RNA–Protein interactions for RNA: ENSMUST00000160664.7

Ppp4r1-204, Transcript of Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ppp4r1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1-204ENSMUST00000160664 Uspl1Q3ULM6 1089 aa13.71□□□□□ -0.21
Ppp4r1-204ENSMUST00000160664 Senp3Q9EP97 568 aaKnown RBP13.71□□□□□ -0.21
Ppp4r1-204ENSMUST00000160664 KdrP35918 1367 aa13.71□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Alpk3Q924C5 1678 aa13.71□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Usp19Q3UJD6 1360 aa13.7□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 PtpruB1AUH1 1446 aa13.7□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Pik3c2bE9QAN8 1632 aa13.7□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Rreb1Q3UH06 1700 aaKnown RBP13.7□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Topaz1E5FYH1 1653 aa13.69□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Erbb3Q61526 1339 aa13.69□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Map4k4P97820 1233 aaKnown RBP13.69□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Ralbp1Q62172 648 aa13.69□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Dennd6aQ8BH65 605 aa13.68□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Sirt1Q923E4 737 aa13.68□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Dusp27Q148W8 1138 aa13.67□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Ksr2Q3UVC0 959 aa13.67□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Ppp4r2Q0VGB7 417 aa13.67□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Kcnh8P59111 1102 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Mcm10Q0VBD2 885 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Slain2Q8CI08 581 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Rwdd1Q9CQK7 243 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Usp32F8VPZ3 1604 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Tns3Q5SSZ5 1440 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Rims2Q9EQZ7 1530 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Fyb1O35601 819 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 MpripP97434 1024 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Gas2l2Q5SSG4 860 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Slc35g1Q8BY79 368 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Ppp1r15aP17564 657 aa13.66□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Frmpd2A0A140LI67 1392 aa13.65□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Kank1E9Q238 1360 aa13.65□□□□□ -0.22
Ppp4r1-204ENSMUST00000160664 Nckap5lQ6GQX2 1323 aa13.64□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 GnpatP98192 678 aa13.64□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Trim28Q62318 834 aa13.64□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Wdr43Q6ZQL4 677 aaKnown RBP13.63□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Nolc1E9Q5C9 702 aaKnown RBP13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Slc4a3P16283 1227 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Uhrf1bp1lA2RSJ4 1457 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Cavin4A2AMM0 362 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Atf3Q60765 181 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Rapgef3Q8VCC8 918 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Plekhh1Q80TI1 1356 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Astn2Q80Z10 1352 aa13.62□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Rsph6aQ8CDR2 708 aa13.61□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Cabp2Q9JLK4 216 aa13.61□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Nlgn1Q99K10 843 aa13.61□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Tnrc6bQ8BKI2 1810 aaKnown RBP13.61□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Abcc10Q8R4P9 1501 aa13.61□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Eif4a2P10630 407 aa13.6□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Znf335A2A5K6 1337 aa13.6□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Hoxb7P09024 217 aa13.59□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Stk31Q99MW1 1018 aa13.59□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Arap3Q8R5G7 1538 aa13.59□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Gm6268A2A3U9 297 aa13.59□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Ddx17Q501J6 650 aaKnown RBP13.58□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Swt1Q9DBQ9 907 aa13.58□□□□□ -0.23
Ppp4r1-204ENSMUST00000160664 Rimbp3Q3V0F0 1606 aa13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Ccne1Q61457 408 aa13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Tmem132eQ6IEE6 982 aa13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Fchsd2Q3USJ8 740 aa13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 U2surpQ6NV83 1029 aaKnown RBP13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Chd4Q6PDQ2 1915 aaKnown RBP13.58□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Iqcf3Q9D498 203 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Kif20bQ80WE4 1774 aaKnown RBP13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 1700019A02RikA0A087WPV9 146 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 TatQ8QZR1 454 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Med1Q925J9 1575 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Cyb5rlB1AS42 316 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Farp2Q91VS8 1065 aa13.57□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Ccar1Q8CH18 1146 aaKnown RBP13.56□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Iqsec2Q5DU25 1478 aa13.56□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 FancaQ9JL70 1439 aa13.56□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 TnikP83510 1323 aa13.56□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Rbm25B2RY56 838 aaKnown RBP13.55□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Anp32aO35381 247 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 TimelessQ9R1X4 1197 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 C3P01027 1663 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Pibf1E9Q6K3 756 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Q4VA45 678 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Lmtk3Q5XJV6 1424 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 D430041D05RikF6ZGR6 1678 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Tmem2Q5FWI3 1383 aa13.54□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Pank1Q8K4K6 548 aa13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Ciz1Q8VEH2 845 aa13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Ccdc60Q8C4J0 545 aa13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Gimap6Q8K349 305 aa13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Wdr17E9Q271 1322 aa13.53□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Znf330Q922H9 316 aa13.52□□□□□ -0.24
Ppp4r1-204ENSMUST00000160664 Nrxn3Q6P9K9 1571 aa13.52□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 NudcO35685 332 aaKnown RBP13.52□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Tmco5bQ80X59 307 aa13.52□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Irx6Q9ER75 438 aa13.52□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Cdk12Q14AX6 1484 aaKnown RBP13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Eya1P97767 591 aa13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Col14a1Q80X19 1797 aa13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 N4bp2F8VQG7 1678 aaKnown RBP13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 C5P06684 1680 aa13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 Hoxc9P09633 260 aa13.51□□□□□ -0.25
Ppp4r1-204ENSMUST00000160664 TmpoQ61033 693 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms