RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Zc3h13E9Q784 1729 aaKnown RBP11□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Ralbp1Q62172 648 aa10.99□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Dip2aQ8BWT5 1523 aa10.99□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Rsph4aQ8BYM7 716 aa10.99□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Uhrf1bp1lA2RSJ4 1457 aa10.99□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 PplQ9R269 1755 aa10.98□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Plekhg1F6S200 1446 aa10.98□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 FanciQ8K368 1330 aa10.98□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Usp32F8VPZ3 1604 aa10.98□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Znf330Q922H9 316 aa10.98□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Ttc41Q692V3 1318 aa10.97□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Ttll13A4Q9F6 804 aa10.97□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Dip2bQ3UH60 1574 aa10.96□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Mapk8ip3Q9ESN9 1337 aa10.96□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Pik3c2bE9QAN8 1632 aa10.96□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Chd2E9PZM4 1827 aaKnown RBP10.96□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Kdm2bQ6P1G2 1309 aa10.96□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 4930407I10RikD3Z5T8 1512 aa10.96□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Q3UJC8 639 aa10.95□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Nutm1Q8BHP2 1126 aa10.95□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Rlbp1Q9Z275 317 aa10.95□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Idi1P58044 227 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 MpripP97434 1024 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Nectin2P32507 530 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Q4VA45 678 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Idi2Q8BFZ6 227 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Cabp2Q9JLK4 216 aa10.94□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Nckap5lQ6GQX2 1323 aa10.93□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Trim28Q62318 834 aa10.93□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Klhdc4Q921I2 584 aa10.93□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Duxf3A0A0N4SV92 674 aa10.93□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 MlecQ6ZQI3 291 aaKnown RBP10.93□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 PzpQ61838 1495 aa10.92□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Gm6268A2A3U9 297 aa10.92□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 ChgaP26339 463 aaKnown RBP10.92□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Slit3Q9WVB4 1523 aa10.92□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Tmem94Q7TSH8 1360 aa10.91□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Rbm25B2RY56 838 aaKnown RBP10.91□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 4930567H17RikQ3V0K5 233 aa10.91□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 TnikP83510 1323 aa10.91□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Gm10563F6WIE4 79 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Pnmal2G3X9N3 661 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Ccdc60Q8C4J0 545 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Rsph6aQ8CDR2 708 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Cluap1Q8R3P7 413 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Pik3r4Q8VD65 1358 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Cavin4A2AMM0 362 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 CatipB9EKE5 520 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Slc35g1Q8BY79 368 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Cps1Q8C196 1500 aa10.9□□□□□ -0.66
Ptchd1-201ENSMUST00000038665 Gemin5Q8BX17 1502 aaKnown RBP10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 PtpruB1AUH1 1446 aa10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Chmp5Q9D7S9 219 aa10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Pibf1E9Q6K3 756 aa10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Snap23O09044 210 aa10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Eif4a2P10630 407 aa10.89□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 CastP51125 788 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 U2surpQ6NV83 1029 aaKnown RBP10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Ccar1Q8CH18 1146 aaKnown RBP10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Ankrd50F7BE84 1390 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Trim58Q5NCC9 485 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Tmco5bQ80X59 307 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Chd4Q6PDQ2 1915 aaKnown RBP10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 1700019A02RikA0A087WPV9 146 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Ppp1r15aP17564 657 aa10.88□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Aplp1Q03157 653 aa10.87□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Smc5Q8CG46 1101 aaKnown RBP10.87□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 ArxO35085 564 aa10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Cdc37l1Q9CZP7 335 aa10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Mbd3Q9Z2D8 285 aaKnown RBP10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Znf521Q6KAS7 1311 aa10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Ttc21aQ8C0S4 1314 aa10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Swt1Q9DBQ9 907 aa10.86□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Rreb1Q3UH06 1700 aaKnown RBP10.85□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Gm21190A0A0G2JGJ6 266 aa10.85□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Maco1Q7TQE6 664 aaKnown RBP10.85□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Tmem132eQ6IEE6 982 aa10.85□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Cabp4Q8VHC5 271 aa10.85□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 FancaQ9JL70 1439 aa10.84□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 AU019823E9PUQ3 292 aa10.84□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Abcc10Q8R4P9 1501 aa10.84□□□□□ -0.67
Ptchd1-201ENSMUST00000038665 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.83□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Ggnbp2Q5SV77 696 aa10.83□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 EspnQ9ET47 871 aa10.83□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Tnrc6bQ8BKI2 1810 aaKnown RBP10.83□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Dennd6aQ8BH65 605 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Kif1aP33173 1695 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 G3bp1P97855 465 aaKnown RBP10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Nlgn1Q99K10 843 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Usp16Q99LG0 825 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Uhrf1bp1B2KF50 1429 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Nsd3Q6P2L6 1439 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Prim1P20664 417 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Ccne1Q61457 408 aa10.82□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 N4bp2F8VQG7 1678 aaKnown RBP10.81□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Frmpd2A0A140LI67 1392 aa10.81□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Trim30dE9PWL0 497 aa10.81□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Fchsd2Q3USJ8 740 aa10.81□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Pik3c2aQ61194 1686 aa10.81□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Aifm3Q3TY86 605 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms