RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C ITC1P53125 1264 aa6.26□□□□□ -1.41
VBA1YMR088C PCL8Q08966 492 aa6.26□□□□□ -1.41
VBA1YMR088C BRR1Q99177 341 aaPredicted RBP6.26□□□□□ -1.41
VBA1YMR088C PPH3P32345 308 aa6.25□□□□□ -1.41
VBA1YMR088C BIO2P32451 375 aa6.25□□□□□ -1.41
VBA1YMR088C CSE4P36012 229 aa6.25□□□□□ -1.41
VBA1YMR088C MEP1P40260 492 aa6.25□□□□□ -1.41
VBA1YMR088C ISM1P48526 1002 aa6.25□□□□□ -1.41
VBA1YMR088C GPI8P49018 411 aa6.25□□□□□ -1.41
VBA1YMR088C PXR1P53335 271 aaPredicted RBP6.25□□□□□ -1.41
VBA1YMR088C COG4Q06096 861 aa6.25□□□□□ -1.41
VBA1YMR088C ORM2Q06144 216 aa6.25□□□□□ -1.41
VBA1YMR088C UTP4Q06679 776 aaKnown RBP6.25□□□□□ -1.41
VBA1YMR088C CDC45Q08032 650 aa6.25□□□□□ -1.41
VBA1YMR088C NOP14Q99207 810 aaKnown RBP6.25□□□□□ -1.41
VBA1YMR088C DSL1P53847 754 aa6.24□□□□□ -1.41
VBA1YMR088C TIM11P81449 96 aaPredicted RBP6.24□□□□□ -1.41
VBA1YMR088C SRP1Q02821 542 aaKnown RBP6.24□□□□□ -1.41
VBA1YMR088C ELP4Q02884 456 aaKnown RBP6.24□□□□□ -1.41
VBA1YMR088C LSO1Q3E827 93 aa6.24□□□□□ -1.41
VBA1YMR088C RAM1P22007 431 aa6.23□□□□□ -1.41
VBA1YMR088C SPT5P27692 1063 aaKnown RBP6.23□□□□□ -1.41
VBA1YMR088C PUP2P32379 260 aa6.23□□□□□ -1.41
VBA1YMR088C BEM4P39011 633 aa6.23□□□□□ -1.41
VBA1YMR088C MDM1Q01846 1127 aa6.23□□□□□ -1.41
VBA1YMR088C ATG26Q06321 1198 aa6.23□□□□□ -1.41
VBA1YMR088C SSF2Q12153 453 aaPredicted RBP6.23□□□□□ -1.41
VBA1YMR088C TIF1P10081 395 aaKnown RBP6.23□□□□□ -1.41
VBA1YMR088C TRM1P15565 570 aaKnown RBP6.23□□□□□ -1.41
VBA1YMR088C MET1P36150 593 aa6.23□□□□□ -1.41
VBA1YMR088C EXO84P38261 753 aa6.23□□□□□ -1.41
VBA1YMR088C PPX1P38698 397 aa6.23□□□□□ -1.41
VBA1YMR088C ECM1P39715 212 aa6.23□□□□□ -1.41
VBA1YMR088C ENT2Q05785 613 aa6.23□□□□□ -1.41
VBA1YMR088C MRD1Q06106 887 aaKnown RBP6.23□□□□□ -1.41
VBA1YMR088C SEC23P15303 768 aaKnown RBP6.22□□□□□ -1.41
VBA1YMR088C SPT23P35210 1082 aa6.22□□□□□ -1.41
VBA1YMR088C YTA6P40328 754 aa6.22□□□□□ -1.41
VBA1YMR088C RPL34BP40525 121 aaKnown RBP6.22□□□□□ -1.41
VBA1YMR088C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
VBA1YMR088C YML119WQ03208 357 aa6.22□□□□□ -1.41
VBA1YMR088C CLP1Q08685 445 aaPredicted RBP6.22□□□□□ -1.41
VBA1YMR088C TRS33Q99394 268 aa6.22□□□□□ -1.41
VBA1YMR088C CYB2P00175 591 aa6.21□□□□□ -1.42
VBA1YMR088C BUD27P43573 796 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
VBA1YMR088C PUS6P53294 404 aa6.21□□□□□ -1.42
VBA1YMR088C TCB1Q12466 1186 aa6.21□□□□□ -1.42
VBA1YMR088C NKP1Q12493 238 aa6.21□□□□□ -1.42
VBA1YMR088C TY1A-DR4O74302 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-HP0C2I4 478 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C TY1A-AP0CX57 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-PR1P0CX58 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-ORP0CX59 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-PR2P0CX60 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-DR5P0CX65 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-ER2P0CX66 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-GR3P0CX67 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-LR1P0CX68 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-MR2P0CX69 440 aa6.2□□□□□ -1.42
VBA1YMR088C NIP100P33420 868 aa6.2□□□□□ -1.42
VBA1YMR088C EFM2P38347 419 aa6.2□□□□□ -1.42
VBA1YMR088C ETP1P38748 585 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C UBP12P39538 1254 aa6.2□□□□□ -1.42
VBA1YMR088C PTC2P39966 464 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C TY1A-JR2P47099 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-DR1Q03856 440 aa6.2□□□□□ -1.42
VBA1YMR088C PUF6Q04373 656 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C TY1A-ML1Q04706 440 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C PHM6Q05637 104 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-BRQ12217 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-NL2Q12470 440 aa6.2□□□□□ -1.42
VBA1YMR088C TY1A-GR2Q12485 440 aa6.2□□□□□ -1.42
VBA1YMR088C ERG12P07277 443 aa6.2□□□□□ -1.42
VBA1YMR088C SEC2P17065 759 aa6.2□□□□□ -1.42
VBA1YMR088C GCD11P32481 527 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C TIF3P34167 436 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C SAS3P34218 831 aa6.2□□□□□ -1.42
VBA1YMR088C COY1P34237 679 aa6.2□□□□□ -1.42
VBA1YMR088C SWD1P39706 426 aa6.2□□□□□ -1.42
VBA1YMR088C IAH1P41734 238 aa6.2□□□□□ -1.42
VBA1YMR088C YNL108CP53929 270 aa6.2□□□□□ -1.42
VBA1YMR088C DNM1P54861 757 aa6.2□□□□□ -1.42
VBA1YMR088C REX2P54964 269 aaKnown RBP6.2□□□□□ -1.42
VBA1YMR088C HEH2Q03281 663 aa6.2□□□□□ -1.42
VBA1YMR088C BUD20Q08004 166 aaPredicted RBP6.2□□□□□ -1.42
VBA1YMR088C HMI1Q12039 706 aa6.2□□□□□ -1.42
VBA1YMR088C RKM4Q12504 494 aa6.2□□□□□ -1.42
VBA1YMR088C HMG1P12683 1054 aa6.19□□□□□ -1.42
VBA1YMR088C FAR1P21268 830 aa6.19□□□□□ -1.42
VBA1YMR088C HIR2P32480 875 aa6.19□□□□□ -1.42
VBA1YMR088C PRS1P32895 427 aaKnown RBP6.19□□□□□ -1.42
VBA1YMR088C YLF2P38746 405 aa6.19□□□□□ -1.42
VBA1YMR088C SDS3P40505 327 aa6.19□□□□□ -1.42
VBA1YMR088C ALD4P46367 519 aaKnown RBP6.19□□□□□ -1.42
VBA1YMR088C AGE1Q04412 482 aa6.19□□□□□ -1.42
VBA1YMR088C YDR338CQ05497 695 aa6.19□□□□□ -1.42
VBA1YMR088C YPR015CQ12531 247 aa6.19□□□□□ -1.42
VBA1YMR088C RAD3P06839 778 aa6.18□□□□□ -1.42
VBA1YMR088C SLD2P34252 453 aa6.18□□□□□ -1.42
VBA1YMR088C PRE3P38624 215 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms