RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 NischQ80TM9 1593 aa16.9■□□□□ 0.3
Ptchd1-201ENSMUST00000038665 Gm35339A0A140LHH9 1649 aa16.54■□□□□ 0.24
Ptchd1-201ENSMUST00000038665 Abcc9P70170 1546 aa16.37■□□□□ 0.21
Ptchd1-201ENSMUST00000038665 Abcc8B2RUS7 1588 aa16.09■□□□□ 0.17
Ptchd1-201ENSMUST00000038665 Rhox8Q6VSS7 320 aa15.7■□□□□ 0.1
Ptchd1-201ENSMUST00000038665 ScribQ80U72 1612 aa15.17■□□□□ 0.02
Ptchd1-201ENSMUST00000038665 Kdm5dQ62240 1548 aa14.83□□□□□ -0.04
Ptchd1-201ENSMUST00000038665 Rtl1Q7M732 1744 aa14.82□□□□□ -0.04
Ptchd1-201ENSMUST00000038665 Rb1cc1Q9ESK9 1588 aa14.81□□□□□ -0.04
Ptchd1-201ENSMUST00000038665 Dcaf1Q80TR8 1506 aa14.76□□□□□ -0.05
Ptchd1-201ENSMUST00000038665 Zcchc6Q5BLK4 1491 aaKnown RBP14.65□□□□□ -0.06
Ptchd1-201ENSMUST00000038665 Ccdc136Q3TVA9 1136 aa14.63□□□□□ -0.07
Ptchd1-201ENSMUST00000038665 Ccdc180J3QNE4 1664 aa14.62□□□□□ -0.07
Ptchd1-201ENSMUST00000038665 NacadQ5SWP3 1504 aa14.62□□□□□ -0.07
Ptchd1-201ENSMUST00000038665 Baz1aO88379 1555 aa14.57□□□□□ -0.08
Ptchd1-201ENSMUST00000038665 Sycp2Q9CUU3 1500 aa14.34□□□□□ -0.11
Ptchd1-201ENSMUST00000038665 Smarca2Q6DIC0 1577 aa14.24□□□□□ -0.13
Ptchd1-201ENSMUST00000038665 Crybg2B7ZCC2 1516 aa14.14□□□□□ -0.15
Ptchd1-201ENSMUST00000038665 BicraF8VPZ9 1578 aa14.13□□□□□ -0.15
Ptchd1-201ENSMUST00000038665 Cecr2E9Q2Z1 1453 aa14.12□□□□□ -0.15
Ptchd1-201ENSMUST00000038665 Ehmt2Q9Z148 1263 aaKnown RBP14.06□□□□□ -0.16
Ptchd1-201ENSMUST00000038665 Trim41Q5NCC3 630 aa14.05□□□□□ -0.16
Ptchd1-201ENSMUST00000038665 HrcG5E8J6 738 aa13.99□□□□□ -0.17
Ptchd1-201ENSMUST00000038665 Cngb1E1AZ71 1325 aa13.97□□□□□ -0.17
Ptchd1-201ENSMUST00000038665 Synj1Q8CHC4 1574 aa13.9□□□□□ -0.18
Ptchd1-201ENSMUST00000038665 Chic1Q8CBW7 227 aa13.86□□□□□ -0.19
Ptchd1-201ENSMUST00000038665 Brd4Q9ESU6 1400 aaKnown RBP13.85□□□□□ -0.19
Ptchd1-201ENSMUST00000038665 Rsf1E9PWW9 1441 aaKnown RBP13.8□□□□□ -0.2
Ptchd1-201ENSMUST00000038665 Gab3Q8BSM5 595 aa13.79□□□□□ -0.2
Ptchd1-201ENSMUST00000038665 Esf1Q3V1V3 845 aaKnown RBP13.78□□□□□ -0.2
Ptchd1-201ENSMUST00000038665 CftrP26361 1476 aa13.77□□□□□ -0.21
Ptchd1-201ENSMUST00000038665 Ccdc88bQ4QRL3 1481 aa13.76□□□□□ -0.21
Ptchd1-201ENSMUST00000038665 Cep164Q5DU05 1446 aa13.73□□□□□ -0.21
Ptchd1-201ENSMUST00000038665 Golga3P55937 1487 aa13.71□□□□□ -0.21
Ptchd1-201ENSMUST00000038665 Smarca4Q3TKT4 1613 aaKnown RBP13.68□□□□□ -0.22
Ptchd1-201ENSMUST00000038665 Cttnbp2B9EJA2 1648 aa13.63□□□□□ -0.23
Ptchd1-201ENSMUST00000038665 Cc2d2aQ8CFW7 1633 aa13.56□□□□□ -0.24
Ptchd1-201ENSMUST00000038665 Iqgap2Q3UQ44 1575 aa13.55□□□□□ -0.24
Ptchd1-201ENSMUST00000038665 Top2bQ64511 1612 aa13.54□□□□□ -0.24
Ptchd1-201ENSMUST00000038665 Acin1Q9JIX8 1338 aaKnown RBP13.51□□□□□ -0.25
Ptchd1-201ENSMUST00000038665 Atad2bE9Q166 1460 aaKnown RBP13.46□□□□□ -0.25
Ptchd1-201ENSMUST00000038665 Pds5bQ4VA53 1446 aaKnown RBP13.4□□□□□ -0.26
Ptchd1-201ENSMUST00000038665 Frmpd1A2AKB4 1549 aa13.35□□□□□ -0.27
Ptchd1-201ENSMUST00000038665 Fmn1Q05860 1466 aa13.34□□□□□ -0.27
Ptchd1-201ENSMUST00000038665 Rpgrip1Q9EPQ2 1331 aa13.31□□□□□ -0.28
Ptchd1-201ENSMUST00000038665 Myt1lP97500 1187 aa13.3□□□□□ -0.28
Ptchd1-201ENSMUST00000038665 Il27Q8K3I6 234 aa13.29□□□□□ -0.28
Ptchd1-201ENSMUST00000038665 Wdr62Q3U3T8 1523 aa13.29□□□□□ -0.28
Ptchd1-201ENSMUST00000038665 Top2aQ01320 1528 aaKnown RBP13.28□□□□□ -0.28
Ptchd1-201ENSMUST00000038665 Rapgef2Q8CHG7 1496 aa13.24□□□□□ -0.29
Ptchd1-201ENSMUST00000038665 Npm2Q80W85 207 aa13.22□□□□□ -0.29
Ptchd1-201ENSMUST00000038665 Ercc6F8VPZ5 1481 aa13.21□□□□□ -0.29
Ptchd1-201ENSMUST00000038665 Kif15Q6P9L6 1387 aa13.19□□□□□ -0.3
Ptchd1-201ENSMUST00000038665 Unc13aQ4KUS2 1712 aa13.18□□□□□ -0.3
Ptchd1-201ENSMUST00000038665 Cep162Q6ZQ06 1403 aa13.16□□□□□ -0.3
Ptchd1-201ENSMUST00000038665 TnnQ80Z71 1560 aa13.16□□□□□ -0.3
Ptchd1-201ENSMUST00000038665 PtprkP35822 1457 aa13.14□□□□□ -0.31
Ptchd1-201ENSMUST00000038665 UbtfP25976 765 aaKnown RBP13.11□□□□□ -0.31
Ptchd1-201ENSMUST00000038665 Mier1Q5UAK0 511 aa13.1□□□□□ -0.31
Ptchd1-201ENSMUST00000038665 Lamc3Q9R0B6 1581 aa13.1□□□□□ -0.31
Ptchd1-201ENSMUST00000038665 Thoc2B1AZI6 1594 aaKnown RBP13.07□□□□□ -0.32
Ptchd1-201ENSMUST00000038665 Plekhg3Q4VAC9 1341 aa13.04□□□□□ -0.32
Ptchd1-201ENSMUST00000038665 Ubl4bQ9CQ84 188 aa13.03□□□□□ -0.32
Ptchd1-201ENSMUST00000038665 Ap3b1Q9Z1T1 1105 aa13.03□□□□□ -0.32
Ptchd1-201ENSMUST00000038665 Camsap1A2AHC3 1581 aa13.03□□□□□ -0.32
Ptchd1-201ENSMUST00000038665 Eif4g1Q6NZJ6 1600 aaKnown RBP13.01□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Dnajc5bQ9CQ94 199 aa13.01□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Arhgap35Q91YM2 1499 aa13.01□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Phldb1Q6PDH0 1371 aaKnown RBP12.99□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Cux2P70298 1426 aa12.99□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Zeb1Q64318 1117 aa12.99□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Clip1Q922J3 1391 aa12.97□□□□□ -0.33
Ptchd1-201ENSMUST00000038665 Shroom4Q1W617 1475 aa12.94□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Grin2bQ01097 1482 aa12.93□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 NrkQ9R0G8 1455 aa12.93□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Ccdc18Q640L5 1455 aa12.92□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Npm1Q61937 292 aaKnown RBP12.91□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Pcgf6Q99NA9 353 aa12.9□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Supt5hO55201 1082 aaKnown RBP12.9□□□□□ -0.34
Ptchd1-201ENSMUST00000038665 Fam135aQ6NS59 1506 aa12.88□□□□□ -0.35
Ptchd1-201ENSMUST00000038665 Baz1bQ9Z277 1479 aa12.88□□□□□ -0.35
Ptchd1-201ENSMUST00000038665 Arap1Q4LDD4 1452 aa12.87□□□□□ -0.35
Ptchd1-201ENSMUST00000038665 Setd5Q5XJV7 1441 aa12.82□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 LrpprcQ6PB66 1392 aaKnown RBP12.81□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 Mroh2bQ7M6Y6 1581 aa12.8□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 Eea1Q8BL66 1411 aa12.79□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 Duox2A2AQ99 1517 aa12.78□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 AqrQ8CFQ3 1481 aaKnown RBP12.78□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 PogzQ8BZH4 1409 aaKnown RBP12.77□□□□□ -0.36
Ptchd1-201ENSMUST00000038665 Dhx29Q6PGC1 1365 aaKnown RBP12.76□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Lmod2Q3UHZ5 550 aa12.76□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Rad54l2Q99NG0 1466 aa12.76□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Samd9lQ69Z37 1561 aa12.75□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 NefmP08553 848 aa12.75□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Map3k1P53349 1493 aa12.75□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Ankrd26Q811D2 1581 aa12.74□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Cux1P53564 1515 aa12.73□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Arhgef5E9Q7D5 1581 aa12.73□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Ppargc1bQ8VHJ7 1014 aa12.71□□□□□ -0.37
Ptchd1-201ENSMUST00000038665 Kif21aQ9QXL2 1672 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms