RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Idi2Q8BFZ6 227 aa17.48■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Atxn3Q9CVD2 355 aa17.48■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Map4k4P97820 1233 aaKnown RBP17.47■□□□□ 0.39
Rnf4-204ENSMUST00000182047 GphnQ8BUV3 769 aaKnown RBP17.46■□□□□ 0.39
Rnf4-204ENSMUST00000182047 Dbr1Q923B1 550 aa17.46■□□□□ 0.39
Rnf4-204ENSMUST00000182047 PtpruB1AUH1 1446 aa17.45■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Sox12Q04890 314 aa17.45■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Apbb1Q9QXJ1 710 aa17.45■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Pik3r4Q8VD65 1358 aa17.45■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Slc12a5Q91V14 1138 aa17.43■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Iqsec2Q5DU25 1478 aa17.43■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Rreb1Q3UH06 1700 aaKnown RBP17.42■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Tnrc6bQ8BKI2 1810 aaKnown RBP17.42■□□□□ 0.38
Rnf4-204ENSMUST00000182047 CatipB9EKE5 520 aa17.42■□□□□ 0.38
Rnf4-204ENSMUST00000182047 DaxxO35613 739 aa17.42■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Arap3Q8R5G7 1538 aa17.42■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Ralbp1Q62172 648 aa17.41■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Plekhh1Q80TI1 1356 aa17.41■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Bcl9Q9D219 1425 aa17.41■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Topaz1E5FYH1 1653 aa17.4■□□□□ 0.38
Rnf4-204ENSMUST00000182047 4933416C03RikQ3V063 378 aa17.4■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Hsp90aa1P07901 733 aaKnown RBP17.4■□□□□ 0.38
Rnf4-204ENSMUST00000182047 Idi1P58044 227 aa17.39■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Tmem94Q7TSH8 1360 aa17.39■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Gm10563F6WIE4 79 aa17.39■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Trim28Q62318 834 aa17.38■□□□□ 0.37
Rnf4-204ENSMUST00000182047 PalmQ9Z0P4 383 aa17.38■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Ttc41Q692V3 1318 aa17.38■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Chd4Q6PDQ2 1915 aaKnown RBP17.37■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Ttll13A4Q9F6 804 aa17.37■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Dusp27Q148W8 1138 aa17.37■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Rwdd1Q9CQK7 243 aa17.37■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Iqcf3Q9D498 203 aa17.37■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Uhrf1bp1lA2RSJ4 1457 aa17.36■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Alpk3Q924C5 1678 aa17.35■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Prkrip1Q9CWV6 186 aaKnown RBP17.35■□□□□ 0.37
Rnf4-204ENSMUST00000182047 D430041D05RikF6ZGR6 1678 aa17.35■□□□□ 0.37
Rnf4-204ENSMUST00000182047 N4bp2F8VQG7 1678 aaKnown RBP17.35■□□□□ 0.37
Rnf4-204ENSMUST00000182047 CanxP35564 591 aaKnown RBP17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Sirt1Q923E4 737 aa17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Trim26Q99PN3 545 aa17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Mapk8ip3Q9ESN9 1337 aa17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Kif20bQ80WE4 1774 aaKnown RBP17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Polr3glQ8R0C0 218 aa17.34■□□□□ 0.37
Rnf4-204ENSMUST00000182047 Kif1aP33173 1695 aa17.33■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Abcc10Q8R4P9 1501 aa17.33■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Ppp1r15aP17564 657 aa17.31■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Mcm10Q0VBD2 885 aa17.31■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Ksr2Q3UVC0 959 aa17.31■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Plin1Q8CGN5 517 aa17.31■□□□□ 0.36
Rnf4-204ENSMUST00000182047 C5P06684 1680 aa17.3■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Q4VA45 678 aa17.3■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Als2Q920R0 1651 aa17.29■□□□□ 0.36
Rnf4-204ENSMUST00000182047 ArxO35085 564 aa17.28■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Cavin4A2AMM0 362 aa17.28■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Rsph6aQ8CDR2 708 aa17.28■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Ap3b2Q9JME5 1082 aa17.27■□□□□ 0.36
Rnf4-204ENSMUST00000182047 Senp3Q9EP97 568 aaKnown RBP17.27■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Nckap5lQ6GQX2 1323 aa17.26■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Rims2Q9EQZ7 1530 aa17.26■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Astn2Q80Z10 1352 aa17.26■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Slc35g1Q8BY79 368 aa17.26■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Lmtk3Q5XJV6 1424 aa17.26■□□□□ 0.35
Rnf4-204ENSMUST00000182047 C3P01027 1663 aa17.25■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Rimbp3Q3V0F0 1606 aa17.25■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Pank1Q8K4K6 548 aa17.25■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Sart3Q9JLI8 962 aaKnown RBP17.25■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Pik3c2aQ61194 1686 aa17.25■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Eif4a2P10630 407 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Znf335A2A5K6 1337 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 MpripP97434 1024 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Tns3Q5SSZ5 1440 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 NalcnQ8BXR5 1738 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Gm21190A0A0G2JGJ6 266 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Fchsd2Q3USJ8 740 aa17.24■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Hoxb7P09024 217 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Rangap1P46061 589 aaKnown RBP17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Tspyl2Q7TQI8 677 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Dennd6aQ8BH65 605 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Frmpd2A0A140LI67 1392 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Amer1Q7TS75 1132 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Chmp5Q9D7S9 219 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Cabp2Q9JLK4 216 aa17.23■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Med1Q925J9 1575 aa17.22■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Gtf3c3Q3TMP1 882 aa17.22■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Cabp4Q8VHC5 271 aa17.22■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Nlgn1Q99K10 843 aa17.22■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Mon2Q80TL7 1715 aa17.22■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Swt1Q9DBQ9 907 aa17.21■□□□□ 0.35
Rnf4-204ENSMUST00000182047 Thsd7aQ69ZU6 1645 aa17.21■□□□□ 0.35
Rnf4-204ENSMUST00000182047 4930567H17RikQ3V0K5 233 aa17.2■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Uhrf1bp1B2KF50 1429 aa17.2■□□□□ 0.34
Rnf4-204ENSMUST00000182047 FancaQ9JL70 1439 aa17.2■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Cdk12Q14AX6 1484 aaKnown RBP17.2■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ccar1Q8CH18 1146 aaKnown RBP17.2■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Irx3P81067 507 aa17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 CemipQ8BI06 1361 aa17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Sipa1l2Q80TE4 1722 aa17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Rbm25B2RY56 838 aaKnown RBP17.19■□□□□ 0.34
Rnf4-204ENSMUST00000182047 Ncbp3Q8BZR9 615 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms