RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C YJL171CP46992 396 aa11.04□□□□□ -0.64
PUP1YOR157C SWI1P09547 1314 aa11.04□□□□□ -0.64
PUP1YOR157C PRY3P47033 881 aa11.03□□□□□ -0.64
PUP1YOR157C YOL057WQ08225 711 aa11.03□□□□□ -0.64
PUP1YOR157C ACK1Q07622 623 aaPredicted RBP11.02□□□□□ -0.65
PUP1YOR157C PPM2Q08282 695 aa11.02□□□□□ -0.65
PUP1YOR157C IXR1P33417 597 aa11.01□□□□□ -0.65
PUP1YOR157C VPS62P53285 467 aa11.01□□□□□ -0.65
PUP1YOR157C DNM1P54861 757 aa11.01□□□□□ -0.65
PUP1YOR157C MAM1P40065 302 aa11□□□□□ -0.65
PUP1YOR157C YMR084WA2P2R3 262 aa10.99□□□□□ -0.65
PUP1YOR157C ERG7P38604 731 aa10.99□□□□□ -0.65
PUP1YOR157C KEL1P38853 1164 aaKnown RBP10.99□□□□□ -0.65
PUP1YOR157C ITC1P53125 1264 aa10.99□□□□□ -0.65
PUP1YOR157C WRS1Q12109 432 aaKnown RBP10.99□□□□□ -0.65
PUP1YOR157C FLO1P32768 1537 aa10.99□□□□□ -0.65
PUP1YOR157C LDH1P38139 375 aa10.98□□□□□ -0.65
PUP1YOR157C JJJ2P46997 583 aa10.98□□□□□ -0.65
PUP1YOR157C PRD1P25375 712 aa10.97□□□□□ -0.65
PUP1YOR157C CST6P40535 587 aa10.97□□□□□ -0.65
PUP1YOR157C SRC1Q03707 834 aa10.97□□□□□ -0.65
PUP1YOR157C SAC3P46674 1301 aa10.96□□□□□ -0.65
PUP1YOR157C NUP133P36161 1157 aa10.96□□□□□ -0.65
PUP1YOR157C TPS3P38426 1054 aaKnown RBP10.96□□□□□ -0.65
PUP1YOR157C RTR1P40084 226 aaPredicted RBP10.96□□□□□ -0.65
PUP1YOR157C EAR1Q03212 550 aa10.96□□□□□ -0.65
PUP1YOR157C ATG1P53104 897 aa10.95□□□□□ -0.66
PUP1YOR157C PSH1Q12161 406 aa10.95□□□□□ -0.66
PUP1YOR157C FIR1P40020 876 aa10.94□□□□□ -0.66
PUP1YOR157C DUR1,2P32528 1835 aaKnown RBP10.93□□□□□ -0.66
PUP1YOR157C RPT3P33298 428 aaKnown RBP10.93□□□□□ -0.66
PUP1YOR157C YJR008WP47085 338 aa10.93□□□□□ -0.66
PUP1YOR157C YDR306CQ06640 478 aa10.93□□□□□ -0.66
PUP1YOR157C RAD53P22216 821 aa10.92□□□□□ -0.66
PUP1YOR157C SET1P38827 1080 aaKnown RBP10.91□□□□□ -0.66
PUP1YOR157C NET1P47035 1189 aa10.91□□□□□ -0.66
PUP1YOR157C PUS6P53294 404 aa10.91□□□□□ -0.66
PUP1YOR157C ADR1P07248 1323 aa10.9□□□□□ -0.66
PUP1YOR157C GYP7P48365 746 aa10.9□□□□□ -0.66
PUP1YOR157C ECM30Q06673 1274 aa10.9□□□□□ -0.66
PUP1YOR157C HXT10P43581 546 aa10.89□□□□□ -0.67
PUP1YOR157C RTT109Q07794 436 aa10.89□□□□□ -0.67
PUP1YOR157C YDJ1P25491 409 aaKnown RBP10.88□□□□□ -0.67
PUP1YOR157C IOC4Q04213 475 aa10.88□□□□□ -0.67
PUP1YOR157C THI22Q06490 572 aa10.88□□□□□ -0.67
PUP1YOR157C PSF3Q12146 194 aa10.88□□□□□ -0.67
PUP1YOR157C PMA1P05030 918 aaKnown RBP10.87□□□□□ -0.67
PUP1YOR157C MRP7P12687 371 aa10.87□□□□□ -0.67
PUP1YOR157C CDC60P26637 1090 aaKnown RBP10.87□□□□□ -0.67
PUP1YOR157C WHI3P34761 661 aaKnown RBP10.87□□□□□ -0.67
PUP1YOR157C SPT21P35209 758 aa10.87□□□□□ -0.67
PUP1YOR157C OCT1P35999 772 aa10.87□□□□□ -0.67
PUP1YOR157C YFH7P43591 353 aa10.87□□□□□ -0.67
PUP1YOR157C CFT2Q12102 859 aaPredicted RBP10.87□□□□□ -0.67
PUP1YOR157C SUP35P05453 685 aaKnown RBP10.86□□□□□ -0.67
PUP1YOR157C ADP1P25371 1049 aa10.86□□□□□ -0.67
PUP1YOR157C YOR131CQ12486 218 aa10.86□□□□□ -0.67
PUP1YOR157C YDR034W-BQ6Q5X2 51 aa10.86□□□□□ -0.67
PUP1YOR157C MCD4P36051 919 aa10.85□□□□□ -0.67
PUP1YOR157C ACA1P39970 489 aa10.85□□□□□ -0.67
PUP1YOR157C NUG1P40010 520 aaKnown RBP10.85□□□□□ -0.67
PUP1YOR157C YGR122WP53272 402 aa10.85□□□□□ -0.67
PUP1YOR157C YPL034WQ03083 165 aa10.85□□□□□ -0.67
PUP1YOR157C TY3A-GQ12173 290 aa10.85□□□□□ -0.67
PUP1YOR157C AHC1Q12433 566 aa10.85□□□□□ -0.67
PUP1YOR157C TY3A-IQ99219 290 aa10.85□□□□□ -0.67
PUP1YOR157C UIP5P36137 443 aa10.84□□□□□ -0.67
PUP1YOR157C SRT1Q03175 343 aa10.84□□□□□ -0.67
PUP1YOR157C MTC5Q03897 1148 aa10.84□□□□□ -0.67
PUP1YOR157C HIP1P06775 603 aa10.83□□□□□ -0.68
PUP1YOR157C BRE5P53741 515 aaKnown RBP10.83□□□□□ -0.68
PUP1YOR157C SRS2P12954 1174 aa10.82□□□□□ -0.68
PUP1YOR157C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
PUP1YOR157C SNU66Q12420 587 aaPredicted RBP10.82□□□□□ -0.68
PUP1YOR157C SWC3P31376 625 aa10.81□□□□□ -0.68
PUP1YOR157C AFG3P39925 761 aa10.81□□□□□ -0.68
PUP1YOR157C YFL040WP43562 540 aa10.81□□□□□ -0.68
PUP1YOR157C APL6P46682 809 aa10.81□□□□□ -0.68
PUP1YOR157C ICL2Q12031 575 aa10.81□□□□□ -0.68
PUP1YOR157C SUT2Q12286 268 aa10.81□□□□□ -0.68
PUP1YOR157C TUB2P02557 457 aaKnown RBP10.8□□□□□ -0.68
PUP1YOR157C MAM3Q12296 706 aa10.8□□□□□ -0.68
PUP1YOR157C YBL028CP38202 106 aa10.79□□□□□ -0.68
PUP1YOR157C SNF3P10870 884 aa10.78□□□□□ -0.68
PUP1YOR157C YIR042CP40586 236 aa10.78□□□□□ -0.68
PUP1YOR157C LYS14P40971 790 aa10.78□□□□□ -0.68
PUP1YOR157C MPP10P47083 593 aaKnown RBP10.78□□□□□ -0.68
PUP1YOR157C NSG2P53898 299 aa10.78□□□□□ -0.68
PUP1YOR157C UBP12P39538 1254 aa10.77□□□□□ -0.69
PUP1YOR157C VAB2P40003 282 aa10.77□□□□□ -0.69
PUP1YOR157C YJL007CP47080 104 aa10.77□□□□□ -0.69
PUP1YOR157C PTK1P36002 662 aaPredicted RBP10.76□□□□□ -0.69
PUP1YOR157C AIM21P40563 679 aa10.76□□□□□ -0.69
PUP1YOR157C MDM20Q12387 796 aaKnown RBP10.76□□□□□ -0.69
PUP1YOR157C MDL2P33311 773 aa10.75□□□□□ -0.69
PUP1YOR157C FMP30Q02883 468 aa10.75□□□□□ -0.69
PUP1YOR157C YJR107WP47145 328 aa10.74□□□□□ -0.69
PUP1YOR157C HEF3P53978 1044 aaKnown RBP10.74□□□□□ -0.69
PUP1YOR157C INM2Q05533 292 aa10.74□□□□□ -0.69
PUP1YOR157C PRE10P21242 288 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms