RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C YPL191CQ08930 360 aa3.75□□□□□ -1.81
SQS1YNL224C SLP1Q12232 587 aa3.75□□□□□ -1.81
SQS1YNL224C RRP36Q12481 300 aaPredicted RBP3.75□□□□□ -1.81
SQS1YNL224C TUF1P02992 437 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C STE11P23561 717 aa3.75□□□□□ -1.81
SQS1YNL224C ILV3P39522 585 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C IRR1P40541 1150 aa3.75□□□□□ -1.81
SQS1YNL224C IOC3P43596 787 aa3.75□□□□□ -1.81
SQS1YNL224C DAS1P47005 663 aa3.75□□□□□ -1.81
SQS1YNL224C CCM1P48237 864 aaPredicted RBP3.75□□□□□ -1.81
SQS1YNL224C YGR016WP53209 190 aa3.75□□□□□ -1.81
SQS1YNL224C ALG12P53730 551 aa3.75□□□□□ -1.81
SQS1YNL224C YNL247WP53852 767 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C RPN4Q03465 531 aa3.75□□□□□ -1.81
SQS1YNL224C ORM2Q06144 216 aa3.75□□□□□ -1.81
SQS1YNL224C YPR097WQ06839 1073 aa3.75□□□□□ -1.81
SQS1YNL224C YDL073WQ07454 984 aa3.75□□□□□ -1.81
SQS1YNL224C YIL002W-AQ3E7Z5 69 aa3.75□□□□□ -1.81
SQS1YNL224C LSO1Q3E827 93 aa3.75□□□□□ -1.81
SQS1YNL224C NAT1P12945 854 aaKnown RBP3.74□□□□□ -1.81
SQS1YNL224C RIM101P33400 625 aa3.74□□□□□ -1.81
SQS1YNL224C TIM54P47045 478 aa3.74□□□□□ -1.81
SQS1YNL224C GRC3Q07845 632 aa3.74□□□□□ -1.81
SQS1YNL224C BRR1Q99177 341 aaPredicted RBP3.74□□□□□ -1.81
SQS1YNL224C AAD3P25612 363 aa3.73□□□□□ -1.81
SQS1YNL224C SWC3P31376 625 aa3.73□□□□□ -1.81
SQS1YNL224C SLD2P34252 453 aa3.73□□□□□ -1.81
SQS1YNL224C RRF1P38771 230 aa3.73□□□□□ -1.81
SQS1YNL224C APE4P38821 490 aa3.73□□□□□ -1.81
SQS1YNL224C FMP10P40098 244 aa3.73□□□□□ -1.81
SQS1YNL224C SMC3P47037 1230 aa3.73□□□□□ -1.81
SQS1YNL224C NNF1P47149 201 aa3.73□□□□□ -1.81
SQS1YNL224C RSC1P53236 928 aa3.73□□□□□ -1.81
SQS1YNL224C SPP382Q06411 708 aaPredicted RBP3.73□□□□□ -1.81
SQS1YNL224C YOL098CQ12496 1037 aa3.73□□□□□ -1.81
SQS1YNL224C ATE1P16639 503 aa3.73□□□□□ -1.81
SQS1YNL224C HNM1P19807 563 aa3.73□□□□□ -1.81
SQS1YNL224C MED8P38304 223 aa3.73□□□□□ -1.81
SQS1YNL224C RRP8P38961 392 aaKnown RBP3.73□□□□□ -1.81
SQS1YNL224C MXR1P40029 184 aa3.73□□□□□ -1.81
SQS1YNL224C IES5P40060 125 aa3.73□□□□□ -1.81
SQS1YNL224C ACF4P47129 309 aa3.73□□□□□ -1.81
SQS1YNL224C YGR153WP48238 217 aa3.73□□□□□ -1.81
SQS1YNL224C ITC1P53125 1264 aa3.73□□□□□ -1.81
SQS1YNL224C BTN2P53286 410 aa3.73□□□□□ -1.81
SQS1YNL224C RTC4P53850 401 aa3.73□□□□□ -1.81
SQS1YNL224C CST9Q06032 482 aa3.73□□□□□ -1.81
SQS1YNL224C YAH1Q12184 172 aaKnown RBP3.73□□□□□ -1.81
SQS1YNL224C FAR1P21268 830 aa3.72□□□□□ -1.81
SQS1YNL224C PSO2P30620 661 aa3.72□□□□□ -1.81
SQS1YNL224C UTP18P40362 594 aaPredicted RBP3.72□□□□□ -1.81
SQS1YNL224C BUD27P43573 796 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SQS1YNL224C SET2P46995 733 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C RIM21P48565 533 aa3.72□□□□□ -1.81
SQS1YNL224C NUP42P49686 430 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C HOP2P53187 214 aa3.72□□□□□ -1.81
SQS1YNL224C ALF1P53904 254 aa3.72□□□□□ -1.81
SQS1YNL224C DBP9Q06218 594 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C YBL111CQ3E7Y5 667 aa3.72□□□□□ -1.81
SQS1YNL224C HMG1P12683 1054 aa3.72□□□□□ -1.81
SQS1YNL224C KAR3P17119 729 aa3.72□□□□□ -1.81
SQS1YNL224C GLC3P32775 704 aa3.72□□□□□ -1.81
SQS1YNL224C RPC37P36121 282 aa3.72□□□□□ -1.81
SQS1YNL224C SWD1P39706 426 aa3.72□□□□□ -1.81
SQS1YNL224C VID27P40157 782 aa3.72□□□□□ -1.81
SQS1YNL224C ATG32P40458 529 aa3.72□□□□□ -1.81
SQS1YNL224C SEC26P41810 973 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C ATG1P53104 897 aa3.72□□□□□ -1.81
SQS1YNL224C PNG1Q02890 363 aa3.72□□□□□ -1.81
SQS1YNL224C YDR286CQ05530 114 aa3.72□□□□□ -1.81
SQS1YNL224C CFT1Q06632 1357 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C YDJ1P25491 409 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C URA1P28272 314 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C ETP1P38748 585 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C IPL1P38991 367 aa3.71□□□□□ -1.82
SQS1YNL224C BUD6P41697 788 aa3.71□□□□□ -1.82
SQS1YNL224C BNA1P47096 177 aa3.71□□□□□ -1.82
SQS1YNL224C PIF1P07271 859 aa3.71□□□□□ -1.82
SQS1YNL224C EUG1P32474 517 aa3.71□□□□□ -1.82
SQS1YNL224C PPG1P32838 368 aa3.71□□□□□ -1.82
SQS1YNL224C NUF2P33895 451 aa3.71□□□□□ -1.82
SQS1YNL224C SAS3P34218 831 aa3.71□□□□□ -1.82
SQS1YNL224C COY1P34237 679 aa3.71□□□□□ -1.82
SQS1YNL224C APL2P36000 726 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C TBS1P38114 1094 aa3.71□□□□□ -1.82
SQS1YNL224C ECM1P39715 212 aa3.71□□□□□ -1.82
SQS1YNL224C SDS3P40505 327 aa3.71□□□□□ -1.82
SQS1YNL224C SRB7P47822 140 aa3.71□□□□□ -1.82
SQS1YNL224C SNZ1Q03148 297 aa3.71□□□□□ -1.82
SQS1YNL224C SXM1Q04175 944 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C RAD33Q04231 177 aa3.71□□□□□ -1.82
SQS1YNL224C SSQ1Q05931 657 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C UTP13Q05946 817 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C VIP1Q06685 1146 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C NOB1Q08444 459 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C YOR378WQ08902 515 aa3.71□□□□□ -1.82
SQS1YNL224C MCD1Q12158 566 aa3.71□□□□□ -1.82
SQS1YNL224C LEU1P07264 779 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C SRP54P20424 541 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C PUF4P25339 888 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms