RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 NischQ80TM9 1593 aa27.13■■□□□ 1.93
Rnf4-204ENSMUST00000182047 Gm35339A0A140LHH9 1649 aa26.81■■□□□ 1.88
Rnf4-204ENSMUST00000182047 Abcc9P70170 1546 aa26.29■■□□□ 1.8
Rnf4-204ENSMUST00000182047 Abcc8B2RUS7 1588 aa25.89■■□□□ 1.73
Rnf4-204ENSMUST00000182047 Rhox8Q6VSS7 320 aa24.75■■□□□ 1.55
Rnf4-204ENSMUST00000182047 ScribQ80U72 1612 aa24.42■■□□□ 1.5
Rnf4-204ENSMUST00000182047 Dcaf1Q80TR8 1506 aa23.94■■□□□ 1.42
Rnf4-204ENSMUST00000182047 Kdm5dQ62240 1548 aa23.85■■□□□ 1.41
Rnf4-204ENSMUST00000182047 Rb1cc1Q9ESK9 1588 aa23.74■■□□□ 1.39
Rnf4-204ENSMUST00000182047 Rtl1Q7M732 1744 aa23.7■■□□□ 1.38
Rnf4-204ENSMUST00000182047 NacadQ5SWP3 1504 aa23.66■■□□□ 1.38
Rnf4-204ENSMUST00000182047 Baz1aO88379 1555 aa23.41■■□□□ 1.34
Rnf4-204ENSMUST00000182047 Ccdc180J3QNE4 1664 aa23.29■■□□□ 1.32
Rnf4-204ENSMUST00000182047 Sycp2Q9CUU3 1500 aa23.18■■□□□ 1.3
Rnf4-204ENSMUST00000182047 Zcchc6Q5BLK4 1491 aaKnown RBP23.17■■□□□ 1.3
Rnf4-204ENSMUST00000182047 Ccdc136Q3TVA9 1136 aa23.06■■□□□ 1.28
Rnf4-204ENSMUST00000182047 Crybg2B7ZCC2 1516 aa22.99■■□□□ 1.27
Rnf4-204ENSMUST00000182047 Smarca2Q6DIC0 1577 aa22.85■■□□□ 1.25
Rnf4-204ENSMUST00000182047 BicraF8VPZ9 1578 aa22.78■■□□□ 1.24
Rnf4-204ENSMUST00000182047 Cecr2E9Q2Z1 1453 aa22.53■■□□□ 1.2
Rnf4-204ENSMUST00000182047 Trim41Q5NCC3 630 aa22.45■■□□□ 1.18
Rnf4-204ENSMUST00000182047 Brd4Q9ESU6 1400 aaKnown RBP22.25■■□□□ 1.15
Rnf4-204ENSMUST00000182047 HrcG5E8J6 738 aa22.23■■□□□ 1.15
Rnf4-204ENSMUST00000182047 Synj1Q8CHC4 1574 aa22.2■■□□□ 1.14
Rnf4-204ENSMUST00000182047 CftrP26361 1476 aa22.09■■□□□ 1.13
Rnf4-204ENSMUST00000182047 Smarca4Q3TKT4 1613 aaKnown RBP22.08■■□□□ 1.12
Rnf4-204ENSMUST00000182047 Cngb1E1AZ71 1325 aa22.06■■□□□ 1.12
Rnf4-204ENSMUST00000182047 Ehmt2Q9Z148 1263 aaKnown RBP21.99■■□□□ 1.11
Rnf4-204ENSMUST00000182047 Esf1Q3V1V3 845 aaKnown RBP21.95■■□□□ 1.1
Rnf4-204ENSMUST00000182047 Cttnbp2B9EJA2 1648 aa21.95■■□□□ 1.1
Rnf4-204ENSMUST00000182047 Rpgrip1Q9EPQ2 1331 aa21.9■■□□□ 1.1
Rnf4-204ENSMUST00000182047 Golga3P55937 1487 aa21.9■■□□□ 1.1
Rnf4-204ENSMUST00000182047 Iqgap2Q3UQ44 1575 aa21.86■■□□□ 1.09
Rnf4-204ENSMUST00000182047 Chic1Q8CBW7 227 aa21.83■■□□□ 1.08
Rnf4-204ENSMUST00000182047 Atad2bE9Q166 1460 aaKnown RBP21.82■■□□□ 1.08
Rnf4-204ENSMUST00000182047 Rsf1E9PWW9 1441 aaKnown RBP21.81■■□□□ 1.08
Rnf4-204ENSMUST00000182047 Pds5bQ4VA53 1446 aaKnown RBP21.79■■□□□ 1.08
Rnf4-204ENSMUST00000182047 Cep164Q5DU05 1446 aa21.78■■□□□ 1.08
Rnf4-204ENSMUST00000182047 Ccdc88bQ4QRL3 1481 aa21.76■■□□□ 1.07
Rnf4-204ENSMUST00000182047 Top2bQ64511 1612 aa21.7■■□□□ 1.07
Rnf4-204ENSMUST00000182047 Acin1Q9JIX8 1338 aaKnown RBP21.63■■□□□ 1.05
Rnf4-204ENSMUST00000182047 Cc2d2aQ8CFW7 1633 aa21.58■■□□□ 1.05
Rnf4-204ENSMUST00000182047 Gab3Q8BSM5 595 aa21.58■■□□□ 1.05
Rnf4-204ENSMUST00000182047 Frmpd1A2AKB4 1549 aa21.51■■□□□ 1.03
Rnf4-204ENSMUST00000182047 Wdr62Q3U3T8 1523 aa21.48■■□□□ 1.03
Rnf4-204ENSMUST00000182047 Ercc6F8VPZ5 1481 aa21.41■■□□□ 1.02
Rnf4-204ENSMUST00000182047 Fmn1Q05860 1466 aa21.39■■□□□ 1.01
Rnf4-204ENSMUST00000182047 Unc13aQ4KUS2 1712 aa21.26■□□□□ 0.99
Rnf4-204ENSMUST00000182047 Thoc2B1AZI6 1594 aaKnown RBP21.24■□□□□ 0.99
Rnf4-204ENSMUST00000182047 Top2aQ01320 1528 aaKnown RBP21.23■□□□□ 0.99
Rnf4-204ENSMUST00000182047 TnnQ80Z71 1560 aa21.18■□□□□ 0.98
Rnf4-204ENSMUST00000182047 Kif15Q6P9L6 1387 aa21.15■□□□□ 0.98
Rnf4-204ENSMUST00000182047 Pcgf6Q99NA9 353 aa21.12■□□□□ 0.97
Rnf4-204ENSMUST00000182047 Lamc3Q9R0B6 1581 aa21.12■□□□□ 0.97
Rnf4-204ENSMUST00000182047 Il27Q8K3I6 234 aa21.08■□□□□ 0.97
Rnf4-204ENSMUST00000182047 Phldb1Q6PDH0 1371 aaKnown RBP21.07■□□□□ 0.96
Rnf4-204ENSMUST00000182047 Rapgef2Q8CHG7 1496 aa21.05■□□□□ 0.96
Rnf4-204ENSMUST00000182047 Ubl4bQ9CQ84 188 aa21.01■□□□□ 0.95
Rnf4-204ENSMUST00000182047 Npm2Q80W85 207 aa20.96■□□□□ 0.95
Rnf4-204ENSMUST00000182047 Fam135aQ6NS59 1506 aa20.94■□□□□ 0.94
Rnf4-204ENSMUST00000182047 Camsap1A2AHC3 1581 aa20.92■□□□□ 0.94
Rnf4-204ENSMUST00000182047 Myt1lP97500 1187 aa20.92■□□□□ 0.94
Rnf4-204ENSMUST00000182047 Cep162Q6ZQ06 1403 aa20.92■□□□□ 0.94
Rnf4-204ENSMUST00000182047 Dnajc5bQ9CQ94 199 aa20.91■□□□□ 0.94
Rnf4-204ENSMUST00000182047 Cux2P70298 1426 aa20.89■□□□□ 0.93
Rnf4-204ENSMUST00000182047 PtprkP35822 1457 aa20.88■□□□□ 0.93
Rnf4-204ENSMUST00000182047 Ccdc18Q640L5 1455 aa20.84■□□□□ 0.93
Rnf4-204ENSMUST00000182047 Supt5hO55201 1082 aaKnown RBP20.77■□□□□ 0.92
Rnf4-204ENSMUST00000182047 Eif4g1Q6NZJ6 1600 aaKnown RBP20.76■□□□□ 0.91
Rnf4-204ENSMUST00000182047 Npm1Q61937 292 aaKnown RBP20.76■□□□□ 0.91
Rnf4-204ENSMUST00000182047 Grin2bQ01097 1482 aa20.75■□□□□ 0.91
Rnf4-204ENSMUST00000182047 Shroom4Q1W617 1475 aa20.72■□□□□ 0.91
Rnf4-204ENSMUST00000182047 NrkQ9R0G8 1455 aa20.71■□□□□ 0.91
Rnf4-204ENSMUST00000182047 Arhgap35Q91YM2 1499 aa20.71■□□□□ 0.91
Rnf4-204ENSMUST00000182047 Zeb1Q64318 1117 aa20.62■□□□□ 0.89
Rnf4-204ENSMUST00000182047 LrpprcQ6PB66 1392 aaKnown RBP20.62■□□□□ 0.89
Rnf4-204ENSMUST00000182047 PogzQ8BZH4 1409 aaKnown RBP20.55■□□□□ 0.88
Rnf4-204ENSMUST00000182047 Baz1bQ9Z277 1479 aa20.55■□□□□ 0.88
Rnf4-204ENSMUST00000182047 Clip1Q922J3 1391 aa20.54■□□□□ 0.88
Rnf4-204ENSMUST00000182047 Duox2A2AQ99 1517 aa20.54■□□□□ 0.88
Rnf4-204ENSMUST00000182047 Mrc2Q64449 1479 aa20.54■□□□□ 0.88
Rnf4-204ENSMUST00000182047 Dhx29Q6PGC1 1365 aaKnown RBP20.51■□□□□ 0.87
Rnf4-204ENSMUST00000182047 Mroh2bQ7M6Y6 1581 aa20.51■□□□□ 0.87
Rnf4-204ENSMUST00000182047 UbtfP25976 765 aaKnown RBP20.49■□□□□ 0.87
Rnf4-204ENSMUST00000182047 Efcab5A0JP43 1406 aa20.49■□□□□ 0.87
Rnf4-204ENSMUST00000182047 Map3k1P53349 1493 aa20.48■□□□□ 0.87
Rnf4-204ENSMUST00000182047 Kif21aQ9QXL2 1672 aa20.47■□□□□ 0.87
Rnf4-204ENSMUST00000182047 Plekhg3Q4VAC9 1341 aa20.45■□□□□ 0.86
Rnf4-204ENSMUST00000182047 Ap3b1Q9Z1T1 1105 aa20.44■□□□□ 0.86
Rnf4-204ENSMUST00000182047 Mier1Q5UAK0 511 aa20.43■□□□□ 0.86
Rnf4-204ENSMUST00000182047 Samd9lQ69Z37 1561 aa20.42■□□□□ 0.86
Rnf4-204ENSMUST00000182047 Eea1Q8BL66 1411 aa20.39■□□□□ 0.85
Rnf4-204ENSMUST00000182047 Arap1Q4LDD4 1452 aa20.38■□□□□ 0.85
Rnf4-204ENSMUST00000182047 Setd5Q5XJV7 1441 aa20.37■□□□□ 0.85
Rnf4-204ENSMUST00000182047 Crocc2F6XLV1 1638 aa20.36■□□□□ 0.85
Rnf4-204ENSMUST00000182047 Rad54l2Q99NG0 1466 aa20.35■□□□□ 0.85
Rnf4-204ENSMUST00000182047 Neurod1Q60867 357 aa20.34■□□□□ 0.85
Rnf4-204ENSMUST00000182047 AqrQ8CFQ3 1481 aaKnown RBP20.31■□□□□ 0.84
Rnf4-204ENSMUST00000182047 SynmQ70IV5 1561 aa20.29■□□□□ 0.84
Rnf4-204ENSMUST00000182047 Carmil1Q6EDY6 1374 aa20.29■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 128.4 ms