RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W PDC6P26263 563 aaKnown RBP3.75□□□□□ -1.81
BRO1YPL084W MET4P32389 672 aa3.75□□□□□ -1.81
BRO1YPL084W ASF1P32447 279 aa3.75□□□□□ -1.81
BRO1YPL084W KAP122P32767 1081 aa3.75□□□□□ -1.81
BRO1YPL084W SNU71P53207 620 aaKnown RBP3.75□□□□□ -1.81
BRO1YPL084W UBP2Q01476 1272 aa3.75□□□□□ -1.81
BRO1YPL084W PSH1Q12161 406 aa3.75□□□□□ -1.81
BRO1YPL084W MNL2Q12205 849 aa3.75□□□□□ -1.81
BRO1YPL084W FIR1P40020 876 aa3.75□□□□□ -1.81
BRO1YPL084W YLR346CQ06139 101 aa3.75□□□□□ -1.81
BRO1YPL084W OPT2Q06593 877 aa3.75□□□□□ -1.81
BRO1YPL084W MSN1P22148 382 aa3.74□□□□□ -1.81
BRO1YPL084W SMC1P32908 1225 aa3.74□□□□□ -1.81
BRO1YPL084W YNL011CP53980 444 aa3.74□□□□□ -1.81
BRO1YPL084W RAD55P38953 406 aa3.73□□□□□ -1.81
BRO1YPL084W UBP15P50101 1230 aa3.73□□□□□ -1.81
BRO1YPL084W RRP15Q06511 250 aaPredicted RBP3.73□□□□□ -1.81
BRO1YPL084W RPC31P17890 251 aa3.73□□□□□ -1.81
BRO1YPL084W NAB2P32505 525 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
BRO1YPL084W MGE1P38523 228 aa3.73□□□□□ -1.81
BRO1YPL084W RGD2P43556 714 aa3.73□□□□□ -1.81
BRO1YPL084W LEU1P07264 779 aaKnown RBP3.72□□□□□ -1.81
BRO1YPL084W GIP1P38229 639 aa3.72□□□□□ -1.81
BRO1YPL084W BSD2P38356 321 aa3.72□□□□□ -1.81
BRO1YPL084W OSH7P38755 437 aa3.72□□□□□ -1.81
BRO1YPL084W NTA1P40354 457 aa3.72□□□□□ -1.81
BRO1YPL084W NOP7P53261 605 aaKnown RBP3.72□□□□□ -1.81
BRO1YPL084W CDC55Q00362 526 aa3.72□□□□□ -1.81
BRO1YPL084W PHO4P07270 312 aaKnown RBP3.72□□□□□ -1.81
BRO1YPL084W SEC8P32855 1065 aa3.72□□□□□ -1.81
BRO1YPL084W ISW1P38144 1129 aa3.72□□□□□ -1.81
BRO1YPL084W CUS1Q02554 436 aaPredicted RBP3.72□□□□□ -1.81
BRO1YPL084W CDC19P00549 500 aaKnown RBP3.71□□□□□ -1.82
BRO1YPL084W RPT1P33299 467 aaKnown RBP3.71□□□□□ -1.82
BRO1YPL084W DAK2P43550 591 aa3.71□□□□□ -1.82
BRO1YPL084W SCW11P53189 542 aa3.71□□□□□ -1.82
BRO1YPL084W RSC4Q02206 625 aa3.71□□□□□ -1.82
BRO1YPL084W YOR296WQ08748 1289 aa3.71□□□□□ -1.82
BRO1YPL084W TIF6Q12522 245 aaKnown RBP3.71□□□□□ -1.82
BRO1YPL084W RGP1P16664 663 aa3.71□□□□□ -1.82
BRO1YPL084W IRS4P36115 615 aaKnown RBP3.71□□□□□ -1.82
BRO1YPL084W MRPL16P38064 232 aa3.71□□□□□ -1.82
BRO1YPL084W PSY2P40164 858 aa3.71□□□□□ -1.82
BRO1YPL084W OYE2Q03558 400 aaKnown RBP3.71□□□□□ -1.82
BRO1YPL084W BSC2Q05611 235 aa3.71□□□□□ -1.82
BRO1YPL084W TY1A-BLQ12266 440 aa3.71□□□□□ -1.82
BRO1YPL084W GLY1P37303 387 aaKnown RBP3.7□□□□□ -1.82
BRO1YPL084W YBR287WP38355 427 aa3.7□□□□□ -1.82
BRO1YPL084W STB3Q12427 513 aa3.7□□□□□ -1.82
BRO1YPL084W GCD6P32501 712 aaKnown RBP3.7□□□□□ -1.82
BRO1YPL084W PAM1P37304 830 aaKnown RBP3.7□□□□□ -1.82
BRO1YPL084W APM2P38700 605 aa3.7□□□□□ -1.82
BRO1YPL084W SAM37P50110 327 aa3.7□□□□□ -1.82
BRO1YPL084W SKP1P52286 194 aa3.7□□□□□ -1.82
BRO1YPL084W NAM8Q00539 523 aaKnown RBP3.69□□□□□ -1.82
BRO1YPL084W NOC3Q07896 663 aaPredicted RBP3.69□□□□□ -1.82
BRO1YPL084W MET22P32179 357 aa3.69□□□□□ -1.82
BRO1YPL084W MET1P36150 593 aa3.69□□□□□ -1.82
BRO1YPL084W AIM46P38885 310 aa3.69□□□□□ -1.82
BRO1YPL084W YJR107WP47145 328 aa3.69□□□□□ -1.82
BRO1YPL084W YDR444WQ04093 687 aa3.69□□□□□ -1.82
BRO1YPL084W EMG1Q06287 252 aaKnown RBP3.69□□□□□ -1.82
BRO1YPL084W VPS35P34110 944 aa3.68□□□□□ -1.82
BRO1YPL084W MET10P39692 1035 aa3.68□□□□□ -1.82
BRO1YPL084W ITC1P53125 1264 aa3.68□□□□□ -1.82
BRO1YPL084W YNR040WP53736 256 aa3.68□□□□□ -1.82
BRO1YPL084W LCB5Q06147 687 aaKnown RBP3.68□□□□□ -1.82
BRO1YPL084W INP54Q08227 384 aaKnown RBP3.68□□□□□ -1.82
BRO1YPL084W YHL008CP38750 627 aa3.68□□□□□ -1.82
BRO1YPL084W CIC1P38779 376 aaKnown RBP3.68□□□□□ -1.82
BRO1YPL084W YIL165CP40446 119 aa3.68□□□□□ -1.82
BRO1YPL084W MCM2P29469 868 aa3.67□□□□□ -1.82
BRO1YPL084W NCL1P38205 684 aaKnown RBP3.67□□□□□ -1.82
BRO1YPL084W OXR1Q08952 273 aa3.67□□□□□ -1.82
BRO1YPL084W FYV10P40492 516 aa3.67□□□□□ -1.82
BRO1YPL084W ROG3P43602 733 aa3.67□□□□□ -1.82
BRO1YPL084W CTR9P89105 1077 aa3.66□□□□□ -1.82
BRO1YPL084W SPR28Q04921 423 aa3.66□□□□□ -1.82
BRO1YPL084W RPP1AP05318 106 aaPredicted RBP3.66□□□□□ -1.82
BRO1YPL084W DIT1P21623 536 aa3.66□□□□□ -1.82
BRO1YPL084W ECM2P38241 364 aaKnown RBP3.66□□□□□ -1.82
BRO1YPL084W CUZ1P53899 274 aa3.66□□□□□ -1.82
BRO1YPL084W YMR265CQ03508 461 aaKnown RBP3.66□□□□□ -1.82
BRO1YPL084W TY1A-MR1Q04215 440 aa3.66□□□□□ -1.82
BRO1YPL084W TOS4Q06266 489 aa3.66□□□□□ -1.82
BRO1YPL084W FLP1P03870 423 aa3.65□□□□□ -1.83
BRO1YPL084W RPS26AP39938 119 aaKnown RBP3.65□□□□□ -1.83
BRO1YPL084W RPS26BP39939 119 aaKnown RBP3.65□□□□□ -1.83
BRO1YPL084W KRE33P53914 1056 aaKnown RBP3.65□□□□□ -1.83
BRO1YPL084W COBP00163 385 aa3.64□□□□□ -1.83
BRO1YPL084W FPS1P23900 669 aa3.64□□□□□ -1.83
BRO1YPL084W PYC2P32327 1180 aaKnown RBP3.64□□□□□ -1.83
BRO1YPL084W PEP7P32609 515 aa3.64□□□□□ -1.83
BRO1YPL084W ADE12P80210 433 aaKnown RBP3.64□□□□□ -1.83
BRO1YPL084W DAL4Q04895 635 aa3.64□□□□□ -1.83
BRO1YPL084W YCS4Q06156 1176 aa3.64□□□□□ -1.83
BRO1YPL084W JIP5Q06214 492 aaPredicted RBP3.64□□□□□ -1.83
BRO1YPL084W YIR007WP40566 764 aa3.64□□□□□ -1.83
BRO1YPL084W CAF120P53836 1060 aa3.64□□□□□ -1.83
BRO1YPL084W SVF1Q05515 481 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms