RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeast

Gene LIP1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LIP1	YMR298W	RIM20	Q12033	661 aa		11.25	□□□□□ -0.61
LIP1	YMR298W	ADR1	P07248	1323 aa		11.25	□□□□□ -0.61
LIP1	YMR298W	KTR1	P27810	393 aa	Known RBP	11.23	□□□□□ -0.61
LIP1	YMR298W	AAP1	P37898	856 aa	Known RBP	11.23	□□□□□ -0.61
LIP1	YMR298W	TOS1	P38288	455 aa		11.23	□□□□□ -0.61
LIP1	YMR298W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.23	□□□□□ -0.61	not detected
LIP1	YMR298W	SRS2	P12954	1174 aa		11.22	□□□□□ -0.61
LIP1	YMR298W	VPS24	P36095	224 aa	Known RBP	11.22	□□□□□ -0.61
LIP1	YMR298W	HPC2	Q01448	625 aa		11.22	□□□□□ -0.61
LIP1	YMR298W	LSP1	Q12230	341 aa	Known RBP	11.22	□□□□□ -0.61
LIP1	YMR298W	RNR2	P09938	399 aa	Known RBP	11.21	□□□□□ -0.61
LIP1	YMR298W	SSA2	P10592	639 aa	Known RBP	11.21	□□□□□ -0.61
LIP1	YMR298W	DBP1	P24784	617 aa	Known RBP	11.21	□□□□□ -0.61
LIP1	YMR298W	OSH3	P38713	996 aa	Known RBP	11.21	□□□□□ -0.61
LIP1	YMR298W	YNL193W	P53870	558 aa		11.21	□□□□□ -0.61
LIP1	YMR298W	SPP1	Q03012	353 aa		11.21	□□□□□ -0.61
LIP1	YMR298W	RPN7	Q06103	429 aa	Known RBP	11.21	□□□□□ -0.61
LIP1	YMR298W	BDF2	Q07442	638 aa		11.21	□□□□□ -0.61
LIP1	YMR298W	POM152	P39685	1337 aa		11.2	□□□□□ -0.62
LIP1	YMR298W	PIF1	P07271	859 aa		11.2	□□□□□ -0.62
LIP1	YMR298W	YBL086C	P38177	466 aa		11.2	□□□□□ -0.62
LIP1	YMR298W	STM1	P39015	273 aa	Known RBP	11.2	□□□□□ -0.62
LIP1	YMR298W	SYF1	Q04048	859 aa	Predicted RBP	11.2	□□□□□ -0.62
LIP1	YMR298W	RIX7	Q07844	837 aa	Known RBP	11.2	□□□□□ -0.62
LIP1	YMR298W	TPM1	P17536	199 aa	Known RBP	11.19	□□□□□ -0.62
LIP1	YMR298W	NGR1	P32831	672 aa	Known RBP	11.19	□□□□□ -0.62
LIP1	YMR298W	UGA2	P38067	497 aa		11.19	□□□□□ -0.62
LIP1	YMR298W	SRC1	Q03707	834 aa		11.19	□□□□□ -0.62
LIP1	YMR298W	RRI2	Q12348	645 aa		11.19	□□□□□ -0.62
LIP1	YMR298W	DPH6	Q12429	685 aa		11.19	□□□□□ -0.62
LIP1	YMR298W	DUR1,2	P32528	1835 aa	Known RBP	11.19	□□□□□ -0.62
LIP1	YMR298W	TRL1	P09880	827 aa	Known RBP	11.18	□□□□□ -0.62
LIP1	YMR298W	PBY1	P38254	753 aa		11.18	□□□□□ -0.62
LIP1	YMR298W	NUG1	P40010	520 aa	Known RBP	11.18	□□□□□ -0.62
LIP1	YMR298W	PIB2	P53191	635 aa		11.18	□□□□□ -0.62
LIP1	YMR298W	OPI1	P21957	404 aa		11.16	□□□□□ -0.62
LIP1	YMR298W	ICP55	P40051	511 aa		11.16	□□□□□ -0.62
LIP1	YMR298W	IRC3	Q06683	689 aa		11.16	□□□□□ -0.62
LIP1	YMR298W	THI3	Q07471	609 aa		11.16	□□□□□ -0.62
LIP1	YMR298W	MGM1	P32266	881 aa		11.15	□□□□□ -0.62
LIP1	YMR298W	STS1	P38637	319 aa		11.15	□□□□□ -0.62
LIP1	YMR298W	HAL5	P38970	855 aa	Known RBP	11.15	□□□□□ -0.62
LIP1	YMR298W	PFF1	P38244	976 aa		11.14	□□□□□ -0.63
LIP1	YMR298W	SNF7	P39929	240 aa	Known RBP	11.14	□□□□□ -0.63
LIP1	YMR298W	SPO22	P40511	975 aa		11.14	□□□□□ -0.63
LIP1	YMR298W	KRI1	P42846	591 aa	Known RBP	11.14	□□□□□ -0.63
LIP1	YMR298W	SIT4	P20604	311 aa		11.13	□□□□□ -0.63
LIP1	YMR298W	GLO3	P38682	493 aa	Known RBP	11.13	□□□□□ -0.63
LIP1	YMR298W	AIM9	P40053	627 aa	Known RBP	11.13	□□□□□ -0.63
LIP1	YMR298W	FRD1	P32614	470 aa	Known RBP	11.12	□□□□□ -0.63
LIP1	YMR298W	RPN1	P38764	993 aa	Known RBP	11.12	□□□□□ -0.63
LIP1	YMR298W	DJP1	P40564	432 aa		11.12	□□□□□ -0.63
LIP1	YMR298W	ENP2	P48234	707 aa	Known RBP	11.12	□□□□□ -0.63
LIP1	YMR298W	CWH41	P53008	833 aa		11.12	□□□□□ -0.63
LIP1	YMR298W	SAS4	Q04003	481 aa		11.12	□□□□□ -0.63
LIP1	YMR298W	ROX1	P25042	368 aa		11.11	□□□□□ -0.63
LIP1	YMR298W	VPS20	Q04272	221 aa		11.11	□□□□□ -0.63
LIP1	YMR298W	CLC1	P17891	233 aa		11.1	□□□□□ -0.63
LIP1	YMR298W	MSP1	P28737	362 aa		11.1	□□□□□ -0.63
LIP1	YMR298W	NPL4	P33755	580 aa		11.1	□□□□□ -0.63
LIP1	YMR298W	TIF11	P38912	153 aa	Known RBP	11.1	□□□□□ -0.63
LIP1	YMR298W	YMR147W	P40218	223 aa	Known RBP	11.1	□□□□□ -0.63
LIP1	YMR298W	NPA3	P47122	385 aa		11.1	□□□□□ -0.63
LIP1	YMR298W	GEF1	P37020	779 aa		11.09	□□□□□ -0.63
LIP1	YMR298W	PKH3	Q03306	898 aa	Predicted RBP	11.09	□□□□□ -0.63
LIP1	YMR298W	UBX2	Q04228	584 aa		11.09	□□□□□ -0.63
LIP1	YMR298W	TAH18	Q12181	623 aa		11.09	□□□□□ -0.63
LIP1	YMR298W	LAM4	P38800	1345 aa		11.09	□□□□□ -0.63
LIP1	YMR298W	PMD1	P32634	1753 aa		11.08	□□□□□ -0.64
LIP1	YMR298W	CYB2	P00175	591 aa		11.08	□□□□□ -0.64
LIP1	YMR298W	KRE2	P27809	442 aa		11.08	□□□□□ -0.64
LIP1	YMR298W	SPL2	P38839	148 aa		11.08	□□□□□ -0.64
LIP1	YMR298W	RPT4	P53549	437 aa	Known RBP	11.08	□□□□□ -0.64
LIP1	YMR298W	ERO1	Q03103	563 aa		11.08	□□□□□ -0.64
LIP1	YMR298W	FIG2	P25653	1609 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	BIK1	P11709	440 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	CAF20	P12962	161 aa	Known RBP	11.07	□□□□□ -0.64
LIP1	YMR298W	MET1	P36150	593 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	CIC1	P38779	376 aa	Known RBP	11.07	□□□□□ -0.64
LIP1	YMR298W	BDH2	P39713	417 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	KAR5	Q04746	504 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	INM2	Q05533	292 aa		11.07	□□□□□ -0.64
LIP1	YMR298W	SSF2	Q12153	453 aa	Predicted RBP	11.07	□□□□□ -0.64
LIP1	YMR298W	RPL19A	P0CX82	189 aa	Known RBP	11.06	□□□□□ -0.64
LIP1	YMR298W	RPL19B	P0CX83	189 aa	Predicted RBP	11.06	□□□□□ -0.64
LIP1	YMR298W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.06	□□□□□ -0.64	not detected
LIP1	YMR298W	YIR042C	P40586	236 aa		11.06	□□□□□ -0.64
LIP1	YMR298W	IOC3	P43596	787 aa		11.06	□□□□□ -0.64
LIP1	YMR298W	IRC8	P47046	822 aa		11.06	□□□□□ -0.64
LIP1	YMR298W	COG8	Q04632	607 aa		11.06	□□□□□ -0.64
LIP1	YMR298W	PSF3	Q12146	194 aa		11.06	□□□□□ -0.64
LIP1	YMR298W	SMY1	P32364	656 aa	Known RBP	11.05	□□□□□ -0.64
LIP1	YMR298W	ERT1	P38140	529 aa		11.05	□□□□□ -0.64
LIP1	YMR298W	MSN5	P52918	1224 aa		11.05	□□□□□ -0.64
LIP1	YMR298W	HAP5	Q02516	242 aa		11.05	□□□□□ -0.64
LIP1	YMR298W	IRC4	Q03036	179 aa		11.05	□□□□□ -0.64
LIP1	YMR298W	VMA1	P17255	1071 aa	Known RBP	11.04	□□□□□ -0.64
LIP1	YMR298W	LCB1	P25045	558 aa	Known RBP	11.04	□□□□□ -0.64
LIP1	YMR298W	PEP3	P27801	918 aa		11.04	□□□□□ -0.64
LIP1	YMR298W	YKL222C	P35995	705 aa		11.04	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms