RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W ACF4P47129 309 aa8.77□□□□□ -1.01
TAF4YMR005W CUZ1P53899 274 aa8.77□□□□□ -1.01
TAF4YMR005W YMR265CQ03508 461 aaKnown RBP8.77□□□□□ -1.01
TAF4YMR005W RPP1AP05318 106 aaPredicted RBP8.76□□□□□ -1.01
TAF4YMR005W RPC31P17890 251 aa8.76□□□□□ -1.01
TAF4YMR005W RPB10P22139 70 aa8.76□□□□□ -1.01
TAF4YMR005W SPR3P41901 512 aa8.76□□□□□ -1.01
TAF4YMR005W SUT1P53032 299 aaKnown RBP8.76□□□□□ -1.01
TAF4YMR005W HXT8P40886 569 aa8.75□□□□□ -1.01
TAF4YMR005W MDJ2P42834 146 aa8.74□□□□□ -1.01
TAF4YMR005W SKP1P52286 194 aa8.74□□□□□ -1.01
TAF4YMR005W CUS1Q02554 436 aaPredicted RBP8.74□□□□□ -1.01
TAF4YMR005W KRE33P53914 1056 aaKnown RBP8.73□□□□□ -1.01
TAF4YMR005W NOP8Q08287 484 aaPredicted RBP8.73□□□□□ -1.01
TAF4YMR005W KTR2P33550 425 aa8.72□□□□□ -1.01
TAF4YMR005W SLD2P34252 453 aa8.72□□□□□ -1.01
TAF4YMR005W STM1P39015 273 aaKnown RBP8.72□□□□□ -1.01
TAF4YMR005W CEM1P39525 442 aa8.72□□□□□ -1.01
TAF4YMR005W YOR296WQ08748 1289 aa8.72□□□□□ -1.01
TAF4YMR005W MSN1P22148 382 aa8.71□□□□□ -1.02
TAF4YMR005W GIP1P38229 639 aa8.71□□□□□ -1.02
TAF4YMR005W FIR1P40020 876 aa8.71□□□□□ -1.02
TAF4YMR005W SMC1P32908 1225 aa8.7□□□□□ -1.02
TAF4YMR005W ISW1P38144 1129 aa8.7□□□□□ -1.02
TAF4YMR005W UFD2P54860 961 aa8.7□□□□□ -1.02
TAF4YMR005W YDR461C-AQ2V2P7 80 aa8.7□□□□□ -1.02
TAF4YMR005W FPS1P23900 669 aa8.69□□□□□ -1.02
TAF4YMR005W NCL1P38205 684 aaKnown RBP8.69□□□□□ -1.02
TAF4YMR005W YBR287WP38355 427 aa8.69□□□□□ -1.02
TAF4YMR005W BSD2P38356 321 aa8.69□□□□□ -1.02
TAF4YMR005W APM2P38700 605 aa8.69□□□□□ -1.02
TAF4YMR005W YHL050CP38721 697 aa8.68□□□□□ -1.02
TAF4YMR005W YHR219WP38900 624 aa8.68□□□□□ -1.02
TAF4YMR005W ADE12P80210 433 aaKnown RBP8.68□□□□□ -1.02
TAF4YMR005W TRS120Q04183 1289 aa8.68□□□□□ -1.02
TAF4YMR005W LYS5P50113 272 aa8.67□□□□□ -1.02
TAF4YMR005W SYT1Q06836 1226 aa8.67□□□□□ -1.02
TAF4YMR005W NAB2P32505 525 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02 RIP-Chip
TAF4YMR005W RAD55P38953 406 aa8.66□□□□□ -1.02
TAF4YMR005W NTA1P40354 457 aa8.66□□□□□ -1.02
TAF4YMR005W NUT2Q06213 157 aa8.66□□□□□ -1.02
TAF4YMR005W RGD2P43556 714 aa8.65□□□□□ -1.02
TAF4YMR005W SEN54Q02825 467 aaPredicted RBP8.65□□□□□ -1.02
TAF4YMR005W HEH2Q03281 663 aa8.65□□□□□ -1.02
TAF4YMR005W FRT1Q99332 602 aa8.65□□□□□ -1.02
TAF4YMR005W SEC20P28791 383 aa8.64□□□□□ -1.03
TAF4YMR005W ITC1P53125 1264 aa8.64□□□□□ -1.03
TAF4YMR005W YNR040WP53736 256 aa8.64□□□□□ -1.03
TAF4YMR005W MSC6Q08818 692 aaKnown RBP8.64□□□□□ -1.03
TAF4YMR005W MSC7P38694 644 aa8.63□□□□□ -1.03
TAF4YMR005W YGR035CP53222 116 aa8.63□□□□□ -1.03
TAF4YMR005W HPF1Q05164 967 aa8.63□□□□□ -1.03
TAF4YMR005W PPX1P38698 397 aa8.62□□□□□ -1.03
TAF4YMR005W YPL062WQ02781 134 aa8.62□□□□□ -1.03
TAF4YMR005W IRS4P36115 615 aaKnown RBP8.61□□□□□ -1.03
TAF4YMR005W JJJ3P47138 172 aa8.61□□□□□ -1.03
TAF4YMR005W DPH6Q12429 685 aa8.61□□□□□ -1.03
TAF4YMR005W TIF6Q12522 245 aaKnown RBP8.61□□□□□ -1.03
TAF4YMR005W AIM46P38885 310 aa8.6□□□□□ -1.03
TAF4YMR005W PSY2P40164 858 aa8.6□□□□□ -1.03
TAF4YMR005W TY1A-DR2Q03964 440 aaKnown RBP8.6□□□□□ -1.03
TAF4YMR005W IPL1P38991 367 aa8.59□□□□□ -1.03
TAF4YMR005W YER156CP40093 338 aaKnown RBP8.59□□□□□ -1.03
TAF4YMR005W YIL165CP40446 119 aa8.59□□□□□ -1.03
TAF4YMR005W MNL2Q12205 849 aa8.59□□□□□ -1.03
TAF4YMR005W YNL011CP53980 444 aa8.58□□□□□ -1.04
TAF4YMR005W EMG1Q06287 252 aaKnown RBP8.58□□□□□ -1.04
TAF4YMR005W IDI1P15496 288 aa8.57□□□□□ -1.04
TAF4YMR005W CDC55Q00362 526 aa8.57□□□□□ -1.04
TAF4YMR005W RSC4Q02206 625 aa8.57□□□□□ -1.04
TAF4YMR005W RSC2Q06488 889 aa8.56□□□□□ -1.04
TAF4YMR005W PRK1P40494 810 aa8.55□□□□□ -1.04
TAF4YMR005W THI12P42883 340 aa8.55□□□□□ -1.04
TAF4YMR005W THI5P43534 340 aa8.55□□□□□ -1.04
TAF4YMR005W THI11P47183 340 aa8.55□□□□□ -1.04
TAF4YMR005W THI13Q07748 340 aa8.55□□□□□ -1.04
TAF4YMR005W GPI13Q07830 1017 aa8.55□□□□□ -1.04
TAF4YMR005W WHI5Q12416 295 aa8.54□□□□□ -1.04
TAF4YMR005W GPM1P00950 247 aaKnown RBP8.53□□□□□ -1.04
TAF4YMR005W PPT1P53043 513 aa8.53□□□□□ -1.04
TAF4YMR005W BSC2Q05611 235 aa8.53□□□□□ -1.04
TAF4YMR005W HEM3P28789 327 aa8.52□□□□□ -1.05
TAF4YMR005W KNS1P32350 737 aaPredicted RBP8.52□□□□□ -1.05
TAF4YMR005W PDC5P16467 563 aaKnown RBP8.51□□□□□ -1.05
TAF4YMR005W TRK2P28584 889 aa8.5□□□□□ -1.05
TAF4YMR005W MET4P32389 672 aa8.5□□□□□ -1.05
TAF4YMR005W SAM37P50110 327 aa8.5□□□□□ -1.05
TAF4YMR005W PYC2P32327 1180 aaKnown RBP8.47□□□□□ -1.05
TAF4YMR005W GCD6P32501 712 aaKnown RBP8.47□□□□□ -1.05
TAF4YMR005W YJL181WP46987 611 aa8.47□□□□□ -1.05
TAF4YMR005W NOC3Q07896 663 aaPredicted RBP8.47□□□□□ -1.05
TAF4YMR005W MRP10O75012 95 aa8.46□□□□□ -1.06
TAF4YMR005W ECM2P38241 364 aaKnown RBP8.46□□□□□ -1.06
TAF4YMR005W CIC1P38779 376 aaKnown RBP8.46□□□□□ -1.06
TAF4YMR005W PHO4P07270 312 aaKnown RBP8.45□□□□□ -1.06
TAF4YMR005W FUS1P11710 512 aa8.45□□□□□ -1.06
TAF4YMR005W YHL008CP38750 627 aa8.45□□□□□ -1.06
TAF4YMR005W CTR9P89105 1077 aa8.45□□□□□ -1.06
TAF4YMR005W INP51P40559 946 aaKnown RBP8.44□□□□□ -1.06
TAF4YMR005W POL32P47110 350 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms