RNA–Protein interactions for RNA: YDR447C

RPS17B, Transcript of Ribosomal protein 51 (rp51) of the small (40s) subunit, yeastyeast

Gene RPS17B, Length 411 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS17BYDR447C SRF1Q12516 437 aa3.63□□□□□ -1.83
RPS17BYDR447C RGP1P16664 663 aa3.62□□□□□ -1.83
RPS17BYDR447C PYC2P32327 1180 aaKnown RBP3.62□□□□□ -1.83
RPS17BYDR447C PIC2P40035 300 aa3.62□□□□□ -1.83
RPS17BYDR447C YIL165CP40446 119 aa3.62□□□□□ -1.83
RPS17BYDR447C NUT1P53114 1132 aa3.62□□□□□ -1.83
RPS17BYDR447C MON1P53129 644 aa3.62□□□□□ -1.83
RPS17BYDR447C LSC2P53312 427 aa3.62□□□□□ -1.83
RPS17BYDR447C YNR040WP53736 256 aa3.62□□□□□ -1.83
RPS17BYDR447C CWC24P53769 259 aa3.62□□□□□ -1.83
RPS17BYDR447C ULP1Q02724 621 aa3.62□□□□□ -1.83
RPS17BYDR447C MSH6Q03834 1242 aa3.62□□□□□ -1.83
RPS17BYDR447C WRS1Q12109 432 aaKnown RBP3.62□□□□□ -1.83
RPS17BYDR447C DUT1P33317 147 aa3.61□□□□□ -1.83
RPS17BYDR447C FAA4P47912 694 aaKnown RBP3.61□□□□□ -1.83
RPS17BYDR447C ADI1Q03677 179 aa3.61□□□□□ -1.83
RPS17BYDR447C IOC4Q04213 475 aa3.61□□□□□ -1.83
RPS17BYDR447C TCB1Q12466 1186 aa3.61□□□□□ -1.83
RPS17BYDR447C CDC34P14682 295 aa3.6□□□□□ -1.83
RPS17BYDR447C KAR2P16474 682 aaKnown RBP3.6□□□□□ -1.83
RPS17BYDR447C SRP40P32583 406 aaPredicted RBP3.6□□□□□ -1.83
RPS17BYDR447C SPC42P36094 363 aa3.6□□□□□ -1.83
RPS17BYDR447C BRN1P38170 754 aa3.6□□□□□ -1.83
RPS17BYDR447C ECM2P38241 364 aaKnown RBP3.6□□□□□ -1.83
RPS17BYDR447C APM2P38700 605 aa3.6□□□□□ -1.83
RPS17BYDR447C TAT2P38967 592 aa3.6□□□□□ -1.83
RPS17BYDR447C UBP15P50101 1230 aa3.6□□□□□ -1.83
RPS17BYDR447C RNH70P53331 553 aa3.6□□□□□ -1.83
RPS17BYDR447C GDE1Q02979 1223 aa3.6□□□□□ -1.83
RPS17BYDR447C NSE3Q05541 303 aa3.6□□□□□ -1.83
RPS17BYDR447C CDC19P00549 500 aaKnown RBP3.59□□□□□ -1.83
RPS17BYDR447C GCR1P07261 785 aa3.59□□□□□ -1.83
RPS17BYDR447C CIT2P08679 460 aa3.59□□□□□ -1.83
RPS17BYDR447C YKL091CP33324 310 aaKnown RBP3.59□□□□□ -1.83
RPS17BYDR447C MRPL16P38064 232 aa3.59□□□□□ -1.83
RPS17BYDR447C RIM11P38615 370 aa3.59□□□□□ -1.83
RPS17BYDR447C NMD2P38798 1089 aaKnown RBP3.59□□□□□ -1.83
RPS17BYDR447C RVS167P39743 482 aaKnown RBP3.59□□□□□ -1.83
RPS17BYDR447C BRE2P43132 505 aa3.59□□□□□ -1.83
RPS17BYDR447C SAP155P43612 1002 aa3.59□□□□□ -1.83
RPS17BYDR447C YJL049WP47048 450 aa3.59□□□□□ -1.83
RPS17BYDR447C YGR053CP53234 283 aa3.59□□□□□ -1.83
RPS17BYDR447C PRI2P20457 528 aa3.58□□□□□ -1.84
RPS17BYDR447C GRX1P25373 110 aaKnown RBP3.58□□□□□ -1.84
RPS17BYDR447C YAF9P53930 226 aa3.58□□□□□ -1.84
RPS17BYDR447C DOS2P54858 310 aa3.58□□□□□ -1.84
RPS17BYDR447C PMT7Q06644 662 aa3.58□□□□□ -1.84
RPS17BYDR447C BDF2Q07442 638 aa3.58□□□□□ -1.84
RPS17BYDR447C CMR1Q12510 522 aaKnown RBP3.58□□□□□ -1.84
RPS17BYDR447C IDI1P15496 288 aa3.57□□□□□ -1.84
RPS17BYDR447C STI1P15705 589 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
RPS17BYDR447C YKL069WP36088 180 aa3.57□□□□□ -1.84
RPS17BYDR447C NCL1P38205 684 aaKnown RBP3.57□□□□□ -1.84
RPS17BYDR447C YER156CP40093 338 aaKnown RBP3.57□□□□□ -1.84
RPS17BYDR447C GNP1P48813 663 aa3.57□□□□□ -1.84
RPS17BYDR447C PPT1P53043 513 aa3.57□□□□□ -1.84
RPS17BYDR447C NAM8Q00539 523 aaKnown RBP3.57□□□□□ -1.84
RPS17BYDR447C RPN4Q03465 531 aa3.57□□□□□ -1.84
RPS17BYDR447C OPI10Q08202 246 aa3.57□□□□□ -1.84
RPS17BYDR447C RTT10Q08924 1013 aa3.57□□□□□ -1.84
RPS17BYDR447C CDC53Q12018 815 aaKnown RBP3.57□□□□□ -1.84
RPS17BYDR447C HEM13P11353 328 aaKnown RBP3.56□□□□□ -1.84
RPS17BYDR447C PRP5P21372 849 aaPredicted RBP3.56□□□□□ -1.84
RPS17BYDR447C NPR1P22211 790 aa3.56□□□□□ -1.84
RPS17BYDR447C PEX28P38848 579 aa3.56□□□□□ -1.84
RPS17BYDR447C SPF1P39986 1215 aaKnown RBP3.56□□□□□ -1.84
RPS17BYDR447C BUD6P41697 788 aa3.56□□□□□ -1.84
RPS17BYDR447C XKS1P42826 600 aa3.56□□□□□ -1.84
RPS17BYDR447C RSM26P47141 266 aa3.56□□□□□ -1.84
RPS17BYDR447C UBP2Q01476 1272 aa3.56□□□□□ -1.84
RPS17BYDR447C EEB1Q02891 456 aa3.56□□□□□ -1.84
RPS17BYDR447C TDA5Q06417 326 aaKnown RBP3.56□□□□□ -1.84
RPS17BYDR447C OPT2Q06593 877 aa3.56□□□□□ -1.84
RPS17BYDR447C MRL1Q06815 381 aa3.56□□□□□ -1.84
RPS17BYDR447C GLO4Q12320 285 aa3.56□□□□□ -1.84
RPS17BYDR447C FUS1P11710 512 aa3.55□□□□□ -1.84
RPS17BYDR447C PPG1P32838 368 aa3.55□□□□□ -1.84
RPS17BYDR447C SQT1P35184 431 aa3.55□□□□□ -1.84
RPS17BYDR447C PBP2P38151 413 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RPS17BYDR447C MSC7P38694 644 aa3.55□□□□□ -1.84
RPS17BYDR447C OSH7P38755 437 aa3.55□□□□□ -1.84
RPS17BYDR447C HUL5P53119 910 aa3.55□□□□□ -1.84
RPS17BYDR447C YGL140CP53120 1219 aa3.55□□□□□ -1.84
RPS17BYDR447C ALG12P53730 551 aa3.55□□□□□ -1.84
RPS17BYDR447C PEX13P80667 386 aa3.55□□□□□ -1.84
RPS17BYDR447C NOG1Q02892 647 aaKnown RBP3.55□□□□□ -1.84
RPS17BYDR447C MRP10O75012 95 aa3.54□□□□□ -1.84
RPS17BYDR447C CCP1P00431 361 aa3.54□□□□□ -1.84
RPS17BYDR447C HVG1P0CE11 249 aa3.54□□□□□ -1.84
RPS17BYDR447C RAD4P14736 754 aa3.54□□□□□ -1.84
RPS17BYDR447C SEC23P15303 768 aaKnown RBP3.54□□□□□ -1.84
RPS17BYDR447C BAS1P22035 811 aa3.54□□□□□ -1.84
RPS17BYDR447C MSH3P25336 1018 aa3.54□□□□□ -1.84
RPS17BYDR447C TFA2P36145 328 aa3.54□□□□□ -1.84
RPS17BYDR447C GLY1P37303 387 aaKnown RBP3.54□□□□□ -1.84
RPS17BYDR447C AMN1P38285 549 aaPredicted RBP3.54□□□□□ -1.84
RPS17BYDR447C HXT13P39924 564 aa3.54□□□□□ -1.84
RPS17BYDR447C INP51P40559 946 aaKnown RBP3.54□□□□□ -1.84
RPS17BYDR447C YJL181WP46987 611 aa3.54□□□□□ -1.84
RPS17BYDR447C HXT17P53631 564 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms