RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	OYE2	Q03558	400 aa	Known RBP	4.61	□□□□□ -1.67
snR35	snR35	Q0182	Q9ZZW1	134 aa		4.61	□□□□□ -1.67
snR35	snR35	YBR287W	P38355	427 aa		4.6	□□□□□ -1.67
snR35	snR35	CIC1	P38779	376 aa	Known RBP	4.6	□□□□□ -1.67
snR35	snR35	NTA1	P40354	457 aa		4.6	□□□□□ -1.67
snR35	snR35	RAD55	P38953	406 aa		4.59	□□□□□ -1.67
snR35	snR35	FIR1	P40020	876 aa		4.59	□□□□□ -1.67
snR35	snR35	QDR2	P40474	542 aa		4.59	□□□□□ -1.67
snR35	snR35	PTK2	P47116	818 aa	Known RBP	4.59	□□□□□ -1.67
snR35	snR35	YNL165W	P53891	406 aa		4.59	□□□□□ -1.67
snR35	snR35	RPS31	P05759	152 aa	Known RBP	4.58	□□□□□ -1.68
snR35	snR35	IRE1	P32361	1115 aa		4.58	□□□□□ -1.68
snR35	snR35	DAL1	P32375	460 aa		4.58	□□□□□ -1.68
snR35	snR35	KAP122	P32767	1081 aa		4.58	□□□□□ -1.68
snR35	snR35	RPT1	P33299	467 aa	Known RBP	4.58	□□□□□ -1.68
snR35	snR35	MET1	P36150	593 aa		4.58	□□□□□ -1.68
snR35	snR35	AIR1	P40507	360 aa	Known RBP	4.58	□□□□□ -1.68
snR35	snR35	DAK2	P43550	591 aa		4.58	□□□□□ -1.68
snR35	snR35	NUP85	P46673	744 aa		4.58	□□□□□ -1.68
snR35	snR35	SRF1	Q12516	437 aa		4.58	□□□□□ -1.68
snR35	snR35	LEU1	P07264	779 aa	Known RBP	4.57	□□□□□ -1.68
snR35	snR35	RPC31	P17890	251 aa		4.57	□□□□□ -1.68
snR35	snR35	MSN1	P22148	382 aa		4.57	□□□□□ -1.68
snR35	snR35	SLA1	P32790	1244 aa		4.57	□□□□□ -1.68
snR35	snR35	IRS4	P36115	615 aa	Known RBP	4.57	□□□□□ -1.68
snR35	snR35	SHM1	P37292	490 aa	Predicted RBP	4.57	□□□□□ -1.68
snR35	snR35	ISW1	P38144	1129 aa		4.57	□□□□□ -1.68
snR35	snR35	RGA1	P39083	1007 aa		4.57	□□□□□ -1.68
snR35	snR35	BSC2	Q05611	235 aa		4.57	□□□□□ -1.68
snR35	snR35	NOC3	Q07896	663 aa	Predicted RBP	4.57	□□□□□ -1.68
snR35	snR35	YOR296W	Q08748	1289 aa		4.57	□□□□□ -1.68
snR35	snR35	OXR1	Q08952	273 aa		4.57	□□□□□ -1.68
snR35	snR35	GIP1	P38229	639 aa		4.56	□□□□□ -1.68
snR35	snR35	PSY2	P40164	858 aa		4.56	□□□□□ -1.68
snR35	snR35	FYV10	P40492	516 aa		4.56	□□□□□ -1.68
snR35	snR35	RGD2	P43556	714 aa		4.56	□□□□□ -1.68
snR35	snR35	YJR098C	P47139	656 aa		4.56	□□□□□ -1.68
snR35	snR35	YJR115W	P47152	169 aa		4.56	□□□□□ -1.68
snR35	snR35	LSC2	P53312	427 aa		4.56	□□□□□ -1.68
snR35	snR35	TY1A-DR3	Q12441	440 aa		4.56	□□□□□ -1.68
snR35	snR35	PDC6	P26263	563 aa	Known RBP	4.55	□□□□□ -1.68
snR35	snR35	MTO1	P53070	669 aa		4.55	□□□□□ -1.68
snR35	snR35	YGR122W	P53272	402 aa		4.55	□□□□□ -1.68
snR35	snR35	ESF1	Q06344	628 aa	Known RBP	4.55	□□□□□ -1.68
snR35	snR35	PSH1	Q12161	406 aa		4.55	□□□□□ -1.68
snR35	snR35	TIF6	Q12522	245 aa	Known RBP	4.55	□□□□□ -1.68
snR35	snR35	DPS1	P04802	557 aa	Known RBP	4.54	□□□□□ -1.68
snR35	snR35	DLD1	P32891	587 aa		4.54	□□□□□ -1.68
snR35	snR35	SKP1	P52286	194 aa		4.54	□□□□□ -1.68
snR35	snR35	RPP1A	P05318	106 aa	Predicted RBP	4.53	□□□□□ -1.68
snR35	snR35	RGP1	P16664	663 aa		4.53	□□□□□ -1.68
snR35	snR35	CLN2	P20438	545 aa		4.53	□□□□□ -1.68
snR35	snR35	MCM2	P29469	868 aa		4.53	□□□□□ -1.68
snR35	snR35	BSD2	P38356	321 aa		4.53	□□□□□ -1.68
snR35	snR35	NNF1	P47149	201 aa		4.53	□□□□□ -1.68
snR35	snR35	UBP15	P50101	1230 aa		4.53	□□□□□ -1.68
snR35	snR35	JIP5	Q06214	492 aa	Predicted RBP	4.53	□□□□□ -1.68
snR35	snR35	FLP1	P03870	423 aa		4.52	□□□□□ -1.69
snR35	snR35	HXK1	P04806	485 aa	Known RBP	4.52	□□□□□ -1.69
snR35	snR35	CYC8	P14922	966 aa		4.52	□□□□□ -1.69
snR35	snR35	OCA5	P38738	679 aa		4.52	□□□□□ -1.69
snR35	snR35	AIM46	P38885	310 aa		4.52	□□□□□ -1.69
snR35	snR35	SPR28	Q04921	423 aa		4.52	□□□□□ -1.69
snR35	snR35	YTA7	P40340	1379 aa		4.52	□□□□□ -1.69
snR35	snR35	KAR2	P16474	682 aa	Known RBP	4.51	□□□□□ -1.69
snR35	snR35	MNR2	P35724	969 aa		4.51	□□□□□ -1.69
snR35	snR35	YHL008C	P38750	627 aa		4.51	□□□□□ -1.69
snR35	snR35	RPS26A	P39938	119 aa	Known RBP	4.51	□□□□□ -1.69
snR35	snR35	RPS26B	P39939	119 aa	Known RBP	4.51	□□□□□ -1.69
snR35	snR35	UBP2	Q01476	1272 aa		4.51	□□□□□ -1.69
snR35	snR35	CUS1	Q02554	436 aa	Predicted RBP	4.51	□□□□□ -1.69
snR35	snR35	MSH6	Q03834	1242 aa		4.51	□□□□□ -1.69
snR35	snR35	YCS4	Q06156	1176 aa		4.51	□□□□□ -1.69
snR35	snR35	INP54	Q08227	384 aa	Known RBP	4.51	□□□□□ -1.69
snR35	snR35	TCB1	Q12466	1186 aa		4.51	□□□□□ -1.69
snR35	snR35	CDC19	P00549	500 aa	Known RBP	4.5	□□□□□ -1.69
snR35	snR35	RAD2	P07276	1031 aa		4.5	□□□□□ -1.69
snR35	snR35	TRK1	P12685	1235 aa		4.5	□□□□□ -1.69
snR35	snR35	APM2	P38700	605 aa		4.5	□□□□□ -1.69
snR35	snR35	MAD1	P40957	749 aa		4.5	□□□□□ -1.69
snR35	snR35	VPS16	Q03308	798 aa		4.5	□□□□□ -1.69
snR35	snR35	YLR346C	Q06139	101 aa		4.5	□□□□□ -1.69
snR35	snR35	MAG2	Q06436	670 aa	Known RBP	4.5	□□□□□ -1.69
snR35	snR35	PIN2	Q12057	282 aa		4.5	□□□□□ -1.69
snR35	snR35	MCD1	Q12158	566 aa		4.5	□□□□□ -1.69
snR35	snR35	PEP7	P32609	515 aa		4.49	□□□□□ -1.69
snR35	snR35	PRP40	P33203	583 aa	Known RBP	4.49	□□□□□ -1.69
snR35	snR35	ECM2	P38241	364 aa	Known RBP	4.49	□□□□□ -1.69
snR35	snR35	YIL165C	P40446	119 aa		4.49	□□□□□ -1.69
snR35	snR35	DAL4	Q04895	635 aa		4.49	□□□□□ -1.69
snR35	snR35	EMG1	Q06287	252 aa	Known RBP	4.49	□□□□□ -1.69
snR35	snR35	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
snR35	snR35	PET112	P33893	541 aa		4.48	□□□□□ -1.69
snR35	snR35	GLY1	P37303	387 aa	Known RBP	4.48	□□□□□ -1.69
snR35	snR35	NCL1	P38205	684 aa	Known RBP	4.48	□□□□□ -1.69
snR35	snR35	FAA3	P39002	694 aa		4.48	□□□□□ -1.69
snR35	snR35	YER156C	P40093	338 aa	Known RBP	4.48	□□□□□ -1.69
snR35	snR35	MRPS18	P42847	217 aa		4.48	□□□□□ -1.69
snR35	snR35	ITC1	P53125	1264 aa		4.48	□□□□□ -1.69
snR35	snR35	CTR9	P89105	1077 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms