RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W ULP1Q02724 621 aa6.92□□□□□ -1.3
LDB18YLL049W JIP4Q03361 876 aa6.92□□□□□ -1.3
LDB18YLL049W ICP55P40051 511 aa6.91□□□□□ -1.3
LDB18YLL049W YJL171CP46992 396 aa6.91□□□□□ -1.3
LDB18YLL049W MTC3P53077 123 aa6.91□□□□□ -1.3
LDB18YLL049W PAP2P53632 584 aaKnown RBP6.91□□□□□ -1.3
LDB18YLL049W UBX2Q04228 584 aa6.9□□□□□ -1.3
LDB18YLL049W DPH6Q12429 685 aa6.9□□□□□ -1.3
LDB18YLL049W SPL2P38839 148 aa6.89□□□□□ -1.31
LDB18YLL049W SPR3P41901 512 aa6.89□□□□□ -1.31
LDB18YLL049W GSM1P42950 618 aa6.89□□□□□ -1.31
LDB18YLL049W SEN54Q02825 467 aaPredicted RBP6.89□□□□□ -1.31
LDB18YLL049W EAR1Q03212 550 aa6.89□□□□□ -1.31
LDB18YLL049W PRP42Q03776 544 aaKnown RBP6.89□□□□□ -1.31
LDB18YLL049W NIT1P40447 199 aa6.88□□□□□ -1.31
LDB18YLL049W NSE3Q05541 303 aa6.88□□□□□ -1.31
LDB18YLL049W YMR084WA2P2R3 262 aa6.87□□□□□ -1.31
LDB18YLL049W PSF2P40359 213 aa6.87□□□□□ -1.31
LDB18YLL049W RPT4P53549 437 aaKnown RBP6.87□□□□□ -1.31
LDB18YLL049W VPS64Q03944 604 aa6.87□□□□□ -1.31
LDB18YLL049W GAL2P13181 574 aa6.86□□□□□ -1.31
LDB18YLL049W ZDS2P54786 942 aa6.86□□□□□ -1.31
LDB18YLL049W TRK1P12685 1235 aa6.85□□□□□ -1.31
LDB18YLL049W YNL050CP53952 270 aa6.85□□□□□ -1.31
LDB18YLL049W LDB19Q12502 818 aa6.85□□□□□ -1.31
LDB18YLL049W FCP1Q03254 732 aa6.84□□□□□ -1.31
LDB18YLL049W TOS4Q06266 489 aa6.84□□□□□ -1.31
LDB18YLL049W PPM2Q08282 695 aa6.84□□□□□ -1.31
LDB18YLL049W FLO1P32768 1537 aa6.83□□□□□ -1.32
LDB18YLL049W ARG82P07250 355 aa6.83□□□□□ -1.32
LDB18YLL049W RPS7AP26786 190 aaKnown RBP6.83□□□□□ -1.32
LDB18YLL049W FIR1P40020 876 aa6.83□□□□□ -1.32
LDB18YLL049W ULI1P43604 169 aa6.83□□□□□ -1.32
LDB18YLL049W VPS62P53285 467 aa6.83□□□□□ -1.32
LDB18YLL049W PDS5Q04264 1277 aa6.83□□□□□ -1.32
LDB18YLL049W ECM30Q06673 1274 aa6.83□□□□□ -1.32
LDB18YLL049W GIN4Q12263 1142 aa6.83□□□□□ -1.32
LDB18YLL049W PFK2P16862 959 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
LDB18YLL049W MGM1P32266 881 aa6.82□□□□□ -1.32
LDB18YLL049W LDH1P38139 375 aa6.82□□□□□ -1.32
LDB18YLL049W PEX29Q03370 554 aa6.82□□□□□ -1.32
LDB18YLL049W IOC2Q12072 812 aa6.82□□□□□ -1.32
LDB18YLL049W LCB1P25045 558 aaKnown RBP6.81□□□□□ -1.32
LDB18YLL049W WHI3P34761 661 aaKnown RBP6.81□□□□□ -1.32
LDB18YLL049W ERG7P38604 731 aa6.81□□□□□ -1.32
LDB18YLL049W POL5P39985 1022 aaKnown RBP6.81□□□□□ -1.32
LDB18YLL049W RRP46P53256 223 aaPredicted RBP6.81□□□□□ -1.32
LDB18YLL049W ACK1Q07622 623 aaPredicted RBP6.81□□□□□ -1.32
LDB18YLL049W YDR034W-BQ6Q5X2 51 aa6.81□□□□□ -1.32
LDB18YLL049W IXR1P33417 597 aa6.8□□□□□ -1.32
LDB18YLL049W NET1P47035 1189 aa6.79□□□□□ -1.32
LDB18YLL049W IRC4Q03036 179 aa6.79□□□□□ -1.32
LDB18YLL049W PKH1Q03407 766 aa6.79□□□□□ -1.32
LDB18YLL049W THI3Q07471 609 aa6.79□□□□□ -1.32
LDB18YLL049W ADR1P07248 1323 aa6.78□□□□□ -1.32
LDB18YLL049W COQ4O13525 335 aa6.78□□□□□ -1.32
LDB18YLL049W NGR1P32831 672 aaKnown RBP6.78□□□□□ -1.32
LDB18YLL049W KEL1P38853 1164 aaKnown RBP6.78□□□□□ -1.32
LDB18YLL049W WRS1Q12109 432 aaKnown RBP6.78□□□□□ -1.32
LDB18YLL049W BMT6Q12291 365 aa6.78□□□□□ -1.32
LDB18YLL049W SAC3P46674 1301 aa6.77□□□□□ -1.32
LDB18YLL049W YJR008WP47085 338 aa6.77□□□□□ -1.33
LDB18YLL049W BMS1Q08965 1183 aaKnown RBP6.77□□□□□ -1.33
LDB18YLL049W DUR1,2P32528 1835 aaKnown RBP6.77□□□□□ -1.33
LDB18YLL049W SWI1P09547 1314 aa6.76□□□□□ -1.33
LDB18YLL049W MRM1P25270 412 aa6.76□□□□□ -1.33
LDB18YLL049W RAM2P29703 316 aa6.76□□□□□ -1.33
LDB18YLL049W TPS3P38426 1054 aaKnown RBP6.76□□□□□ -1.33
LDB18YLL049W AIM21P40563 679 aa6.76□□□□□ -1.33
LDB18YLL049W YFL040WP43562 540 aa6.76□□□□□ -1.33
LDB18YLL049W YPL034WQ03083 165 aa6.76□□□□□ -1.33
LDB18YLL049W YOL057WQ08225 711 aa6.76□□□□□ -1.33
LDB18YLL049W RAD53P22216 821 aa6.75□□□□□ -1.33
LDB18YLL049W ZDS1P50111 915 aaKnown RBP6.75□□□□□ -1.33
LDB18YLL049W ATG1P53104 897 aa6.75□□□□□ -1.33
LDB18YLL049W DNM1P54861 757 aa6.75□□□□□ -1.33
LDB18YLL049W SET1P38827 1080 aaKnown RBP6.74□□□□□ -1.33
LDB18YLL049W MAM1P40065 302 aa6.74□□□□□ -1.33
LDB18YLL049W DMA2P53924 522 aa6.74□□□□□ -1.33
LDB18YLL049W FMP30Q02883 468 aa6.74□□□□□ -1.33
LDB18YLL049W TY3A-GQ12173 290 aa6.74□□□□□ -1.33
LDB18YLL049W TY3A-IQ99219 290 aa6.74□□□□□ -1.33
LDB18YLL049W JJJ2P46997 583 aa6.73□□□□□ -1.33
LDB18YLL049W ITC1P53125 1264 aa6.73□□□□□ -1.33
LDB18YLL049W YPR148CQ06523 435 aa6.73□□□□□ -1.33
LDB18YLL049W ICL2Q12031 575 aa6.73□□□□□ -1.33
LDB18YLL049W CFT2Q12102 859 aaPredicted RBP6.73□□□□□ -1.33
LDB18YLL049W PSF3Q12146 194 aa6.73□□□□□ -1.33
LDB18YLL049W AHC1Q12433 566 aa6.73□□□□□ -1.33
LDB18YLL049W YDJ1P25491 409 aaKnown RBP6.72□□□□□ -1.33
LDB18YLL049W SPB4P25808 606 aaPredicted RBP6.72□□□□□ -1.33
LDB18YLL049W CDC60P26637 1090 aaKnown RBP6.72□□□□□ -1.33
LDB18YLL049W OCT1P35999 772 aa6.72□□□□□ -1.33
LDB18YLL049W UIP5P36137 443 aa6.72□□□□□ -1.33
LDB18YLL049W YHR131CP38835 850 aa6.72□□□□□ -1.33
LDB18YLL049W CST6P40535 587 aa6.72□□□□□ -1.33
LDB18YLL049W SRC1Q03707 834 aa6.72□□□□□ -1.33
LDB18YLL049W YDR306CQ06640 478 aa6.72□□□□□ -1.33
LDB18YLL049W TUS1Q06412 1307 aa6.72□□□□□ -1.33
LDB18YLL049W AFG3P39925 761 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms