RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RPN4Q03465 531 aa3.11□□□□□ -1.91
PRP8YHR165C RCF1Q03713 159 aa3.11□□□□□ -1.91
PRP8YHR165C UIP5P36137 443 aa3.11□□□□□ -1.91
PRP8YHR165C SPT8P38915 602 aa3.11□□□□□ -1.91
PRP8YHR165C INA22P40576 216 aa3.11□□□□□ -1.91
PRP8YHR165C STI1P15705 589 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91 RIP-Chip
PRP8YHR165C SSA4P22202 642 aaKnown RBP3.11□□□□□ -1.91
PRP8YHR165C HSE1P38753 452 aa3.11□□□□□ -1.91
PRP8YHR165C MTW1P39731 289 aa3.11□□□□□ -1.91
PRP8YHR165C SMC3P47037 1230 aa3.11□□□□□ -1.91
PRP8YHR165C DBP10Q12389 995 aaKnown RBP3.11□□□□□ -1.91
PRP8YHR165C GEF1P37020 779 aa3.1□□□□□ -1.91
PRP8YHR165C SGM1P47166 707 aa3.1□□□□□ -1.91
PRP8YHR165C DUS1P53759 423 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C SWC5P38326 303 aa3.1□□□□□ -1.91
PRP8YHR165C FPK1P53739 893 aa3.1□□□□□ -1.91
PRP8YHR165C PRP2P20095 876 aaPredicted RBP3.1□□□□□ -1.91
PRP8YHR165C SSF1P38789 453 aaPredicted RBP3.1□□□□□ -1.91
PRP8YHR165C YML6P51998 286 aa3.1□□□□□ -1.91
PRP8YHR165C ITC1P53125 1264 aa3.1□□□□□ -1.91
PRP8YHR165C PIN2Q12057 282 aa3.1□□□□□ -1.91
PRP8YHR165C SPB1P25582 841 aaPredicted RBP3.1□□□□□ -1.91
PRP8YHR165C PIM1P36775 1133 aa3.1□□□□□ -1.91
PRP8YHR165C RSF2P46974 1380 aa3.1□□□□□ -1.91
PRP8YHR165C GAP1P19145 602 aaPredicted RBP3.1□□□□□ -1.91
PRP8YHR165C YKL100CP34248 587 aa3.1□□□□□ -1.91
PRP8YHR165C SIP3P38717 1229 aa3.1□□□□□ -1.91
PRP8YHR165C ETP1P38748 585 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C RAD26P40352 1085 aa3.1□□□□□ -1.91
PRP8YHR165C VMA13P41807 478 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C SGD1Q06132 899 aa3.1□□□□□ -1.91
PRP8YHR165C PRP4P20053 465 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C STO1P34160 861 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C EXO84P38261 753 aa3.1□□□□□ -1.91
PRP8YHR165C UTP9P38882 575 aaKnown RBP3.1□□□□□ -1.91
PRP8YHR165C YJR107WP47145 328 aa3.1□□□□□ -1.91
PRP8YHR165C TAP42Q04372 366 aa3.1□□□□□ -1.91
PRP8YHR165C PKC1P24583 1151 aa3.09□□□□□ -1.91
PRP8YHR165C LAM5P43560 674 aa3.09□□□□□ -1.91
PRP8YHR165C TAF8Q03750 510 aa3.09□□□□□ -1.91
PRP8YHR165C UTP5Q04177 643 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C SES1P07284 462 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C YEL1P34225 687 aa3.09□□□□□ -1.91
PRP8YHR165C SAP4P53036 818 aa3.09□□□□□ -1.91
PRP8YHR165C UBP10P53874 792 aaPredicted RBP3.09□□□□□ -1.91
PRP8YHR165C DBP9Q06218 594 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C ZUO1P32527 433 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C ELM1P32801 640 aa3.09□□□□□ -1.91
PRP8YHR165C OTU2P38747 307 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C BFR1P38934 470 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91 RIP-Chip
PRP8YHR165C YNL011CP53980 444 aa3.09□□□□□ -1.91
PRP8YHR165C APL5Q08951 932 aaKnown RBP3.09□□□□□ -1.91
PRP8YHR165C DRS2P39524 1355 aa3.09□□□□□ -1.91
PRP8YHR165C NUG1P40010 520 aaKnown RBP3.09□□□□□ -1.92
PRP8YHR165C BBC1P47068 1157 aa3.09□□□□□ -1.92
PRP8YHR165C YNL058CP53947 316 aa3.09□□□□□ -1.92
PRP8YHR165C HAP5Q02516 242 aa3.09□□□□□ -1.92
PRP8YHR165C BYE1P36106 594 aa3.08□□□□□ -1.92
PRP8YHR165C TPM2P40414 161 aa3.08□□□□□ -1.92
PRP8YHR165C TFG1P41895 735 aaPredicted RBP3.08□□□□□ -1.92
PRP8YHR165C YFL066CP43538 392 aa3.08□□□□□ -1.92
PRP8YHR165C RSA3Q05942 220 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C RPN7Q06103 429 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C NOB1Q08444 459 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C NOP14Q99207 810 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C TOM70P07213 617 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C CBF2P32504 956 aa3.08□□□□□ -1.92
PRP8YHR165C CGR1P53188 120 aa3.08□□□□□ -1.92
PRP8YHR165C MAM3Q12296 706 aa3.08□□□□□ -1.92
PRP8YHR165C SPS1P08458 490 aa3.08□□□□□ -1.92
PRP8YHR165C SIR1P21691 654 aa3.08□□□□□ -1.92
PRP8YHR165C SPT16P32558 1035 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C ALA1P40825 983 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C APL6P46682 809 aa3.08□□□□□ -1.92
PRP8YHR165C HGH1P48362 394 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C PRP43P53131 767 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C DPB4Q04603 196 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C UBX5Q06682 500 aa3.08□□□□□ -1.92
PRP8YHR165C CLC1P17891 233 aa3.08□□□□□ -1.92
PRP8YHR165C RSP5P39940 809 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C CDC40P40968 455 aaPredicted RBP3.08□□□□□ -1.92
PRP8YHR165C RMR1P53060 241 aa3.08□□□□□ -1.92
PRP8YHR165C BDF2Q07442 638 aa3.08□□□□□ -1.92
PRP8YHR165C PSK1P31374 1356 aa3.08□□□□□ -1.92
PRP8YHR165C CDC48P25694 835 aaKnown RBP3.08□□□□□ -1.92
PRP8YHR165C ULP1Q02724 621 aa3.08□□□□□ -1.92
PRP8YHR165C RBA50Q04418 439 aa3.08□□□□□ -1.92
PRP8YHR165C HDA3Q06623 655 aa3.08□□□□□ -1.92
PRP8YHR165C PSR1Q07800 427 aa3.08□□□□□ -1.92
PRP8YHR165C HIF1Q12373 385 aa3.08□□□□□ -1.92
PRP8YHR165C BRR1Q99177 341 aaPredicted RBP3.08□□□□□ -1.92
PRP8YHR165C APM4Q99186 491 aa3.08□□□□□ -1.92
PRP8YHR165C SAC3P46674 1301 aa3.08□□□□□ -1.92
PRP8YHR165C MSH2P25847 964 aa3.08□□□□□ -1.92
PRP8YHR165C SPC42P36094 363 aa3.08□□□□□ -1.92
PRP8YHR165C YHR054CP38780 354 aa3.08□□□□□ -1.92
PRP8YHR165C FKH1P40466 484 aa3.08□□□□□ -1.92
PRP8YHR165C TIM11P81449 96 aaPredicted RBP3.08□□□□□ -1.92
PRP8YHR165C KRE5P22023 1365 aa3.07□□□□□ -1.92
PRP8YHR165C CLB1P24868 471 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms