RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	YNG2	P38806	282 aa	Known RBP	7.83	□□□□□ -1.16
CDC1	YDR182W	ILV3	P39522	585 aa	Known RBP	7.83	□□□□□ -1.16
CDC1	YDR182W	SPO1	P53541	631 aa		7.83	□□□□□ -1.16
CDC1	YDR182W	SGD1	Q06132	899 aa		7.83	□□□□□ -1.16
CDC1	YDR182W	FLO1	P32768	1537 aa		7.83	□□□□□ -1.16
CDC1	YDR182W	PMA1	P05030	918 aa	Known RBP	7.82	□□□□□ -1.16
CDC1	YDR182W	ADP1	P25371	1049 aa		7.82	□□□□□ -1.16
CDC1	YDR182W	TPS3	P38426	1054 aa	Known RBP	7.82	□□□□□ -1.16
CDC1	YDR182W	PPM2	Q08282	695 aa		7.82	□□□□□ -1.16
CDC1	YDR182W	MAC1	P35192	417 aa		7.81	□□□□□ -1.16
CDC1	YDR182W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.81	□□□□□ -1.16	not detected
CDC1	YDR182W	VPS13	Q07878	3144 aa		7.81	□□□□□ -1.16
CDC1	YDR182W	MAK11	P20484	414 aa	Known RBP	7.81	□□□□□ -1.16
CDC1	YDR182W	SSF1	P38789	453 aa	Predicted RBP	7.81	□□□□□ -1.16
CDC1	YDR182W	TUB2	P02557	457 aa	Known RBP	7.79	□□□□□ -1.16
CDC1	YDR182W	GCD7	P32502	381 aa	Predicted RBP	7.79	□□□□□ -1.16
CDC1	YDR182W	YBL028C	P38202	106 aa		7.79	□□□□□ -1.16
CDC1	YDR182W	FUN12	P39730	1002 aa	Known RBP	7.79	□□□□□ -1.16
CDC1	YDR182W	PIF1	P07271	859 aa		7.78	□□□□□ -1.16
CDC1	YDR182W	IXR1	P33417	597 aa		7.78	□□□□□ -1.16
CDC1	YDR182W	GRX7	P38068	203 aa		7.78	□□□□□ -1.16
CDC1	YDR182W	KTR3	P38130	404 aa	Predicted RBP	7.78	□□□□□ -1.16
CDC1	YDR182W	ACA1	P39970	489 aa		7.78	□□□□□ -1.16
CDC1	YDR182W	SPR3	P41901	512 aa		7.78	□□□□□ -1.16
CDC1	YDR182W	YLR225C	Q05948	407 aa	Known RBP	7.78	□□□□□ -1.16
CDC1	YDR182W	BOI1	P38041	980 aa	Known RBP	7.77	□□□□□ -1.17
CDC1	YDR182W	PIP2	P52960	996 aa		7.77	□□□□□ -1.17
CDC1	YDR182W	RAD2	P07276	1031 aa		7.76	□□□□□ -1.17
CDC1	YDR182W	YDJ1	P25491	409 aa	Known RBP	7.76	□□□□□ -1.17
CDC1	YDR182W	ERG7	P38604	731 aa		7.75	□□□□□ -1.17
CDC1	YDR182W	YRB30	P53107	440 aa	Predicted RBP	7.75	□□□□□ -1.17
CDC1	YDR182W	YDL124W	Q07551	312 aa	Known RBP	7.75	□□□□□ -1.17
CDC1	YDR182W	PCL8	Q08966	492 aa		7.75	□□□□□ -1.17
CDC1	YDR182W	NCB2	Q92317	146 aa		7.75	□□□□□ -1.17
CDC1	YDR182W	FBP1	P09201	348 aa		7.75	□□□□□ -1.17
CDC1	YDR182W	OCT1	P35999	772 aa		7.75	□□□□□ -1.17
CDC1	YDR182W	HGH1	P48362	394 aa	Known RBP	7.75	□□□□□ -1.17
CDC1	YDR182W	PUF6	Q04373	656 aa	Known RBP	7.75	□□□□□ -1.17
CDC1	YDR182W	CYB2	P00175	591 aa		7.74	□□□□□ -1.17
CDC1	YDR182W	NOP2	P40991	618 aa	Known RBP	7.74	□□□□□ -1.17
CDC1	YDR182W	YGL242C	P53066	181 aa		7.74	□□□□□ -1.17
CDC1	YDR182W	KEL3	Q08979	651 aa	Predicted RBP	7.74	□□□□□ -1.17
CDC1	YDR182W	KIN1	P13185	1064 aa		7.73	□□□□□ -1.17
CDC1	YDR182W	MCD4	P36051	919 aa		7.73	□□□□□ -1.17
CDC1	YDR182W	YMR147W	P40218	223 aa	Known RBP	7.73	□□□□□ -1.17
CDC1	YDR182W	BDP1	P46678	594 aa		7.73	□□□□□ -1.17
CDC1	YDR182W	NET1	P47035	1189 aa		7.73	□□□□□ -1.17
CDC1	YDR182W	KRS1	P15180	591 aa	Known RBP	7.72	□□□□□ -1.17
CDC1	YDR182W	PAH1	P32567	862 aa		7.72	□□□□□ -1.17
CDC1	YDR182W	PSF2	P40359	213 aa		7.72	□□□□□ -1.17
CDC1	YDR182W	ALO1	P54783	526 aa	Known RBP	7.72	□□□□□ -1.17
CDC1	YDR182W	ULP1	Q02724	621 aa		7.72	□□□□□ -1.17
CDC1	YDR182W	CFT2	Q12102	859 aa	Predicted RBP	7.72	□□□□□ -1.17
CDC1	YDR182W	PDR18	P53756	1333 aa		7.71	□□□□□ -1.18
CDC1	YDR182W	NOT3	P06102	836 aa	Known RBP	7.71	□□□□□ -1.18
CDC1	YDR182W	NMD2	P38798	1089 aa	Known RBP	7.71	□□□□□ -1.18
CDC1	YDR182W	MSH4	P40965	878 aa	Predicted RBP	7.71	□□□□□ -1.18
CDC1	YDR182W	POL32	P47110	350 aa		7.71	□□□□□ -1.18
CDC1	YDR182W	ATG1	P53104	897 aa		7.71	□□□□□ -1.18
CDC1	YDR182W	LAP2	Q10740	671 aa		7.71	□□□□□ -1.18
CDC1	YDR182W	CDC60	P26637	1090 aa	Known RBP	7.7	□□□□□ -1.18
CDC1	YDR182W	COQ8	P27697	501 aa		7.7	□□□□□ -1.18
CDC1	YDR182W	MAL31	P38156	614 aa		7.7	□□□□□ -1.18
CDC1	YDR182W	LYS14	P40971	790 aa		7.7	□□□□□ -1.18
CDC1	YDR182W	YJL007C	P47080	104 aa		7.7	□□□□□ -1.18
CDC1	YDR182W	SNU71	P53207	620 aa	Known RBP	7.7	□□□□□ -1.18
CDC1	YDR182W	SRS2	P12954	1174 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	VMA1	P17255	1071 aa	Known RBP	7.69	□□□□□ -1.18
CDC1	YDR182W	PRS1	P32895	427 aa	Known RBP	7.69	□□□□□ -1.18
CDC1	YDR182W	CST26	P38226	397 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	VAB2	P40003	282 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	MLC1	P53141	149 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	PIB2	P53191	635 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	RMD1	Q03441	430 aa		7.69	□□□□□ -1.18
CDC1	YDR182W	PBY1	P38254	753 aa		7.68	□□□□□ -1.18
CDC1	YDR182W	IRC8	P47046	822 aa		7.68	□□□□□ -1.18
CDC1	YDR182W	RGA2	Q06407	1009 aa		7.68	□□□□□ -1.18
CDC1	YDR182W	MPH3	P0CE00	602 aa		7.68	□□□□□ -1.18
CDC1	YDR182W	ECM21	P38167	1117 aa	Known RBP	7.68	□□□□□ -1.18
CDC1	YDR182W	TIF4631	P39935	952 aa	Known RBP	7.68	□□□□□ -1.18
CDC1	YDR182W	YPL260W	Q08977	551 aa		7.68	□□□□□ -1.18
CDC1	YDR182W	PRE8	P23639	250 aa		7.67	□□□□□ -1.18
CDC1	YDR182W	KAR5	Q04746	504 aa		7.67	□□□□□ -1.18
CDC1	YDR182W	TY3A-G	Q12173	290 aa		7.67	□□□□□ -1.18
CDC1	YDR182W	TY3A-I	Q99219	290 aa		7.67	□□□□□ -1.18
CDC1	YDR182W	EDS1	P38073	919 aa		7.66	□□□□□ -1.18
CDC1	YDR182W	YHL050C	P38721	697 aa		7.66	□□□□□ -1.18
CDC1	YDR182W	VPS62	P53285	467 aa		7.66	□□□□□ -1.18
CDC1	YDR182W	YML037C	Q03703	340 aa		7.66	□□□□□ -1.18
CDC1	YDR182W	UBX5	Q06682	500 aa		7.66	□□□□□ -1.18
CDC1	YDR182W	SUB2	Q07478	446 aa	Known RBP	7.66	□□□□□ -1.18
CDC1	YDR182W	SRM1	P21827	482 aa		7.65	□□□□□ -1.18
CDC1	YDR182W	SPB4	P25808	606 aa	Predicted RBP	7.65	□□□□□ -1.18
CDC1	YDR182W	GEF1	P37020	779 aa		7.65	□□□□□ -1.18
CDC1	YDR182W	IOC3	P43596	787 aa		7.65	□□□□□ -1.18
CDC1	YDR182W	ERG12	P07277	443 aa		7.64	□□□□□ -1.19
CDC1	YDR182W	VID27	P40157	782 aa		7.64	□□□□□ -1.19
CDC1	YDR182W	BRE5	P53741	515 aa	Known RBP	7.64	□□□□□ -1.19
CDC1	YDR182W	CHS3	P29465	1165 aa		7.63	□□□□□ -1.19
CDC1	YDR182W	EUG1	P32474	517 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms