RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W KTR7P40504 517 aa4.52□□□□□ -1.69
BCD1YHR040W APL6P46682 809 aa4.52□□□□□ -1.69
BCD1YHR040W DFG5Q05031 458 aa4.52□□□□□ -1.69
BCD1YHR040W BDS1Q08347 646 aa4.52□□□□□ -1.69
BCD1YHR040W DNF2Q12675 1612 aa4.52□□□□□ -1.69
BCD1YHR040W PDR5P33302 1511 aaKnown RBP4.51□□□□□ -1.69
BCD1YHR040W RDS2P19541 446 aaKnown RBP4.51□□□□□ -1.69
BCD1YHR040W CPS1P27614 576 aa4.51□□□□□ -1.69
BCD1YHR040W TTI1P36097 1038 aa4.51□□□□□ -1.69
BCD1YHR040W BRE2P43132 505 aa4.51□□□□□ -1.69
BCD1YHR040W ISU1Q03020 165 aa4.51□□□□□ -1.69
BCD1YHR040W ARG82P07250 355 aa4.5□□□□□ -1.69
BCD1YHR040W DAT1P13483 248 aaKnown RBP4.5□□□□□ -1.69
BCD1YHR040W CDC3P32457 520 aaKnown RBP4.5□□□□□ -1.69
BCD1YHR040W YJR115WP47152 169 aa4.5□□□□□ -1.69
BCD1YHR040W MIP1P15801 1254 aa4.49□□□□□ -1.69
BCD1YHR040W UTR2P32623 467 aa4.49□□□□□ -1.69
BCD1YHR040W TBS1P38114 1094 aa4.49□□□□□ -1.69
BCD1YHR040W SSF1P38789 453 aaPredicted RBP4.49□□□□□ -1.69
BCD1YHR040W DLD3P39976 496 aaKnown RBP4.49□□□□□ -1.69
BCD1YHR040W PTK2P47116 818 aaKnown RBP4.49□□□□□ -1.69
BCD1YHR040W RPL34AP87262 121 aaPredicted RBP4.49□□□□□ -1.69
BCD1YHR040W RAV1P47104 1357 aa4.49□□□□□ -1.69
BCD1YHR040W RTC1Q08281 1341 aa4.48□□□□□ -1.69
BCD1YHR040W STE6P12866 1290 aa4.48□□□□□ -1.69
BCD1YHR040W HEM3P28789 327 aa4.48□□□□□ -1.69
BCD1YHR040W PEP12P32854 288 aa4.48□□□□□ -1.69
BCD1YHR040W ESL2P36168 1195 aa4.48□□□□□ -1.69
BCD1YHR040W PAM1P37304 830 aaKnown RBP4.48□□□□□ -1.69
BCD1YHR040W HAL5P38970 855 aaKnown RBP4.48□□□□□ -1.69
BCD1YHR040W YFL034WP43564 1073 aa4.48□□□□□ -1.69
BCD1YHR040W HDA3Q06623 655 aa4.48□□□□□ -1.69
BCD1YHR040W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
BCD1YHR040W MHP1P43638 1398 aa4.48□□□□□ -1.69
BCD1YHR040W TGL4P36165 910 aa4.47□□□□□ -1.69
BCD1YHR040W AAD14P42884 376 aa4.47□□□□□ -1.69
BCD1YHR040W YRF1-1P0CX20 1796 aa4.47□□□□□ -1.69
BCD1YHR040W YRF1-5P0CX21 1796 aa4.47□□□□□ -1.69
BCD1YHR040W YRF1-8P0CX22 1796 aa4.47□□□□□ -1.69
BCD1YHR040W SPT2P06843 333 aaPredicted RBP4.46□□□□□ -1.7
BCD1YHR040W PDI1P17967 522 aaKnown RBP4.46□□□□□ -1.7
BCD1YHR040W AIM9P40053 627 aaKnown RBP4.46□□□□□ -1.7
BCD1YHR040W ECM23Q02710 187 aa4.46□□□□□ -1.7
BCD1YHR040W SEN54Q02825 467 aaPredicted RBP4.46□□□□□ -1.7
BCD1YHR040W GAL2P13181 574 aa4.45□□□□□ -1.7
BCD1YHR040W HAP4P14064 554 aa4.45□□□□□ -1.7
BCD1YHR040W PHO87P25360 923 aa4.45□□□□□ -1.7
BCD1YHR040W RRN6P32786 894 aa4.45□□□□□ -1.7
BCD1YHR040W NUP85P46673 744 aa4.45□□□□□ -1.7
BCD1YHR040W NOB1Q08444 459 aaKnown RBP4.45□□□□□ -1.7
BCD1YHR040W TSC13Q99190 310 aa4.45□□□□□ -1.7
BCD1YHR040W LSC2P53312 427 aa4.44□□□□□ -1.7
BCD1YHR040W YLR346CQ06139 101 aa4.44□□□□□ -1.7
BCD1YHR040W WTM2Q12206 467 aa4.44□□□□□ -1.7
BCD1YHR040W DOP1Q03921 1698 aa4.44□□□□□ -1.7
BCD1YHR040W PUP1P25043 261 aa4.43□□□□□ -1.7
BCD1YHR040W ASF1P32447 279 aa4.43□□□□□ -1.7
BCD1YHR040W DLD1P32891 587 aa4.43□□□□□ -1.7
BCD1YHR040W NTH2P35172 780 aa4.43□□□□□ -1.7
BCD1YHR040W ACS2P52910 683 aaKnown RBP4.43□□□□□ -1.7
BCD1YHR040W YPL062WQ02781 134 aa4.43□□□□□ -1.7
BCD1YHR040W SEC7P11075 2009 aaKnown RBP4.43□□□□□ -1.7
BCD1YHR040W TY3B-IQ7LHG5 1498 aaKnown RBP4.43□□□□□ -1.7
BCD1YHR040W UBX7P38349 436 aa4.42□□□□□ -1.7
BCD1YHR040W UTP7P40055 554 aaKnown RBP4.42□□□□□ -1.7
BCD1YHR040W ALA1P40825 983 aaKnown RBP4.42□□□□□ -1.7
BCD1YHR040W NOP2P40991 618 aaKnown RBP4.42□□□□□ -1.7
BCD1YHR040W SPT7P35177 1332 aa4.42□□□□□ -1.7
BCD1YHR040W CHC1P22137 1653 aaKnown RBP4.41□□□□□ -1.7
BCD1YHR040W IML1P47170 1584 aa4.41□□□□□ -1.7
BCD1YHR040W SWI5P08153 709 aa4.41□□□□□ -1.7
BCD1YHR040W RPS6AP0CX37 236 aaKnown RBP4.41□□□□□ -1.7
BCD1YHR040W RPS6BP0CX38 236 aaPredicted RBP4.41□□□□□ -1.7
BCD1YHR040W TAF5P38129 798 aa4.41□□□□□ -1.7
BCD1YHR040W IPL1P38991 367 aa4.41□□□□□ -1.7
BCD1YHR040W GAS4Q08271 471 aa4.41□□□□□ -1.7
BCD1YHR040W MET22P32179 357 aa4.4□□□□□ -1.71
BCD1YHR040W SUM1P46676 1062 aa4.4□□□□□ -1.71
BCD1YHR040W YJR098CP47139 656 aa4.4□□□□□ -1.71
BCD1YHR040W KIP3P53086 805 aaKnown RBP4.4□□□□□ -1.71
BCD1YHR040W UBP2Q01476 1272 aa4.4□□□□□ -1.71
BCD1YHR040W YDR444WQ04093 687 aa4.4□□□□□ -1.71
BCD1YHR040W PDS5Q04264 1277 aa4.4□□□□□ -1.71
BCD1YHR040W YML083CQ04526 418 aa4.4□□□□□ -1.71
BCD1YHR040W OPT2Q06593 877 aa4.4□□□□□ -1.71
BCD1YHR040W HAT1Q12341 374 aa4.4□□□□□ -1.71
BCD1YHR040W HAP1P0CE41 1502 aa4.4□□□□□ -1.71
BCD1YHR040W VMR1P38735 1592 aa4.4□□□□□ -1.71
BCD1YHR040W NUP188P52593 1655 aaKnown RBP4.39□□□□□ -1.71
BCD1YHR040W CYT1P07143 309 aa4.39□□□□□ -1.71
BCD1YHR040W VAN1P23642 535 aa4.39□□□□□ -1.71
BCD1YHR040W GBP2P25555 427 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
BCD1YHR040W GAR1P28007 205 aaKnown RBP4.39□□□□□ -1.71
BCD1YHR040W YAP3P38749 330 aa4.39□□□□□ -1.71
BCD1YHR040W STM1P39015 273 aaKnown RBP4.39□□□□□ -1.71
BCD1YHR040W ROM1P53046 1155 aa4.39□□□□□ -1.71
BCD1YHR040W TCB1Q12466 1186 aa4.39□□□□□ -1.71
BCD1YHR040W YLR419WQ06698 1435 aaKnown RBP4.38□□□□□ -1.71
BCD1YHR040W SEC20P28791 383 aa4.38□□□□□ -1.71
BCD1YHR040W CWH41P53008 833 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms