RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W TAH18Q12181 623 aa6.84□□□□□ -1.31
PGK1YCR012W ADR1P07248 1323 aa6.83□□□□□ -1.32
PGK1YCR012W UTP10P42945 1769 aaKnown RBP6.83□□□□□ -1.32
PGK1YCR012W HSP82P02829 709 aaKnown RBP6.83□□□□□ -1.32
PGK1YCR012W PIF1P07271 859 aa6.83□□□□□ -1.32
PGK1YCR012W PFK2P16862 959 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
PGK1YCR012W DIT2P21595 489 aa6.83□□□□□ -1.32
PGK1YCR012W BDF1P35817 686 aa6.83□□□□□ -1.32
PGK1YCR012W YKR075CP36155 307 aa6.83□□□□□ -1.32
PGK1YCR012W HXK1P04806 485 aaKnown RBP6.82□□□□□ -1.32
PGK1YCR012W MPH3P0CE00 602 aa6.82□□□□□ -1.32
PGK1YCR012W RGP1P16664 663 aa6.82□□□□□ -1.32
PGK1YCR012W CRG1P38892 291 aaRIP-Chip data6.82□□□□□ -1.32not detected
PGK1YCR012W CIN4P39110 191 aa6.82□□□□□ -1.32
PGK1YCR012W EST2Q06163 884 aa6.82□□□□□ -1.32
PGK1YCR012W SPN1Q06505 410 aaPredicted RBP6.82□□□□□ -1.32
PGK1YCR012W MSB4Q12317 492 aa6.82□□□□□ -1.32
PGK1YCR012W PET111P08468 800 aa6.81□□□□□ -1.32
PGK1YCR012W CBP3P21560 335 aa6.81□□□□□ -1.32
PGK1YCR012W OSW7P43611 510 aa6.81□□□□□ -1.32
PGK1YCR012W YCG1Q06680 1035 aa6.81□□□□□ -1.32
PGK1YCR012W TFC8Q12308 588 aa6.81□□□□□ -1.32
PGK1YCR012W POM152P39685 1337 aa6.8□□□□□ -1.32
PGK1YCR012W RIM15P43565 1770 aa6.8□□□□□ -1.32
PGK1YCR012W RPL22AP05749 121 aaKnown RBP6.8□□□□□ -1.32
PGK1YCR012W HCA4P20448 770 aaKnown RBP6.8□□□□□ -1.32
PGK1YCR012W MRC1P25588 1096 aa6.8□□□□□ -1.32
PGK1YCR012W MCM4P30665 933 aaKnown RBP6.8□□□□□ -1.32
PGK1YCR012W RER2P35196 286 aa6.8□□□□□ -1.32
PGK1YCR012W RPG1P38249 964 aaKnown RBP6.8□□□□□ -1.32
PGK1YCR012W VPS75P53853 264 aa6.8□□□□□ -1.32
PGK1YCR012W FAR11P53917 953 aa6.8□□□□□ -1.32
PGK1YCR012W KAR5Q04746 504 aa6.8□□□□□ -1.32
PGK1YCR012W COG4Q06096 861 aa6.8□□□□□ -1.32
PGK1YCR012W CTI6Q08923 506 aa6.8□□□□□ -1.32
PGK1YCR012W CDC15P27636 974 aa6.79□□□□□ -1.32
PGK1YCR012W PSY4P38193 441 aa6.79□□□□□ -1.32
PGK1YCR012W RPN10P38886 268 aaKnown RBP6.79□□□□□ -1.32
PGK1YCR012W RRP8P38961 392 aaKnown RBP6.79□□□□□ -1.32
PGK1YCR012W HAL5P38970 855 aaKnown RBP6.79□□□□□ -1.32
PGK1YCR012W IRC8P47046 822 aa6.79□□□□□ -1.32
PGK1YCR012W PRP31P49704 494 aaPredicted RBP6.79□□□□□ -1.32
PGK1YCR012W SRC1Q03707 834 aa6.79□□□□□ -1.32
PGK1YCR012W HAT1Q12341 374 aa6.79□□□□□ -1.32
PGK1YCR012W PET123P17558 318 aa6.78□□□□□ -1.32
PGK1YCR012W AKR1P39010 764 aa6.78□□□□□ -1.32
PGK1YCR012W RAD26P40352 1085 aa6.78□□□□□ -1.32
PGK1YCR012W SMC3P47037 1230 aa6.78□□□□□ -1.32
PGK1YCR012W HCR1Q05775 265 aaKnown RBP6.78□□□□□ -1.32
PGK1YCR012W PPM2Q08282 695 aa6.78□□□□□ -1.32
PGK1YCR012W TMA16Q08687 178 aa6.78□□□□□ -1.32
PGK1YCR012W SAC6P32599 642 aaKnown RBP6.77□□□□□ -1.33
PGK1YCR012W NPL4P33755 580 aa6.77□□□□□ -1.33
PGK1YCR012W BMH2P34730 273 aaKnown RBP6.77□□□□□ -1.33
PGK1YCR012W GLO3P38682 493 aaKnown RBP6.77□□□□□ -1.33
PGK1YCR012W CUE3P53137 624 aaKnown RBP6.77□□□□□ -1.33
PGK1YCR012W GFD1Q04839 188 aaKnown RBP6.77□□□□□ -1.33
PGK1YCR012W APL4Q12028 832 aa6.77□□□□□ -1.33
PGK1YCR012W DCS2Q12123 353 aa6.77□□□□□ -1.33
PGK1YCR012W BUG1Q12191 341 aa6.77□□□□□ -1.33
PGK1YCR012W NYV1Q12255 253 aa6.77□□□□□ -1.33
PGK1YCR012W PDC1P06169 563 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W COQ1P18900 473 aa6.76□□□□□ -1.33
PGK1YCR012W PHO13P19881 312 aa6.76□□□□□ -1.33
PGK1YCR012W SWI4P25302 1093 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W NGR1P32831 672 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W SAP190P36123 1033 aa6.76□□□□□ -1.33
PGK1YCR012W GEF1P37020 779 aa6.76□□□□□ -1.33
PGK1YCR012W ADE17P38009 592 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W PCH2P38126 564 aa6.76□□□□□ -1.33
PGK1YCR012W CAJ1P39101 391 aa6.76□□□□□ -1.33
PGK1YCR012W MGA2P40578 1113 aa6.76□□□□□ -1.33
PGK1YCR012W MSH4P40965 878 aaPredicted RBP6.76□□□□□ -1.33
PGK1YCR012W IOC3P43596 787 aa6.76□□□□□ -1.33
PGK1YCR012W STR2P47164 639 aa6.76□□□□□ -1.33
PGK1YCR012W APT1P49435 187 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W YGR130CP53278 816 aa6.76□□□□□ -1.33
PGK1YCR012W UTP13Q05946 817 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W GET3Q12154 354 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W NOP14Q99207 810 aaKnown RBP6.76□□□□□ -1.33
PGK1YCR012W CDC6P09119 513 aa6.75□□□□□ -1.33
PGK1YCR012W STE11P23561 717 aa6.75□□□□□ -1.33
PGK1YCR012W MSH3P25336 1018 aa6.75□□□□□ -1.33
PGK1YCR012W SPB4P25808 606 aaPredicted RBP6.75□□□□□ -1.33
PGK1YCR012W URA1P28272 314 aaPredicted RBP6.75□□□□□ -1.33
PGK1YCR012W BMH1P29311 267 aaKnown RBP6.75□□□□□ -1.33
PGK1YCR012W ASF1P32447 279 aa6.75□□□□□ -1.33
PGK1YCR012W UFD2P54860 961 aa6.75□□□□□ -1.33
PGK1YCR012W CSC1Q06538 782 aa6.75□□□□□ -1.33
PGK1YCR012W GIN4Q12263 1142 aa6.75□□□□□ -1.33
PGK1YCR012W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
PGK1YCR012W NBL1Q3E7Y6 73 aa6.75□□□□□ -1.33
PGK1YCR012W CYB2P00175 591 aa6.74□□□□□ -1.33
PGK1YCR012W UBC1P21734 215 aaKnown RBP6.74□□□□□ -1.33
PGK1YCR012W RRP43P25359 394 aaPredicted RBP6.74□□□□□ -1.33
PGK1YCR012W GRX7P38068 203 aa6.74□□□□□ -1.33
PGK1YCR012W NUG1P40010 520 aaKnown RBP6.74□□□□□ -1.33
PGK1YCR012W EAF6P47128 113 aa6.74□□□□□ -1.33
PGK1YCR012W ALF1P53904 254 aa6.74□□□□□ -1.33
PGK1YCR012W HPC2Q01448 625 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms