RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
NUP82	YJL061W	SMC1	P32908	1225 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	YHL050C	P38721	697 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	YHR219W	P38900	624 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	ROG3	P43602	733 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	UFD2	P54860	961 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	NAM8	Q00539	523 aa	Known RBP	3.82	□□□□□ -1.8
NUP82	YJL061W	TY1A-MR1	Q04215	440 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	ACO2	P39533	789 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	FIR1	P40020	876 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	SEN54	Q02825	467 aa	Predicted RBP	3.82	□□□□□ -1.8
NUP82	YJL061W	STB3	Q12427	513 aa		3.82	□□□□□ -1.8
NUP82	YJL061W	RPC31	P17890	251 aa		3.81	□□□□□ -1.8
NUP82	YJL061W	MRPL16	P38064	232 aa		3.81	□□□□□ -1.8
NUP82	YJL061W	TRS120	Q04183	1289 aa		3.81	□□□□□ -1.8
NUP82	YJL061W	YOR296W	Q08748	1289 aa		3.81	□□□□□ -1.8
NUP82	YJL061W	MSC6	Q08818	692 aa	Known RBP	3.81	□□□□□ -1.8
NUP82	YJL061W	ISW1	P38144	1129 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	GIP1	P38229	639 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	PPX1	P38698	397 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	SKP1	P52286	194 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	CAF120	P53836	1060 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	CUS1	Q02554	436 aa	Predicted RBP	3.8	□□□□□ -1.8
NUP82	YJL061W	YMR265C	Q03508	461 aa	Known RBP	3.8	□□□□□ -1.8
NUP82	YJL061W	NUT2	Q06213	157 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	DIT1	P21623	536 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	MSN1	P22148	382 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	YIR007W	P40566	764 aa		3.8	□□□□□ -1.8
NUP82	YJL061W	KTR2	P33550	425 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	NCL1	P38205	684 aa	Known RBP	3.79	□□□□□ -1.8
NUP82	YJL061W	RAD55	P38953	406 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	CUZ1	P53899	274 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	HEM3	P28789	327 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	APM2	P38700	605 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	NTA1	P40354	457 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	FRT1	Q99332	602 aa		3.79	□□□□□ -1.8
NUP82	YJL061W	CCP1	P00431	361 aa		3.78	□□□□□ -1.8
NUP82	YJL061W	BSD2	P38356	321 aa		3.78	□□□□□ -1.8
NUP82	YJL061W	IPL1	P38991	367 aa		3.78	□□□□□ -1.8
NUP82	YJL061W	CEM1	P39525	442 aa		3.78	□□□□□ -1.8
NUP82	YJL061W	KRE33	P53914	1056 aa	Known RBP	3.78	□□□□□ -1.8
NUP82	YJL061W	FPS1	P23900	669 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	THI12	P42883	340 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	THI5	P43534	340 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	THI11	P47183	340 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	HEH2	Q03281	663 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	THI13	Q07748	340 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	YDR461C-A	Q2V2P7	80 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	IRS4	P36115	615 aa	Known RBP	3.77	□□□□□ -1.81
NUP82	YJL061W	RGD2	P43556	714 aa		3.77	□□□□□ -1.81
NUP82	YJL061W	ASF1	P32447	279 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	AIM46	P38885	310 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	PSY2	P40164	858 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	YNL011C	P53980	444 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	ADE12	P80210	433 aa	Known RBP	3.76	□□□□□ -1.81
NUP82	YJL061W	CDC55	Q00362	526 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	YDL176W	Q12027	708 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	LYS5	P50113	272 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	ITC1	P53125	1264 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	RSC4	Q02206	625 aa		3.76	□□□□□ -1.81
NUP82	YJL061W	TIF6	Q12522	245 aa	Known RBP	3.76	□□□□□ -1.81
NUP82	YJL061W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
NUP82	YJL061W	YNR040W	P53736	256 aa		3.75	□□□□□ -1.81
NUP82	YJL061W	RGA2	Q06407	1009 aa		3.75	□□□□□ -1.81
NUP82	YJL061W	RSC2	Q06488	889 aa		3.75	□□□□□ -1.81
NUP82	YJL061W	SYT1	Q06836	1226 aa		3.75	□□□□□ -1.81
NUP82	YJL061W	MNL2	Q12205	849 aa		3.75	□□□□□ -1.81
NUP82	YJL061W	YER156C	P40093	338 aa	Known RBP	3.74	□□□□□ -1.81
NUP82	YJL061W	YIL165C	P40446	119 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	SAM37	P50110	327 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	WHI5	Q12416	295 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	GCD6	P32501	712 aa	Known RBP	3.74	□□□□□ -1.81
NUP82	YJL061W	MSC7	P38694	644 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	BSC2	Q05611	235 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	EMG1	Q06287	252 aa	Known RBP	3.74	□□□□□ -1.81
NUP82	YJL061W	GPI13	Q07830	1017 aa		3.74	□□□□□ -1.81
NUP82	YJL061W	MET4	P32389	672 aa		3.73	□□□□□ -1.81
NUP82	YJL061W	TY1A-DR2	Q03964	440 aa	Known RBP	3.73	□□□□□ -1.81
NUP82	YJL061W	DPH6	Q12429	685 aa		3.73	□□□□□ -1.81
NUP82	YJL061W	IDI1	P15496	288 aa		3.73	□□□□□ -1.81
NUP82	YJL061W	CIC1	P38779	376 aa	Known RBP	3.73	□□□□□ -1.81
NUP82	YJL061W	POL32	P47110	350 aa		3.73	□□□□□ -1.81
NUP82	YJL061W	YGR035C	P53222	116 aa		3.73	□□□□□ -1.81
NUP82	YJL061W	NOC3	Q07896	663 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP82	YJL061W	ECM2	P38241	364 aa	Known RBP	3.72	□□□□□ -1.81
NUP82	YJL061W	MGE1	P38523	228 aa		3.72	□□□□□ -1.81
NUP82	YJL061W	JJJ3	P47138	172 aa		3.72	□□□□□ -1.81
NUP82	YJL061W	PPT1	P53043	513 aa		3.72	□□□□□ -1.81
NUP82	YJL061W	PHO4	P07270	312 aa	Known RBP	3.71	□□□□□ -1.81
NUP82	YJL061W	VPS35	P34110	944 aa		3.71	□□□□□ -1.81
NUP82	YJL061W	PRK1	P40494	810 aa		3.71	□□□□□ -1.81
NUP82	YJL061W	HPF1	Q05164	967 aa		3.71	□□□□□ -1.81
NUP82	YJL061W	YHL008C	P38750	627 aa		3.71	□□□□□ -1.82
NUP82	YJL061W	OXR1	Q08952	273 aa		3.7	□□□□□ -1.82
NUP82	YJL061W	GPM1	P00950	247 aa	Known RBP	3.7	□□□□□ -1.82
NUP82	YJL061W	FLP1	P03870	423 aa		3.7	□□□□□ -1.82
NUP82	YJL061W	PYC2	P32327	1180 aa	Known RBP	3.7	□□□□□ -1.82
NUP82	YJL061W	KNS1	P32350	737 aa	Predicted RBP	3.7	□□□□□ -1.82
NUP82	YJL061W	INP54	Q08227	384 aa	Known RBP	3.7	□□□□□ -1.82
NUP82	YJL061W	FUS1	P11710	512 aa		3.69	□□□□□ -1.82

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