RNA–Protein interactions for RNA: YKL188C

PXA2, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA2, Length 2,562 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA2	YKL188C	HPF1	Q05164	967 aa		3.18	□□□□□ -1.9
PXA2	YKL188C	LSO1	Q3E827	93 aa		3.18	□□□□□ -1.9
PXA2	YKL188C	FIR1	P40020	876 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	SPR3	P41901	512 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	JJJ3	P47138	172 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	CUS1	Q02554	436 aa	Predicted RBP	3.17	□□□□□ -1.9
PXA2	YKL188C	SYT1	Q06836	1226 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	GLO3	P38682	493 aa	Known RBP	3.17	□□□□□ -1.9
PXA2	YKL188C	BOL3	P39724	118 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	SKP1	P52286	194 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	ATG1	P53104	897 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	HEH2	Q03281	663 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	HAT1	Q12341	374 aa		3.17	□□□□□ -1.9
PXA2	YKL188C	SUT1	P53032	299 aa	Known RBP	3.16	□□□□□ -1.9
PXA2	YKL188C	YOR296W	Q08748	1289 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	RPC31	P17890	251 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	SMC1	P32908	1225 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	ISW1	P38144	1129 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	GIP1	P38229	639 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	HXT8	P40886	569 aa		3.16	□□□□□ -1.9
PXA2	YKL188C	APM2	P38700	605 aa		3.15	□□□□□ -1.9
PXA2	YKL188C	APC11	Q12157	165 aa		3.15	□□□□□ -1.9
PXA2	YKL188C	YBL113C	Q7M4S9	792 aa		3.15	□□□□□ -1.9
PXA2	YKL188C	TRK2	P28584	889 aa		3.15	□□□□□ -1.91
PXA2	YKL188C	BOI1	P38041	980 aa	Known RBP	3.15	□□□□□ -1.91
PXA2	YKL188C	GRS1	P38088	690 aa	Known RBP	3.15	□□□□□ -1.91
PXA2	YKL188C	QDR1	P40475	563 aa		3.15	□□□□□ -1.91
PXA2	YKL188C	RPB10	P22139	70 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	ACF4	P47129	309 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	UFD2	P54860	961 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	MSN1	P22148	382 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	BSD2	P38356	321 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	TY1A-DR2	Q03964	440 aa	Known RBP	3.14	□□□□□ -1.91
PXA2	YKL188C	RSC2	Q06488	889 aa		3.14	□□□□□ -1.91
PXA2	YKL188C	SSF1	P38789	453 aa	Predicted RBP	3.13	□□□□□ -1.91
PXA2	YKL188C	ERP5	P38819	212 aa		3.13	□□□□□ -1.91
PXA2	YKL188C	RAD55	P38953	406 aa		3.13	□□□□□ -1.91
PXA2	YKL188C	GPM1	P00950	247 aa	Known RBP	3.13	□□□□□ -1.91
PXA2	YKL188C	AI1	P03875	834 aa		3.13	□□□□□ -1.91
PXA2	YKL188C	KNS1	P32350	737 aa	Predicted RBP	3.12	□□□□□ -1.91
PXA2	YKL188C	MSC7	P38694	644 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	AIM46	P38885	310 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	NTA1	P40354	457 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	PDC5	P16467	563 aa	Known RBP	3.12	□□□□□ -1.91
PXA2	YKL188C	MET1	P36150	593 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	STM1	P39015	273 aa	Known RBP	3.12	□□□□□ -1.91
PXA2	YKL188C	YER156C	P40093	338 aa	Known RBP	3.12	□□□□□ -1.91
PXA2	YKL188C	ITC1	P53125	1264 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	YNR040W	P53736	256 aa		3.12	□□□□□ -1.91
PXA2	YKL188C	SLD2	P34252	453 aa		3.11	□□□□□ -1.91
PXA2	YKL188C	IRS4	P36115	615 aa	Known RBP	3.11	□□□□□ -1.91
PXA2	YKL188C	TRS120	Q04183	1289 aa		3.11	□□□□□ -1.91
PXA2	YKL188C	IDI1	P15496	288 aa		3.11	□□□□□ -1.91
PXA2	YKL188C	PRK1	P40494	810 aa		3.11	□□□□□ -1.91
PXA2	YKL188C	TRL1	P09880	827 aa	Known RBP	3.1	□□□□□ -1.91
PXA2	YKL188C	PSY2	P40164	858 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	YIL165C	P40446	119 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	PPT1	P53043	513 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
PXA2	YKL188C	KTR2	P33550	425 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	RGD2	P43556	714 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	YNR014W	P53719	212 aa		3.1	□□□□□ -1.91
PXA2	YKL188C	SEC20	P28791	383 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	MDJ2	P42834	146 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	NSG2	P53898	299 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	TIF6	Q12522	245 aa	Known RBP	3.09	□□□□□ -1.91
PXA2	YKL188C	ECM2	P38241	364 aa	Known RBP	3.09	□□□□□ -1.91
PXA2	YKL188C	YHL050C	P38721	697 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	YHR219W	P38900	624 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	NUT2	Q06213	157 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	EMG1	Q06287	252 aa	Known RBP	3.09	□□□□□ -1.91
PXA2	YKL188C	PHM7	Q12252	991 aa		3.09	□□□□□ -1.91
PXA2	YKL188C	ALG14	P38242	237 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	BOI2	P39969	1040 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	YJL181W	P46987	611 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	YML020W	Q03722	664 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	THI72	Q08579	599 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	YNL011C	P53980	444 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	NHA1	Q99271	985 aa		3.08	□□□□□ -1.92
PXA2	YKL188C	CDC55	Q00362	526 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	PUS1	Q12211	544 aa	Known RBP	3.07	□□□□□ -1.92
PXA2	YKL188C	FUS1	P11710	512 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	PPX1	P38698	397 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	RSC4	Q02206	625 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	BSC2	Q05611	235 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	SLP1	Q12232	587 aa		3.07	□□□□□ -1.92
PXA2	YKL188C	PGM2	P37012	569 aa	Known RBP	3.06	□□□□□ -1.92
PXA2	YKL188C	THI12	P42883	340 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	THI5	P43534	340 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	THI11	P47183	340 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	SAM37	P50110	327 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	GIS4	Q04233	774 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	THI13	Q07748	340 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	MSC6	Q08818	692 aa	Known RBP	3.06	□□□□□ -1.92
PXA2	YKL188C	FRT1	Q99332	602 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	YHL008C	P38750	627 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	CIC1	P38779	376 aa	Known RBP	3.06	□□□□□ -1.92
PXA2	YKL188C	ICP55	P40051	511 aa		3.06	□□□□□ -1.92
PXA2	YKL188C	SBE2	P42223	864 aa	Known RBP	3.06	□□□□□ -1.92
PXA2	YKL188C	NAR1	P23503	491 aa	Known RBP	3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms