUD3Q12234 484 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C NUP192P47054 1683 aa3.86□□□□□ -1.79
SPT4YGR063C PDR18P53756 1333 aa3.86□□□□□ -1.79
SPT4YGR063C RPO21P04050 1733 aaKnown RBP3.86□□□□□ -1.79
SPT4YGR063C NTE1Q04958 1679 aa3.85□□□□□ -1.79
SPT4YGR063C PRT1P06103 763 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C SUI3P09064 285 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C YMR085WP0CF18 432 aa3.85□□□□□ -1.79
SPT4YGR063C PET122P10355 254 aa3.85□□□□□ -1.79
SPT4YGR063C SPE2P21182 396 aa3.85□□□□□ -1.79
SPT4YGR063C PRE10P21242 288 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SPT4YGR063C DBP1P24784 617 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C PRD1P25375 712 aa3.85□□□□□ -1.79
SPT4YGR063C CDC48P25694 835 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C CDC60P26637 1090 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C RAM2P29703 316 aa3.85□□□□□ -1.79
SPT4YGR063C SWC3P31376 625 aa3.85□□□□□ -1.79
SPT4YGR063C PDB1P32473 366 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C SEG2P34250 1132 aa3.85□□□□□ -1.79
SPT4YGR063C KDX1P36005 433 aa3.85□□□□□ -1.79
SPT4YGR063C YKR018CP36114 725 aa3.85□□□□□ -1.79
SPT4YGR063C HSM3P38348 480 aa3.85□□□□□ -1.79
SPT4YGR063C STS1P38637 319 aa3.85□□□□□ -1.79
SPT4YGR063C HXT13P39924 564 aa3.85□□□□□ -1.79
SPT4YGR063C ARB1P40024 610 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C YIL001WP40560 513 aa3.85□□□□□ -1.79
SPT4YGR063C YIR042CP40586 236 aa3.85□□□□□ -1.79
SPT4YGR063C HUL4P40985 892 aa3.85□□□□□ -1.79
SPT4YGR063C SPR3P41901 512 aa3.85□□□□□ -1.79
SPT4YGR063C GPD2P41911 440 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C ALD4P46367 519 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C SHE10P53075 577 aa3.85□□□□□ -1.79
SPT4YGR063C YGL081WP53156 320 aa3.85□□□□□ -1.79
SPT4YGR063C LSC1P53598 329 aaKnown RBP3.85□□□□□ -1.79
SPT4YGR063C NOP15P53927 220 aaPredicted RBP3.85□□□□□ -1.79
SPT4YGR063C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SPT4YGR063C MFM1Q02783 413 aa3.85□□□□□ -1.79
SPT4YGR063C HOT1Q03213 719 aa3.85□□□□□ -1.79
SPT4YGR063C DNL4Q08387 944 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms