RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	LDH1	P38139	375 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	CEM1	P39525	442 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	JJJ3	P47138	172 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	LYS5	P50113	272 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	KRE33	P53914	1056 aa	Known RBP	3.22	□□□□□ -1.89
VPS34	YLR240W	CUS1	Q02554	436 aa	Predicted RBP	3.22	□□□□□ -1.89
VPS34	YLR240W	HPF1	Q05164	967 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	SYT1	Q06836	1226 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	RPB10	P22139	70 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	SSF1	P38789	453 aa	Predicted RBP	3.22	□□□□□ -1.89
VPS34	YLR240W	YOR296W	Q08748	1289 aa		3.22	□□□□□ -1.89
VPS34	YLR240W	FPS1	P23900	669 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	YGR035C	P53222	116 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	HAT1	Q12341	374 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	DPH6	Q12429	685 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	TRL1	P09880	827 aa	Known RBP	3.21	□□□□□ -1.9
VPS34	YLR240W	GLO3	P38682	493 aa	Known RBP	3.21	□□□□□ -1.9
VPS34	YLR240W	QDR1	P40475	563 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	YBL113C	Q7M4S9	792 aa		3.21	□□□□□ -1.9
VPS34	YLR240W	GIP1	P38229	639 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	BSD2	P38356	321 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	MSC7	P38694	644 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	APM2	P38700	605 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	ERP5	P38819	212 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	HXT8	P40886	569 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	ADE12	P80210	433 aa	Known RBP	3.2	□□□□□ -1.9
VPS34	YLR240W	SGS1	P35187	1447 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	MSN1	P22148	382 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	ISW1	P38144	1129 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	NCL1	P38205	684 aa	Known RBP	3.2	□□□□□ -1.9
VPS34	YLR240W	ACF4	P47129	309 aa		3.2	□□□□□ -1.9
VPS34	YLR240W	SUT1	P53032	299 aa	Known RBP	3.2	□□□□□ -1.9
VPS34	YLR240W	HEH2	Q03281	663 aa		3.19	□□□□□ -1.9
VPS34	YLR240W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
VPS34	YLR240W	GRS1	P38088	690 aa	Known RBP	3.19	□□□□□ -1.9
VPS34	YLR240W	SMC1	P32908	1225 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	NTA1	P40354	457 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	MDJ2	P42834	146 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	ITC1	P53125	1264 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	UFD2	P54860	961 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	TY1A-DR2	Q03964	440 aa	Known RBP	3.18	□□□□□ -1.9
VPS34	YLR240W	TCB3	Q03640	1545 aa	Known RBP	3.18	□□□□□ -1.9
VPS34	YLR240W	FIR1	P40020	876 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	YER156C	P40093	338 aa	Known RBP	3.18	□□□□□ -1.9
VPS34	YLR240W	RGD2	P43556	714 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	YNR040W	P53736	256 aa		3.18	□□□□□ -1.9
VPS34	YLR240W	TRS120	Q04183	1289 aa		3.17	□□□□□ -1.9
VPS34	YLR240W	SPA2	P23201	1466 aa	Known RBP	3.17	□□□□□ -1.9
VPS34	YLR240W	GPM1	P00950	247 aa	Known RBP	3.17	□□□□□ -1.9
VPS34	YLR240W	IDI1	P15496	288 aa		3.17	□□□□□ -1.9
VPS34	YLR240W	YBR287W	P38355	427 aa		3.17	□□□□□ -1.9
VPS34	YLR240W	RAD55	P38953	406 aa		3.17	□□□□□ -1.9
VPS34	YLR240W	TRK2	P28584	889 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	KNS1	P32350	737 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	STM1	P39015	273 aa	Known RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	YML020W	Q03722	664 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	NOP8	Q08287	484 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	TIF6	Q12522	245 aa	Known RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	FRT1	Q99332	602 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	PDC5	P16467	563 aa	Known RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	YIL165C	P40446	119 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	PRK1	P40494	810 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	NUT2	Q06213	157 aa		3.16	□□□□□ -1.9
VPS34	YLR240W	EMG1	Q06287	252 aa	Known RBP	3.16	□□□□□ -1.9
VPS34	YLR240W	IRS4	P36115	615 aa	Known RBP	3.15	□□□□□ -1.9
VPS34	YLR240W	YHL050C	P38721	697 aa		3.15	□□□□□ -1.9
VPS34	YLR240W	YHR219W	P38900	624 aa		3.15	□□□□□ -1.9
VPS34	YLR240W	PSY2	P40164	858 aa		3.15	□□□□□ -1.9
VPS34	YLR240W	PPX1	P38698	397 aa		3.15	□□□□□ -1.91
VPS34	YLR240W	AIM46	P38885	310 aa		3.15	□□□□□ -1.91
VPS34	YLR240W	SEN54	Q02825	467 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS34	YLR240W	RSC2	Q06488	889 aa		3.15	□□□□□ -1.91
VPS34	YLR240W	RSC4	Q02206	625 aa		3.14	□□□□□ -1.91
VPS34	YLR240W	MNL2	Q12205	849 aa		3.14	□□□□□ -1.91
VPS34	YLR240W	PPT1	P53043	513 aa		3.14	□□□□□ -1.91
VPS34	YLR240W	CDC55	Q00362	526 aa		3.14	□□□□□ -1.91
VPS34	YLR240W	SEC20	P28791	383 aa		3.13	□□□□□ -1.91
VPS34	YLR240W	MSC6	Q08818	692 aa	Known RBP	3.13	□□□□□ -1.91
VPS34	YLR240W	AI1	P03875	834 aa		3.13	□□□□□ -1.91
VPS34	YLR240W	TY1B-DR4	Q07793	1604 aa		3.13	□□□□□ -1.91
VPS34	YLR240W	SLD2	P34252	453 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	YNL011C	P53980	444 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	GPI13	Q07830	1017 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	MRP10	O75012	95 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	FUS1	P11710	512 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	BSC2	Q05611	235 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	WHI5	Q12416	295 aa		3.12	□□□□□ -1.91
VPS34	YLR240W	ALD3	P54114	506 aa		3.11	□□□□□ -1.91
VPS34	YLR240W	GIS4	Q04233	774 aa		3.11	□□□□□ -1.91
VPS34	YLR240W	NAR1	P23503	491 aa	Known RBP	3.11	□□□□□ -1.91
VPS34	YLR240W	PYC2	P32327	1180 aa	Known RBP	3.11	□□□□□ -1.91
VPS34	YLR240W	MET1	P36150	593 aa		3.11	□□□□□ -1.91
VPS34	YLR240W	IPL1	P38991	367 aa		3.11	□□□□□ -1.91
VPS34	YLR240W	INP51	P40559	946 aa	Known RBP	3.11	□□□□□ -1.91
VPS34	YLR240W	CTR9	P89105	1077 aa		3.11	□□□□□ -1.91
VPS34	YLR240W	YFL066C	P43538	392 aa		3.1	□□□□□ -1.91
VPS34	YLR240W	SLP1	Q12232	587 aa		3.1	□□□□□ -1.91
VPS34	YLR240W	COB	P00163	385 aa		3.1	□□□□□ -1.91
VPS34	YLR240W	MET4	P32389	672 aa		3.1	□□□□□ -1.91
VPS34	YLR240W	TFA2	P36145	328 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms