RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Smg6P61406 1418 aaKnown RBP27.03■■□□□ 1.92
Lig3-209ENSMUST00000173009 Gm21190A0A0G2JGJ6 266 aa27.02■■□□□ 1.92
Lig3-209ENSMUST00000173009 Gimap6Q8K349 305 aa27.02■■□□□ 1.92
Lig3-209ENSMUST00000173009 Nlgn1Q99K10 843 aa27.02■■□□□ 1.92
Lig3-209ENSMUST00000173009 Ybx3Q9JKB3 361 aaKnown RBP27.01■■□□□ 1.91
Lig3-209ENSMUST00000173009 IbtkQ6ZPR6 1352 aaKnown RBP27■■□□□ 1.91
Lig3-209ENSMUST00000173009 Ncoa4Q5U4H9 625 aa26.99■■□□□ 1.91
Lig3-209ENSMUST00000173009 Slc5a4bQ91ZP4 660 aa26.99■■□□□ 1.91
Lig3-209ENSMUST00000173009 Chd4Q6PDQ2 1915 aaKnown RBP26.99■■□□□ 1.91
Lig3-209ENSMUST00000173009 Col16a1Q8BLX7 1580 aa26.98■■□□□ 1.91
Lig3-209ENSMUST00000173009 Znf526Q8BI66 675 aa26.98■■□□□ 1.91
Lig3-209ENSMUST00000173009 Birc3O08863 600 aa26.97■■□□□ 1.91
Lig3-209ENSMUST00000173009 Dzip1Q8BMD2 852 aa26.97■■□□□ 1.91
Lig3-209ENSMUST00000173009 Cadps2Q8BYR5 1297 aa26.97■■□□□ 1.91
Lig3-209ENSMUST00000173009 Nckap5lQ6GQX2 1323 aa26.97■■□□□ 1.91
Lig3-209ENSMUST00000173009 Cabp4Q8VHC5 271 aa26.97■■□□□ 1.91
Lig3-209ENSMUST00000173009 Smim5Q8BT42 78 aa26.95■■□□□ 1.9
Lig3-209ENSMUST00000173009 Wwc2Q6NXJ0 1187 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 Ppp2r1aQ76MZ3 589 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 CemipQ8BI06 1361 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 Atp7bQ64446 1462 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 Bcl2l12Q9D3J3 255 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 PaskQ8CEE6 1383 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 Ncapd2Q8K2Z4 1392 aa26.94■■□□□ 1.9
Lig3-209ENSMUST00000173009 Acsbg1Q99PU5 721 aa26.93■■□□□ 1.9
Lig3-209ENSMUST00000173009 Cdk12Q14AX6 1484 aaKnown RBP26.93■■□□□ 1.9
Lig3-209ENSMUST00000173009 Cald1E9QA15 768 aaKnown RBP26.92■■□□□ 1.9
Lig3-209ENSMUST00000173009 Atp10bB1AWN4 1474 aa26.92■■□□□ 1.9
Lig3-209ENSMUST00000173009 Anp32bQ9EST5 272 aaKnown RBP26.91■■□□□ 1.9
Lig3-209ENSMUST00000173009 Zfp142G5E869 1843 aa26.9■■□□□ 1.9
Lig3-209ENSMUST00000173009 Exoc6Q8R313 802 aa26.89■■□□□ 1.9
Lig3-209ENSMUST00000173009 Hoxb7P09024 217 aa26.88■■□□□ 1.89
Lig3-209ENSMUST00000173009 Rab3gap2Q8BMG7 1366 aa26.87■■□□□ 1.89
Lig3-209ENSMUST00000173009 Kcnh5Q920E3 988 aa26.85■■□□□ 1.89
Lig3-209ENSMUST00000173009 Ano8Q6PB70 1060 aa26.84■■□□□ 1.89
Lig3-209ENSMUST00000173009 Abca15E9PWH4 1668 aa26.84■■□□□ 1.89
Lig3-209ENSMUST00000173009 Ubr1O70481 1757 aa26.84■■□□□ 1.89
Lig3-209ENSMUST00000173009 Zmym3Q9JLM4 1370 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Marf1Q8BJ34 1730 aaKnown RBP26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Gm21698A0A087WQP8 267 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Gm21671G3UY31 267 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Rpgrip1lQ8CG73 1264 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Ddx54Q8K4L0 874 aaKnown RBP26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Nlrp6Q91WS2 869 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 FancaQ9JL70 1439 aa26.82■■□□□ 1.88
Lig3-209ENSMUST00000173009 Scaf1Q5U4C3 1256 aaKnown RBP26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Ggt6Q6PDE7 497 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Nyap1Q6PFX7 833 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Dnajc10Q9DC23 793 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Txnrd1Q9JMH6 613 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Fam135bQ9DAI6 1403 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Arhgef1Q61210 920 aaKnown RBP26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 Q7TT23 1179 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 TatQ8QZR1 454 aa26.81■■□□□ 1.88
Lig3-209ENSMUST00000173009 ZgpatQ8VDM1 511 aa26.79■■□□□ 1.88
Lig3-209ENSMUST00000173009 P2rx7Q9Z1M0 595 aa26.79■■□□□ 1.88
Lig3-209ENSMUST00000173009 Nid2O88322 1403 aa26.78■■□□□ 1.88
Lig3-209ENSMUST00000173009 Fmnl2A2APV2 1086 aa26.78■■□□□ 1.88
Lig3-209ENSMUST00000173009 Cdhr2E9Q7P9 1308 aa26.78■■□□□ 1.88
Lig3-209ENSMUST00000173009 Tet3Q8BG87 1668 aa26.78■■□□□ 1.88
Lig3-209ENSMUST00000173009 Trim28Q62318 834 aa26.77■■□□□ 1.88
Lig3-209ENSMUST00000173009 Map2P20357 1828 aa26.77■■□□□ 1.88
Lig3-209ENSMUST00000173009 Tmem132eQ6IEE6 982 aa26.76■■□□□ 1.88
Lig3-209ENSMUST00000173009 Lrrc59Q922Q8 307 aaKnown RBP26.76■■□□□ 1.88
Lig3-209ENSMUST00000173009 HdgfP51859 237 aaKnown RBP26.76■■□□□ 1.87
Lig3-209ENSMUST00000173009 Nfat5Q9WV30 1534 aa26.75■■□□□ 1.87
Lig3-209ENSMUST00000173009 Mdc1Q5PSV9 1707 aa26.75■■□□□ 1.87
Lig3-209ENSMUST00000173009 Bcl9lQ67FY2 1494 aa26.75■■□□□ 1.87
Lig3-209ENSMUST00000173009 Mrs2Q5NCE8 434 aa26.74■■□□□ 1.87
Lig3-209ENSMUST00000173009 Tex14Q7M6U3 1450 aa26.74■■□□□ 1.87
Lig3-209ENSMUST00000173009 Sema6bO54951 886 aa26.74■■□□□ 1.87
Lig3-209ENSMUST00000173009 Scn7aB1AYL1 1681 aa26.73■■□□□ 1.87
Lig3-209ENSMUST00000173009 TnrQ8BYI9 1358 aa26.73■■□□□ 1.87
Lig3-209ENSMUST00000173009 Card10P58660 1021 aa26.72■■□□□ 1.87
Lig3-209ENSMUST00000173009 Siglec1Q62230 1695 aa26.72■■□□□ 1.87
Lig3-209ENSMUST00000173009 Hoxc9P09633 260 aa26.71■■□□□ 1.87
Lig3-209ENSMUST00000173009 Ppp1r15aP17564 657 aa26.71■■□□□ 1.87
Lig3-209ENSMUST00000173009 PnisrA2AJT4 805 aaKnown RBP26.7■■□□□ 1.86
Lig3-209ENSMUST00000173009 Amotl2Q8K371 772 aa26.7■■□□□ 1.86
Lig3-209ENSMUST00000173009 Slc12a5Q91V14 1138 aa26.69■■□□□ 1.86
Lig3-209ENSMUST00000173009 Pcgf6Q99NA9 353 aa26.68■■□□□ 1.86
Lig3-209ENSMUST00000173009 Rad17Q6NXW6 688 aa26.67■■□□□ 1.86
Lig3-209ENSMUST00000173009 PtprvP70289 1705 aa26.67■■□□□ 1.86
Lig3-209ENSMUST00000173009 Nol11Q8BJW5 723 aaKnown RBP26.66■■□□□ 1.86
Lig3-209ENSMUST00000173009 Rtl5Q5DTT4 599 aa26.66■■□□□ 1.86
Lig3-209ENSMUST00000173009 Cntnap1O54991 1385 aa26.66■■□□□ 1.86
Lig3-209ENSMUST00000173009 Slit2Q9R1B9 1521 aa26.65■■□□□ 1.86
Lig3-209ENSMUST00000173009 MypopQ8R4U1 393 aa26.65■■□□□ 1.86
Lig3-209ENSMUST00000173009 Uhrf1bp1lA2RSJ4 1457 aa26.64■■□□□ 1.86
Lig3-209ENSMUST00000173009 Eif4a2P10630 407 aa26.64■■□□□ 1.86
Lig3-209ENSMUST00000173009 Ccne1Q61457 408 aa26.64■■□□□ 1.86
Lig3-209ENSMUST00000173009 Robo1O89026 1612 aa26.64■■□□□ 1.86
Lig3-209ENSMUST00000173009 Rsph6aQ8CDR2 708 aa26.63■■□□□ 1.85
Lig3-209ENSMUST00000173009 GsdmaQ9EST1 446 aa26.63■■□□□ 1.85
Lig3-209ENSMUST00000173009 Cypt2Q6P924 180 aa26.62■■□□□ 1.85
Lig3-209ENSMUST00000173009 Tsen2Q6P7W5 460 aa26.61■■□□□ 1.85
Lig3-209ENSMUST00000173009 Slc4a2P13808 1237 aaKnown RBP26.61■■□□□ 1.85
Lig3-209ENSMUST00000173009 Zscan21Q07231 555 aa26.6■■□□□ 1.85
Lig3-209ENSMUST00000173009 Emilin2Q8K482 1074 aa26.6■■□□□ 1.85
Lig3-209ENSMUST00000173009 Nhsl1Q8CAF4 1587 aa26.59■■□□□ 1.85
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms