RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 DRS1P32892 752 aaKnown RBP9.15□□□□□ -0.94
snR35snR35 MTC1P47018 478 aaKnown RBP8.88□□□□□ -0.99
snR35snR35 BFR2Q06631 534 aaKnown RBP8.04□□□□□ -1.12
snR35snR35 TFA1P36100 482 aa7.78□□□□□ -1.16
snR35snR35 DIP2Q12220 943 aaPredicted RBP7.71□□□□□ -1.18
snR35snR35 AVT3P36062 692 aa7.7□□□□□ -1.18
snR35snR35 RSE1Q04693 1361 aaKnown RBP7.23□□□□□ -1.25
snR35snR35 ISW2Q08773 1120 aa7.18□□□□□ -1.26
snR35snR35 RPG1P38249 964 aaKnown RBP7.03□□□□□ -1.28
snR35snR35 PRI1P10363 409 aa6.99□□□□□ -1.29
snR35snR35 FAP1P53971 965 aa6.94□□□□□ -1.3
snR35snR35 RQC2Q12532 1038 aaKnown RBP6.92□□□□□ -1.3
snR35snR35 RPL17AP05740 184 aaKnown RBP6.91□□□□□ -1.3
snR35snR35 RPL17BP46990 184 aaKnown RBP6.91□□□□□ -1.3
snR35snR35 AAD16Q02895 342 aa6.84□□□□□ -1.31
snR35snR35 REB1P21538 810 aa6.81□□□□□ -1.32
snR35snR35 SPT21P35209 758 aa6.71□□□□□ -1.34
snR35snR35 RIM101P33400 625 aa6.68□□□□□ -1.34
snR35snR35 TSR3Q12094 313 aaKnown RBP6.61□□□□□ -1.35
snR35snR35 PTP3P40048 928 aa6.54□□□□□ -1.36
snR35snR35 SSP1P38871 571 aa6.48□□□□□ -1.37
snR35snR35 PRY3P47033 881 aa6.48□□□□□ -1.37
snR35snR35 OXP1P28273 1286 aa6.44□□□□□ -1.38
snR35snR35 DMA1P38823 416 aa6.44□□□□□ -1.38
snR35snR35 YKR023WP36119 530 aaKnown RBP6.41□□□□□ -1.38
snR35snR35 MRPL32P25348 183 aa6.39□□□□□ -1.39
snR35snR35 ARP8Q12386 881 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
snR35snR35 YIL055CP40523 627 aaKnown RBP6.37□□□□□ -1.39
snR35snR35 YAH1Q12184 172 aaKnown RBP6.35□□□□□ -1.39
snR35snR35 YLR271WQ06152 274 aa6.31□□□□□ -1.4
snR35snR35 TFC8Q12308 588 aa6.29□□□□□ -1.4
snR35snR35 RSM7P47150 247 aa6.28□□□□□ -1.4
snR35snR35 MGA2P40578 1113 aa6.25□□□□□ -1.41
snR35snR35 HOP09932 586 aa6.24□□□□□ -1.41
snR35snR35 HAA1Q12753 694 aaKnown RBP6.21□□□□□ -1.42
snR35snR35 CDC27P38042 758 aa6.2□□□□□ -1.42
snR35snR35 DCD1P06773 312 aa6.16□□□□□ -1.42
snR35snR35 PSD2P53037 1138 aaKnown RBP6.15□□□□□ -1.42
snR35snR35 AI2P03876 854 aa6.14□□□□□ -1.43
snR35snR35 YCK3P39962 524 aa6.14□□□□□ -1.43
snR35snR35 CST9Q06032 482 aa6.12□□□□□ -1.43
snR35snR35 BBC1P47068 1157 aa6.11□□□□□ -1.43
snR35snR35 BCH2P36122 765 aa6.1□□□□□ -1.43
snR35snR35 SAS10Q12136 610 aaPredicted RBP6.1□□□□□ -1.43
snR35snR35 LEO1P38439 464 aa6.06□□□□□ -1.44
snR35snR35 EPS1P40557 701 aa6.03□□□□□ -1.44
snR35snR35 TAF7Q05021 590 aa6.02□□□□□ -1.45
snR35snR35 LEU3P08638 886 aa6.01□□□□□ -1.45
snR35snR35 UBP10P53874 792 aaPredicted RBP5.99□□□□□ -1.45
snR35snR35 BDF1P35817 686 aa5.97□□□□□ -1.45
snR35snR35 RAM2P29703 316 aa5.96□□□□□ -1.46
snR35snR35 MRM1P25270 412 aa5.95□□□□□ -1.46
snR35snR35 SCY1P53009 804 aa5.95□□□□□ -1.46
snR35snR35 RTG3P38165 486 aa5.91□□□□□ -1.46
snR35snR35 IFH1P39520 1085 aa5.91□□□□□ -1.46
snR35snR35 YGL015CP33199 130 aa5.9□□□□□ -1.46
snR35snR35 MAP2P38174 421 aaKnown RBP5.9□□□□□ -1.46
snR35snR35 SET1P38827 1080 aaKnown RBP5.9□□□□□ -1.46
snR35snR35 YPR148CQ06523 435 aa5.89□□□□□ -1.47
snR35snR35 MAK11P20484 414 aaKnown RBP5.88□□□□□ -1.47
snR35snR35 RCR1P38212 213 aa5.88□□□□□ -1.47
snR35snR35 CKB1P43639 278 aa5.87□□□□□ -1.47
snR35snR35 SLX5P32828 619 aaKnown RBP5.85□□□□□ -1.47
snR35snR35 NOP53Q12080 455 aaKnown RBP5.82□□□□□ -1.48
snR35snR35 VPS29P38759 282 aa5.81□□□□□ -1.48
snR35snR35 RPN1P38764 993 aaKnown RBP5.81□□□□□ -1.48
snR35snR35 VPS70P47161 811 aa5.81□□□□□ -1.48
snR35snR35 YMR1P47147 688 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
snR35snR35 SPB4P25808 606 aaPredicted RBP5.78□□□□□ -1.48
snR35snR35 COQ8P27697 501 aa5.77□□□□□ -1.49
snR35snR35 NSR1P27476 414 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
snR35snR35 DSF2P38213 736 aa5.73□□□□□ -1.49
snR35snR35 STS1P38637 319 aa5.73□□□□□ -1.49
snR35snR35 TIF4632P39936 914 aaKnown RBP5.72□□□□□ -1.49
snR35snR35 PBS2P08018 668 aa5.7□□□□□ -1.5
snR35snR35 DBP1P24784 617 aaKnown RBP5.7□□□□□ -1.5
snR35snR35 MIF2P35201 549 aa5.7□□□□□ -1.5
snR35snR35 YOR238WQ08634 303 aa5.7□□□□□ -1.5
snR35snR35 EDS1P38073 919 aa5.69□□□□□ -1.5
snR35snR35 TGL3P40308 642 aa5.68□□□□□ -1.5
snR35snR35 YAP5P40574 245 aa5.67□□□□□ -1.5
snR35snR35 REF2P42073 533 aaPredicted RBP5.67□□□□□ -1.5
snR35snR35 YFR006WP43590 535 aa5.66□□□□□ -1.5
snR35snR35 YNR021WP53723 404 aaKnown RBP5.66□□□□□ -1.5
snR35snR35 MAK21Q12176 1025 aaKnown RBP5.65□□□□□ -1.5
snR35snR35 PTC3P34221 468 aaKnown RBP5.64□□□□□ -1.51
snR35snR35 MAM3Q12296 706 aa5.64□□□□□ -1.51
snR35snR35 VMA1P17255 1071 aaKnown RBP5.61□□□□□ -1.51
snR35snR35 AIM7Q12156 149 aa5.6□□□□□ -1.51
snR35snR35 COX6P00427 148 aa5.59□□□□□ -1.51
snR35snR35 IES2P40154 320 aa5.59□□□□□ -1.51
snR35snR35 DMA2P53924 522 aa5.59□□□□□ -1.51
snR35snR35 GUT1P32190 709 aa5.57□□□□□ -1.52
snR35snR35 NUP42P49686 430 aaKnown RBP5.57□□□□□ -1.52
snR35snR35 SAM3Q08986 587 aa5.57□□□□□ -1.52
snR35snR35 GRE2Q12068 342 aaKnown RBP5.57□□□□□ -1.52
snR35snR35 KIN1P13185 1064 aa5.56□□□□□ -1.52
snR35snR35 ATH1P48016 1211 aa5.56□□□□□ -1.52
snR35snR35 PIB1Q06651 286 aa5.56□□□□□ -1.52
snR35snR35 MST1P07236 462 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms