RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Mre11Q61216 706 aa17.86■□□□□ 0.45
Lime1-201ENSMUST00000048077 DiexfQ8BTT6 772 aaKnown RBP17.85■□□□□ 0.45
Lime1-201ENSMUST00000048077 Dusp27Q148W8 1138 aa17.84■□□□□ 0.45
Lime1-201ENSMUST00000048077 Cavin4A2AMM0 362 aa17.84■□□□□ 0.45
Lime1-201ENSMUST00000048077 Atl3Q91YH5 541 aa17.84■□□□□ 0.45
Lime1-201ENSMUST00000048077 Fchsd2Q3USJ8 740 aa17.83■□□□□ 0.44
Lime1-201ENSMUST00000048077 Atp1b4Q99ME6 356 aa17.83■□□□□ 0.44
Lime1-201ENSMUST00000048077 Atp2b2Q9R0K7 1198 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ccdc183A2AJB1 534 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 Hs1bp3Q3TC93 395 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 Cdk19Q8BWD8 501 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 Rlbp1Q9Z275 317 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ttc21aQ8C0S4 1314 aa17.82■□□□□ 0.44
Lime1-201ENSMUST00000048077 NinlQ6ZQ12 1394 aa17.81■□□□□ 0.44
Lime1-201ENSMUST00000048077 Utp14aQ640M1 767 aaKnown RBP17.81■□□□□ 0.44
Lime1-201ENSMUST00000048077 Nwd1A6H603 1563 aa17.81■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ak7Q9D2H2 614 aa17.8■□□□□ 0.44
Lime1-201ENSMUST00000048077 RictorQ6QI06 1708 aa17.8■□□□□ 0.44
Lime1-201ENSMUST00000048077 Trim30dE9PWL0 497 aa17.8■□□□□ 0.44
Lime1-201ENSMUST00000048077 Trim28Q62318 834 aa17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ccdc171E9Q1U1 1324 aa17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Dip2aQ8BWT5 1523 aa17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Q9D9H8 365 aa17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Sart3Q9JLI8 962 aaKnown RBP17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ankrd50F7BE84 1390 aa17.79■□□□□ 0.44
Lime1-201ENSMUST00000048077 Atp7bQ64446 1462 aa17.78■□□□□ 0.44
Lime1-201ENSMUST00000048077 Ppp2r3aB2RXC8 1150 aa17.78■□□□□ 0.44
Lime1-201ENSMUST00000048077 CastP51125 788 aa17.78■□□□□ 0.44
Lime1-201ENSMUST00000048077 NpatQ8BMA5 1420 aa17.77■□□□□ 0.43
Lime1-201ENSMUST00000048077 Zranb1Q7M760 708 aa17.77■□□□□ 0.43
Lime1-201ENSMUST00000048077 Ppp1r9bQ6R891 817 aaKnown RBP17.75■□□□□ 0.43
Lime1-201ENSMUST00000048077 Afap1Q80YS6 731 aa17.75■□□□□ 0.43
Lime1-201ENSMUST00000048077 Polr3glQ8R0C0 218 aa17.75■□□□□ 0.43
Lime1-201ENSMUST00000048077 Kif1aP33173 1695 aa17.75■□□□□ 0.43
Lime1-201ENSMUST00000048077 Hsp90ab1P11499 724 aaKnown RBP17.75■□□□□ 0.43
Lime1-201ENSMUST00000048077 Pik3r4Q8VD65 1358 aa17.74■□□□□ 0.43
Lime1-201ENSMUST00000048077 Swt1Q9DBQ9 907 aa17.73■□□□□ 0.43
Lime1-201ENSMUST00000048077 Map3k19E9Q3S4 1311 aa17.72■□□□□ 0.43
Lime1-201ENSMUST00000048077 Ppp1r15aP17564 657 aa17.71■□□□□ 0.43
Lime1-201ENSMUST00000048077 Q4VA45 678 aa17.71■□□□□ 0.43
Lime1-201ENSMUST00000048077 Slc12a5Q91V14 1138 aa17.71■□□□□ 0.43
Lime1-201ENSMUST00000048077 Gemin5Q8BX17 1502 aaKnown RBP17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 Spef2Q8C9J3 1734 aa17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 Rbm25B2RY56 838 aaKnown RBP17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 4930567H17RikQ3V0K5 233 aa17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 Eif2s2Q99L45 331 aaKnown RBP17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 Phlpp2Q8BXA7 1320 aa17.7■□□□□ 0.42
Lime1-201ENSMUST00000048077 Ppp1r18Q8BQ30 594 aa17.69■□□□□ 0.42
Lime1-201ENSMUST00000048077 Trim26Q99PN3 545 aa17.69■□□□□ 0.42
Lime1-201ENSMUST00000048077 Cps1Q8C196 1500 aa17.69■□□□□ 0.42
Lime1-201ENSMUST00000048077 Ercc6l2Q9JIM3 1537 aa17.69■□□□□ 0.42
Lime1-201ENSMUST00000048077 PtpruB1AUH1 1446 aa17.69■□□□□ 0.42
Lime1-201ENSMUST00000048077 Hoxb7P09024 217 aa17.68■□□□□ 0.42
Lime1-201ENSMUST00000048077 PalmQ9Z0P4 383 aa17.68■□□□□ 0.42
Lime1-201ENSMUST00000048077 Tbc1d32Q3URV1 1296 aa17.67■□□□□ 0.42
Lime1-201ENSMUST00000048077 Ccdc60Q8C4J0 545 aa17.67■□□□□ 0.42
Lime1-201ENSMUST00000048077 G3bp1P97855 465 aaKnown RBP17.66■□□□□ 0.42
Lime1-201ENSMUST00000048077 Idi2Q8BFZ6 227 aa17.66■□□□□ 0.42
Lime1-201ENSMUST00000048077 Mdc1Q5PSV9 1707 aa17.66■□□□□ 0.42
Lime1-201ENSMUST00000048077 Map7O88735 730 aa17.66■□□□□ 0.42
Lime1-201ENSMUST00000048077 Pdlim2Q8R1G6 349 aa17.65■□□□□ 0.42
Lime1-201ENSMUST00000048077 KarsQ99MN1 595 aaKnown RBP17.65■□□□□ 0.42
Lime1-201ENSMUST00000048077 Chmp4bQ9D8B3 224 aaKnown RBP17.64■□□□□ 0.41
Lime1-201ENSMUST00000048077 Maco1Q7TQE6 664 aaKnown RBP17.64■□□□□ 0.41
Lime1-201ENSMUST00000048077 Ppp1r3fQ9JIG4 799 aa17.64■□□□□ 0.41
Lime1-201ENSMUST00000048077 Rabep1O35551 862 aa17.63■□□□□ 0.41
Lime1-201ENSMUST00000048077 Tnrc6bQ8BKI2 1810 aaKnown RBP17.63■□□□□ 0.41
Lime1-201ENSMUST00000048077 Sptbn5F6UCX4 1208 aa17.62■□□□□ 0.41
Lime1-201ENSMUST00000048077 DaxxO35613 739 aa17.62■□□□□ 0.41
Lime1-201ENSMUST00000048077 Gnai1B2RSH2 354 aa17.62■□□□□ 0.41
Lime1-201ENSMUST00000048077 Gnai3Q9DC51 354 aa17.62■□□□□ 0.41
Lime1-201ENSMUST00000048077 Chd2E9PZM4 1827 aaKnown RBP17.61■□□□□ 0.41
Lime1-201ENSMUST00000048077 Htatsf1Q8BGC0 757 aa17.61■□□□□ 0.41
Lime1-201ENSMUST00000048077 Aldh1l1Q8R0Y6 902 aa17.61■□□□□ 0.41
Lime1-201ENSMUST00000048077 Armcx1Q9CX83 456 aa17.61■□□□□ 0.41
Lime1-201ENSMUST00000048077 Sos1Q62245 1319 aa17.61■□□□□ 0.41
Lime1-201ENSMUST00000048077 Wwc1Q5SXA9 1104 aa17.6■□□□□ 0.41
Lime1-201ENSMUST00000048077 Cdc37l1Q9CZP7 335 aa17.6■□□□□ 0.41
Lime1-201ENSMUST00000048077 Slit3Q9WVB4 1523 aa17.6■□□□□ 0.41
Lime1-201ENSMUST00000048077 Cavin2Q63918 418 aaKnown RBP17.6■□□□□ 0.41
Lime1-201ENSMUST00000048077 Sirt1Q923E4 737 aa17.6■□□□□ 0.41
Lime1-201ENSMUST00000048077 Uhrf1bp1lA2RSJ4 1457 aa17.59■□□□□ 0.41
Lime1-201ENSMUST00000048077 CatipB9EKE5 520 aa17.59■□□□□ 0.41
Lime1-201ENSMUST00000048077 SkilQ60665 675 aa17.59■□□□□ 0.41
Lime1-201ENSMUST00000048077 Vamp4O70480 141 aa17.59■□□□□ 0.41
Lime1-201ENSMUST00000048077 Plekhm2Q80TQ5 1018 aa17.59■□□□□ 0.41
Lime1-201ENSMUST00000048077 Nsd3Q6P2L6 1439 aa17.58■□□□□ 0.41
Lime1-201ENSMUST00000048077 AU019823E9PUQ3 292 aa17.58■□□□□ 0.4
Lime1-201ENSMUST00000048077 Psme1P97371 249 aa17.58■□□□□ 0.4
Lime1-201ENSMUST00000048077 Rsph6aQ8CDR2 708 aa17.58■□□□□ 0.4
Lime1-201ENSMUST00000048077 Pik3c2bE9QAN8 1632 aa17.58■□□□□ 0.4
Lime1-201ENSMUST00000048077 Q3UPC7 1272 aa17.57■□□□□ 0.4
Lime1-201ENSMUST00000048077 Chd4Q6PDQ2 1915 aaKnown RBP17.57■□□□□ 0.4
Lime1-201ENSMUST00000048077 Birc3O08863 600 aa17.57■□□□□ 0.4
Lime1-201ENSMUST00000048077 Cluap1Q8R3P7 413 aa17.57■□□□□ 0.4
Lime1-201ENSMUST00000048077 MvpQ9EQK5 861 aa17.57■□□□□ 0.4
Lime1-201ENSMUST00000048077 Dip2bQ3UH60 1574 aa17.56■□□□□ 0.4
Lime1-201ENSMUST00000048077 Znf335A2A5K6 1337 aa17.56■□□□□ 0.4
Lime1-201ENSMUST00000048077 Asxl2Q8BZ32 1370 aa17.55■□□□□ 0.4
Lime1-201ENSMUST00000048077 KnstrnQ9D9Z1 312 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms