RNA–Protein interactions for RNA: YNL112W

DBP2, Transcript of ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP2	YNL112W	FIG2	P25653	1609 aa		18.91	■□□□□ 0.62
DBP2	YNL112W	KRE2	P27809	442 aa		18.9	■□□□□ 0.62
DBP2	YNL112W	IME2	P32581	645 aa		18.9	■□□□□ 0.62
DBP2	YNL112W	HKR1	P41809	1802 aa		18.9	■□□□□ 0.62
DBP2	YNL112W	YIR042C	P40586	236 aa		18.89	■□□□□ 0.62
DBP2	YNL112W	IRC4	Q03036	179 aa		18.89	■□□□□ 0.61
DBP2	YNL112W	TRL1	P09880	827 aa	Known RBP	18.88	■□□□□ 0.61
DBP2	YNL112W	PIF1	P07271	859 aa		18.87	■□□□□ 0.61
DBP2	YNL112W	INM2	Q05533	292 aa		18.87	■□□□□ 0.61
DBP2	YNL112W	LCB1	P25045	558 aa	Known RBP	18.86	■□□□□ 0.61
DBP2	YNL112W	NUG1	P40010	520 aa	Known RBP	18.86	■□□□□ 0.61
DBP2	YNL112W	YKL222C	P35995	705 aa		18.85	■□□□□ 0.61
DBP2	YNL112W	RPT3	P33298	428 aa	Known RBP	18.85	■□□□□ 0.61
DBP2	YNL112W	KIN4	Q01919	800 aa		18.85	■□□□□ 0.61
DBP2	YNL112W	RET1	P22276	1149 aa	Known RBP	18.84	■□□□□ 0.61
DBP2	YNL112W	SET4	P42948	560 aa		18.84	■□□□□ 0.61
DBP2	YNL112W	LAM4	P38800	1345 aa		18.83	■□□□□ 0.6
DBP2	YNL112W	OSH3	P38713	996 aa	Known RBP	18.82	■□□□□ 0.6
DBP2	YNL112W	TOS4	Q06266	489 aa		18.82	■□□□□ 0.6
DBP2	YNL112W	BBC1	P47068	1157 aa		18.82	■□□□□ 0.6
DBP2	YNL112W	SRS2	P12954	1174 aa		18.81	■□□□□ 0.6
DBP2	YNL112W	GRX7	P38068	203 aa		18.81	■□□□□ 0.6
DBP2	YNL112W	KRI1	P42846	591 aa	Known RBP	18.81	■□□□□ 0.6
DBP2	YNL112W	PKH3	Q03306	898 aa	Predicted RBP	18.81	■□□□□ 0.6
DBP2	YNL112W	PGA3	Q12746	312 aa	Known RBP	18.8	■□□□□ 0.6
DBP2	YNL112W	CTT1	P06115	562 aa		18.79	■□□□□ 0.6
DBP2	YNL112W	OPI1	P21957	404 aa		18.78	■□□□□ 0.6
DBP2	YNL112W	AIM9	P40053	627 aa	Known RBP	18.78	■□□□□ 0.6
DBP2	YNL112W	KAR5	Q04746	504 aa		18.78	■□□□□ 0.6
DBP2	YNL112W	RNR2	P09938	399 aa	Known RBP	18.78	■□□□□ 0.6
DBP2	YNL112W	ICL1	P28240	557 aa	Predicted RBP	18.78	■□□□□ 0.6
DBP2	YNL112W	CIC1	P38779	376 aa	Known RBP	18.76	■□□□□ 0.59
DBP2	YNL112W	PTK1	P36002	662 aa	Predicted RBP	18.75	■□□□□ 0.59
DBP2	YNL112W	GSM1	P42950	618 aa		18.75	■□□□□ 0.59
DBP2	YNL112W	GRX6	Q12438	231 aa		18.75	■□□□□ 0.59
DBP2	YNL112W	GAS5	Q08193	484 aa		18.74	■□□□□ 0.59
DBP2	YNL112W	YER156C	P40093	338 aa	Known RBP	18.74	■□□□□ 0.59
DBP2	YNL112W	UBX2	Q04228	584 aa		18.74	■□□□□ 0.59
DBP2	YNL112W	TAH18	Q12181	623 aa		18.74	■□□□□ 0.59
DBP2	YNL112W	DJP1	P40564	432 aa		18.73	■□□□□ 0.59
DBP2	YNL112W	YFH7	P43591	353 aa		18.73	■□□□□ 0.59
DBP2	YNL112W	IRC8	P47046	822 aa		18.73	■□□□□ 0.59
DBP2	YNL112W	NPA3	P47122	385 aa		18.73	■□□□□ 0.59
DBP2	YNL112W	VPS20	Q04272	221 aa		18.72	■□□□□ 0.59
DBP2	YNL112W	JJJ2	P46997	583 aa		18.71	■□□□□ 0.59
DBP2	YNL112W	PPM2	Q08282	695 aa		18.71	■□□□□ 0.59
DBP2	YNL112W	YKU70	P32807	602 aa		18.71	■□□□□ 0.58
DBP2	YNL112W	CYB2	P00175	591 aa		18.69	■□□□□ 0.58
DBP2	YNL112W	ENP2	P48234	707 aa	Known RBP	18.69	■□□□□ 0.58
DBP2	YNL112W	WRS1	Q12109	432 aa	Known RBP	18.69	■□□□□ 0.58
DBP2	YNL112W	IMP2'	P32351	346 aa		18.68	■□□□□ 0.58
DBP2	YNL112W	MDL2	P33311	773 aa		18.68	■□□□□ 0.58
DBP2	YNL112W	MET1	P36150	593 aa		18.68	■□□□□ 0.58
DBP2	YNL112W	BOI1	P38041	980 aa	Known RBP	18.68	■□□□□ 0.58
DBP2	YNL112W	TSR3	Q12094	313 aa	Known RBP	18.68	■□□□□ 0.58
DBP2	YNL112W	TOP1	P04786	769 aa		18.67	■□□□□ 0.58
DBP2	YNL112W	TPM1	P17536	199 aa	Known RBP	18.67	■□□□□ 0.58
DBP2	YNL112W	COQ1	P18900	473 aa		18.67	■□□□□ 0.58
DBP2	YNL112W	VID28	P40547	921 aa		18.67	■□□□□ 0.58
DBP2	YNL112W	SNF3	P10870	884 aa		18.66	■□□□□ 0.58
DBP2	YNL112W	VPS24	P36095	224 aa	Known RBP	18.66	■□□□□ 0.58
DBP2	YNL112W	SPO22	P40511	975 aa		18.66	■□□□□ 0.58
DBP2	YNL112W	CHO2	P05374	869 aa	Known RBP	18.65	■□□□□ 0.58
DBP2	YNL112W	IOC3	P43596	787 aa		18.65	■□□□□ 0.58
DBP2	YNL112W	PRP42	Q03776	544 aa	Known RBP	18.65	■□□□□ 0.58
DBP2	YNL112W	FLO1	P32768	1537 aa		18.64	■□□□□ 0.58
DBP2	YNL112W	ARG82	P07250	355 aa		18.64	■□□□□ 0.57
DBP2	YNL112W	DPL1	Q05567	589 aa		18.64	■□□□□ 0.57
DBP2	YNL112W	PSF3	Q12146	194 aa		18.64	■□□□□ 0.57
DBP2	YNL112W	LSP1	Q12230	341 aa	Known RBP	18.64	■□□□□ 0.57
DBP2	YNL112W	PEP3	P27801	918 aa		18.63	■□□□□ 0.57
DBP2	YNL112W	EAF7	P53911	425 aa	Known RBP	18.63	■□□□□ 0.57
DBP2	YNL112W	FLO11	P08640	1367 aa		18.63	■□□□□ 0.57
DBP2	YNL112W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	18.63	■□□□□ 0.57	not detected
DBP2	YNL112W	YGL081W	P53156	320 aa		18.63	■□□□□ 0.57
DBP2	YNL112W	NSG2	P53898	299 aa		18.63	■□□□□ 0.57
DBP2	YNL112W	SSF2	Q12153	453 aa	Predicted RBP	18.63	■□□□□ 0.57
DBP2	YNL112W	ESF1	Q06344	628 aa	Known RBP	18.62	■□□□□ 0.57
DBP2	YNL112W	NPL4	P33755	580 aa		18.61	■□□□□ 0.57
DBP2	YNL112W	TIF4632	P39936	914 aa	Known RBP	18.61	■□□□□ 0.57
DBP2	YNL112W	DIP2	Q12220	943 aa	Predicted RBP	18.61	■□□□□ 0.57
DBP2	YNL112W	RPS7A	P26786	190 aa	Known RBP	18.6	■□□□□ 0.57
DBP2	YNL112W	GEF1	P37020	779 aa		18.6	■□□□□ 0.57
DBP2	YNL112W	RRP8	P38961	392 aa	Known RBP	18.6	■□□□□ 0.57
DBP2	YNL112W	CTF18	P49956	741 aa		18.6	■□□□□ 0.57
DBP2	YNL112W	ARP5	P53946	755 aa		18.6	■□□□□ 0.57
DBP2	YNL112W	ENT3	P47160	408 aa		18.59	■□□□□ 0.57
DBP2	YNL112W	RRG1	Q12167	365 aa	Predicted RBP	18.59	■□□□□ 0.57
DBP2	YNL112W	SPN1	Q06505	410 aa	Predicted RBP	18.58	■□□□□ 0.56
DBP2	YNL112W	GSC2	P40989	1895 aa		18.58	■□□□□ 0.56
DBP2	YNL112W	AFG2	P32794	780 aa		18.57	■□□□□ 0.56
DBP2	YNL112W	YHL050C	P38721	697 aa		18.57	■□□□□ 0.56
DBP2	YNL112W	SLN1	P39928	1220 aa	Predicted RBP	18.57	■□□□□ 0.56
DBP2	YNL112W	RPL19A	P0CX82	189 aa	Known RBP	18.56	■□□□□ 0.56
DBP2	YNL112W	RPL19B	P0CX83	189 aa	Predicted RBP	18.56	■□□□□ 0.56
DBP2	YNL112W	RER2	P35196	286 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	CRG1	P38892	291 aa	RIP-Chip data	18.56	■□□□□ 0.56	not detected
DBP2	YNL112W	PIP2	P52960	996 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	PUS6	P53294	404 aa		18.56	■□□□□ 0.56
DBP2	YNL112W	HDA1	P53973	706 aa		18.56	■□□□□ 0.56

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms