RNA–Protein interactions for RNA: ENSMUST00000160664.7

Ppp4r1-204, Transcript of Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ppp4r1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1-204ENSMUST00000160664 NischQ80TM9 1593 aa21.25■□□□□ 0.99
Ppp4r1-204ENSMUST00000160664 Gm35339A0A140LHH9 1649 aa20.82■□□□□ 0.92
Ppp4r1-204ENSMUST00000160664 Abcc9P70170 1546 aa20.5■□□□□ 0.87
Ppp4r1-204ENSMUST00000160664 Abcc8B2RUS7 1588 aa20.24■□□□□ 0.83
Ppp4r1-204ENSMUST00000160664 Rhox8Q6VSS7 320 aa19.69■□□□□ 0.74
Ppp4r1-204ENSMUST00000160664 ScribQ80U72 1612 aa19.06■□□□□ 0.64
Ppp4r1-204ENSMUST00000160664 Kdm5dQ62240 1548 aa18.69■□□□□ 0.58
Ppp4r1-204ENSMUST00000160664 Dcaf1Q80TR8 1506 aa18.66■□□□□ 0.58
Ppp4r1-204ENSMUST00000160664 NacadQ5SWP3 1504 aa18.61■□□□□ 0.57
Ppp4r1-204ENSMUST00000160664 Rb1cc1Q9ESK9 1588 aa18.59■□□□□ 0.57
Ppp4r1-204ENSMUST00000160664 Rtl1Q7M732 1744 aa18.34■□□□□ 0.53
Ppp4r1-204ENSMUST00000160664 Baz1aO88379 1555 aa18.3■□□□□ 0.52
Ppp4r1-204ENSMUST00000160664 Ccdc136Q3TVA9 1136 aa18.28■□□□□ 0.52
Ppp4r1-204ENSMUST00000160664 Zcchc6Q5BLK4 1491 aaKnown RBP18.24■□□□□ 0.51
Ppp4r1-204ENSMUST00000160664 Sycp2Q9CUU3 1500 aa18.19■□□□□ 0.5
Ppp4r1-204ENSMUST00000160664 Ccdc180J3QNE4 1664 aa18.05■□□□□ 0.48
Ppp4r1-204ENSMUST00000160664 Crybg2B7ZCC2 1516 aa17.95■□□□□ 0.46
Ppp4r1-204ENSMUST00000160664 BicraF8VPZ9 1578 aa17.81■□□□□ 0.44
Ppp4r1-204ENSMUST00000160664 Smarca2Q6DIC0 1577 aa17.8■□□□□ 0.44
Ppp4r1-204ENSMUST00000160664 Trim41Q5NCC3 630 aa17.79■□□□□ 0.44
Ppp4r1-204ENSMUST00000160664 Cecr2E9Q2Z1 1453 aa17.65■□□□□ 0.42
Ppp4r1-204ENSMUST00000160664 Esf1Q3V1V3 845 aaKnown RBP17.54■□□□□ 0.4
Ppp4r1-204ENSMUST00000160664 Cngb1E1AZ71 1325 aa17.54■□□□□ 0.4
Ppp4r1-204ENSMUST00000160664 Brd4Q9ESU6 1400 aaKnown RBP17.52■□□□□ 0.39
Ppp4r1-204ENSMUST00000160664 HrcG5E8J6 738 aa17.37■□□□□ 0.37
Ppp4r1-204ENSMUST00000160664 Synj1Q8CHC4 1574 aa17.36■□□□□ 0.37
Ppp4r1-204ENSMUST00000160664 Smarca4Q3TKT4 1613 aaKnown RBP17.33■□□□□ 0.36
Ppp4r1-204ENSMUST00000160664 CftrP26361 1476 aa17.31■□□□□ 0.36
Ppp4r1-204ENSMUST00000160664 Pds5bQ4VA53 1446 aaKnown RBP17.25■□□□□ 0.35
Ppp4r1-204ENSMUST00000160664 Atad2bE9Q166 1460 aaKnown RBP17.21■□□□□ 0.35
Ppp4r1-204ENSMUST00000160664 Iqgap2Q3UQ44 1575 aa17.17■□□□□ 0.34
Ppp4r1-204ENSMUST00000160664 Cttnbp2B9EJA2 1648 aa17.16■□□□□ 0.34
Ppp4r1-204ENSMUST00000160664 Golga3P55937 1487 aa17.16■□□□□ 0.34
Ppp4r1-204ENSMUST00000160664 Chic1Q8CBW7 227 aa17.13■□□□□ 0.33
Ppp4r1-204ENSMUST00000160664 Gab3Q8BSM5 595 aa17.12■□□□□ 0.33
Ppp4r1-204ENSMUST00000160664 Rsf1E9PWW9 1441 aaKnown RBP17.03■□□□□ 0.32
Ppp4r1-204ENSMUST00000160664 Ccdc88bQ4QRL3 1481 aa17■□□□□ 0.31
Ppp4r1-204ENSMUST00000160664 Cep164Q5DU05 1446 aa16.99■□□□□ 0.31
Ppp4r1-204ENSMUST00000160664 Ercc6F8VPZ5 1481 aa16.99■□□□□ 0.31
Ppp4r1-204ENSMUST00000160664 Ehmt2Q9Z148 1263 aaKnown RBP16.94■□□□□ 0.3
Ppp4r1-204ENSMUST00000160664 Frmpd1A2AKB4 1549 aa16.91■□□□□ 0.3
Ppp4r1-204ENSMUST00000160664 Il27Q8K3I6 234 aa16.86■□□□□ 0.29
Ppp4r1-204ENSMUST00000160664 Top2bQ64511 1612 aa16.85■□□□□ 0.29
Ppp4r1-204ENSMUST00000160664 Wdr62Q3U3T8 1523 aa16.85■□□□□ 0.29
Ppp4r1-204ENSMUST00000160664 Cc2d2aQ8CFW7 1633 aa16.83■□□□□ 0.28
Ppp4r1-204ENSMUST00000160664 Ubl4bQ9CQ84 188 aa16.77■□□□□ 0.28
Ppp4r1-204ENSMUST00000160664 Fmn1Q05860 1466 aa16.77■□□□□ 0.27
Ppp4r1-204ENSMUST00000160664 Kif15Q6P9L6 1387 aa16.76■□□□□ 0.27
Ppp4r1-204ENSMUST00000160664 Npm2Q80W85 207 aa16.72■□□□□ 0.27
Ppp4r1-204ENSMUST00000160664 Phldb1Q6PDH0 1371 aaKnown RBP16.7■□□□□ 0.26
Ppp4r1-204ENSMUST00000160664 Thoc2B1AZI6 1594 aaKnown RBP16.67■□□□□ 0.26
Ppp4r1-204ENSMUST00000160664 Dnajc5bQ9CQ94 199 aa16.66■□□□□ 0.26
Ppp4r1-204ENSMUST00000160664 Myt1lP97500 1187 aa16.65■□□□□ 0.26
Ppp4r1-204ENSMUST00000160664 Npm1Q61937 292 aaKnown RBP16.59■□□□□ 0.25
Ppp4r1-204ENSMUST00000160664 Unc13aQ4KUS2 1712 aa16.55■□□□□ 0.24
Ppp4r1-204ENSMUST00000160664 Top2aQ01320 1528 aaKnown RBP16.54■□□□□ 0.24
Ppp4r1-204ENSMUST00000160664 Zeb1Q64318 1117 aa16.54■□□□□ 0.24
Ppp4r1-204ENSMUST00000160664 Cux2P70298 1426 aa16.53■□□□□ 0.24
Ppp4r1-204ENSMUST00000160664 Lamc3Q9R0B6 1581 aa16.52■□□□□ 0.23
Ppp4r1-204ENSMUST00000160664 Ccdc18Q640L5 1455 aa16.49■□□□□ 0.23
Ppp4r1-204ENSMUST00000160664 TnnQ80Z71 1560 aa16.47■□□□□ 0.23
Ppp4r1-204ENSMUST00000160664 Fam135aQ6NS59 1506 aa16.46■□□□□ 0.23
Ppp4r1-204ENSMUST00000160664 Rapgef2Q8CHG7 1496 aa16.42■□□□□ 0.22
Ppp4r1-204ENSMUST00000160664 Camsap1A2AHC3 1581 aa16.38■□□□□ 0.21
Ppp4r1-204ENSMUST00000160664 Cep162Q6ZQ06 1403 aa16.37■□□□□ 0.21
Ppp4r1-204ENSMUST00000160664 PtprkP35822 1457 aa16.33■□□□□ 0.21
Ppp4r1-204ENSMUST00000160664 LrpprcQ6PB66 1392 aaKnown RBP16.29■□□□□ 0.2
Ppp4r1-204ENSMUST00000160664 Grin2bQ01097 1482 aa16.27■□□□□ 0.2
Ppp4r1-204ENSMUST00000160664 Mrc2Q64449 1479 aa16.26■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 Acin1Q9JIX8 1338 aaKnown RBP16.25■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 Ap3b1Q9Z1T1 1105 aa16.24■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 Shroom4Q1W617 1475 aa16.24■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 Dhx29Q6PGC1 1365 aaKnown RBP16.23■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 NrkQ9R0G8 1455 aa16.22■□□□□ 0.19
Ppp4r1-204ENSMUST00000160664 UbtfP25976 765 aaKnown RBP16.2■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 Baz1bQ9Z277 1479 aa16.18■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 Arhgap35Q91YM2 1499 aa16.18■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 PogzQ8BZH4 1409 aaKnown RBP16.18■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 Clip1Q922J3 1391 aa16.18■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 Duox2A2AQ99 1517 aa16.17■□□□□ 0.18
Ppp4r1-204ENSMUST00000160664 Plekhg3Q4VAC9 1341 aa16.14■□□□□ 0.17
Ppp4r1-204ENSMUST00000160664 Rpgrip1Q9EPQ2 1331 aa16.14■□□□□ 0.17
Ppp4r1-204ENSMUST00000160664 Efcab5A0JP43 1406 aa16.13■□□□□ 0.17
Ppp4r1-204ENSMUST00000160664 Kif21aQ9QXL2 1672 aa16.08■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Setd5Q5XJV7 1441 aa16.06■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Mroh2bQ7M6Y6 1581 aa16.06■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Rad54l2Q99NG0 1466 aa16.05■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Eif4g1Q6NZJ6 1600 aaKnown RBP16.03■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Eea1Q8BL66 1411 aa16.03■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Crocc2F6XLV1 1638 aa16.02■□□□□ 0.16
Ppp4r1-204ENSMUST00000160664 Plb1Q3TTY0 1478 aa16.01■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Map3k1P53349 1493 aa16■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Samd9lQ69Z37 1561 aa15.99■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Mier1Q5UAK0 511 aa15.98■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Carmil1Q6EDY6 1374 aa15.97■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Urb2E9Q7L1 1524 aaKnown RBP15.97■□□□□ 0.15
Ppp4r1-204ENSMUST00000160664 Lmod2Q3UHZ5 550 aa15.95■□□□□ 0.14
Ppp4r1-204ENSMUST00000160664 SynmQ70IV5 1561 aa15.91■□□□□ 0.14
Ppp4r1-204ENSMUST00000160664 Arap1Q4LDD4 1452 aa15.89■□□□□ 0.13
Ppp4r1-204ENSMUST00000160664 AqrQ8CFQ3 1481 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms