RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ASF1P32447 279 aa6.06□□□□□ -1.44
PRP18YGR006W KAP122P32767 1081 aa6.06□□□□□ -1.44
PRP18YGR006W SMC1P32908 1225 aa6.06□□□□□ -1.44
PRP18YGR006W OSH7P38755 437 aa6.06□□□□□ -1.44
PRP18YGR006W QDR2P40474 542 aa6.06□□□□□ -1.44
PRP18YGR006W YIR007WP40566 764 aa6.06□□□□□ -1.44
PRP18YGR006W HXT8P40886 569 aa6.06□□□□□ -1.44
PRP18YGR006W SUT1P53032 299 aaKnown RBP6.06□□□□□ -1.44
PRP18YGR006W YBR287WP38355 427 aa6.05□□□□□ -1.44
PRP18YGR006W YPL062WQ02781 134 aa6.05□□□□□ -1.44
PRP18YGR006W PSH1Q12161 406 aa6.05□□□□□ -1.44
PRP18YGR006W FRT1Q99332 602 aa6.05□□□□□ -1.44
PRP18YGR006W CDC19P00549 500 aaKnown RBP6.04□□□□□ -1.44
PRP18YGR006W LEU1P07264 779 aaKnown RBP6.04□□□□□ -1.44
PRP18YGR006W ACO2P39533 789 aa6.04□□□□□ -1.44
PRP18YGR006W FIR1P40020 876 aa6.04□□□□□ -1.44
PRP18YGR006W ROG3P43602 733 aa6.04□□□□□ -1.44
PRP18YGR006W MTO1P53070 669 aa6.04□□□□□ -1.44
PRP18YGR006W THI12P42883 340 aa6.03□□□□□ -1.44
PRP18YGR006W THI5P43534 340 aa6.03□□□□□ -1.44
PRP18YGR006W THI11P47183 340 aa6.03□□□□□ -1.44
PRP18YGR006W THI13Q07748 340 aa6.03□□□□□ -1.44
PRP18YGR006W RPP1AP05318 106 aaPredicted RBP6.02□□□□□ -1.45
PRP18YGR006W KTR2P33550 425 aa6.02□□□□□ -1.45
PRP18YGR006W ALD2P47771 506 aa6.02□□□□□ -1.45
PRP18YGR006W RPC31P17890 251 aa6.01□□□□□ -1.45
PRP18YGR006W MSN1P22148 382 aa6.01□□□□□ -1.45
PRP18YGR006W ISW1P38144 1129 aa6.01□□□□□ -1.45
PRP18YGR006W GIP1P38229 639 aa6.01□□□□□ -1.45
PRP18YGR006W WHI5Q12416 295 aa6.01□□□□□ -1.45
PRP18YGR006W RGP1P16664 663 aa6□□□□□ -1.45
PRP18YGR006W RAD55P38953 406 aa6□□□□□ -1.45
PRP18YGR006W NTA1P40354 457 aa6□□□□□ -1.45
PRP18YGR006W SKP1P52286 194 aa6□□□□□ -1.45
PRP18YGR006W NAM8Q00539 523 aaKnown RBP6□□□□□ -1.45
PRP18YGR006W TY1A-MR1Q04215 440 aa6□□□□□ -1.45
PRP18YGR006W YOR296WQ08748 1289 aa6□□□□□ -1.45
PRP18YGR006W POL32P47110 350 aa5.99□□□□□ -1.45
PRP18YGR006W YNL011CP53980 444 aa5.99□□□□□ -1.45
PRP18YGR006W CDC55Q00362 526 aa5.99□□□□□ -1.45
PRP18YGR006W MNL2Q12205 849 aa5.99□□□□□ -1.45
PRP18YGR006W MET4P32389 672 aa5.98□□□□□ -1.45
PRP18YGR006W SNU71P53207 620 aaKnown RBP5.98□□□□□ -1.45
PRP18YGR006W RSC4Q02206 625 aa5.98□□□□□ -1.45
PRP18YGR006W CUS1Q02554 436 aaPredicted RBP5.98□□□□□ -1.45
PRP18YGR006W GCD6P32501 712 aaKnown RBP5.97□□□□□ -1.45
PRP18YGR006W IRS4P36115 615 aaKnown RBP5.97□□□□□ -1.45
PRP18YGR006W MRPL16P38064 232 aa5.97□□□□□ -1.45
PRP18YGR006W MGE1P38523 228 aa5.97□□□□□ -1.45
PRP18YGR006W RGD2P43556 714 aa5.97□□□□□ -1.45
PRP18YGR006W GPI13Q07830 1017 aa5.97□□□□□ -1.45
PRP18YGR006W STB3Q12427 513 aa5.97□□□□□ -1.45
PRP18YGR006W CCP1P00431 361 aa5.96□□□□□ -1.46
PRP18YGR006W BSD2P38356 321 aa5.96□□□□□ -1.46
PRP18YGR006W APM2P38700 605 aa5.96□□□□□ -1.46
PRP18YGR006W PSY2P40164 858 aa5.96□□□□□ -1.46
PRP18YGR006W SAM37P50110 327 aa5.96□□□□□ -1.46
PRP18YGR006W NCL1P38205 684 aaKnown RBP5.95□□□□□ -1.46
PRP18YGR006W BSC2Q05611 235 aa5.95□□□□□ -1.46
PRP18YGR006W RRP15Q06511 250 aaPredicted RBP5.95□□□□□ -1.46
PRP18YGR006W TIF6Q12522 245 aaKnown RBP5.95□□□□□ -1.46
PRP18YGR006W PHO4P07270 312 aaKnown RBP5.94□□□□□ -1.46
PRP18YGR006W DIT1P21623 536 aa5.94□□□□□ -1.46
PRP18YGR006W AIM46P38885 310 aa5.94□□□□□ -1.46
PRP18YGR006W YGR035CP53222 116 aa5.94□□□□□ -1.46
PRP18YGR006W CUZ1P53899 274 aa5.94□□□□□ -1.46
PRP18YGR006W YMR265CQ03508 461 aaKnown RBP5.94□□□□□ -1.46
PRP18YGR006W HPF1Q05164 967 aa5.94□□□□□ -1.46
PRP18YGR006W ATE1P16639 503 aa5.93□□□□□ -1.46
PRP18YGR006W NAB2P32505 525 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46 RIP-Chip
PRP18YGR006W VPS35P34110 944 aa5.93□□□□□ -1.46
PRP18YGR006W CIC1P38779 376 aaKnown RBP5.93□□□□□ -1.46
PRP18YGR006W ITC1P53125 1264 aa5.93□□□□□ -1.46
PRP18YGR006W HEH2Q03281 663 aa5.93□□□□□ -1.46
PRP18YGR006W YIL165CP40446 119 aa5.92□□□□□ -1.46
PRP18YGR006W EMG1Q06287 252 aaKnown RBP5.92□□□□□ -1.46
PRP18YGR006W NOC3Q07896 663 aaPredicted RBP5.92□□□□□ -1.46
PRP18YGR006W FPS1P23900 669 aa5.91□□□□□ -1.46
PRP18YGR006W YJR107WP47145 328 aa5.91□□□□□ -1.46
PRP18YGR006W NOP7P53261 605 aaKnown RBP5.91□□□□□ -1.46
PRP18YGR006W KRE33P53914 1056 aaKnown RBP5.91□□□□□ -1.46
PRP18YGR006W YDR461C-AQ2V2P7 80 aa5.91□□□□□ -1.46
PRP18YGR006W YER156CP40093 338 aaKnown RBP5.9□□□□□ -1.46
PRP18YGR006W DAK2P43550 591 aa5.9□□□□□ -1.46
PRP18YGR006W YNR040WP53736 256 aa5.9□□□□□ -1.46
PRP18YGR006W RSC2Q06488 889 aa5.9□□□□□ -1.46
PRP18YGR006W OXR1Q08952 273 aa5.9□□□□□ -1.46
PRP18YGR006W RPT1P33299 467 aaKnown RBP5.89□□□□□ -1.47
PRP18YGR006W ECM2P38241 364 aaKnown RBP5.89□□□□□ -1.47
PRP18YGR006W YHL008CP38750 627 aa5.89□□□□□ -1.47
PRP18YGR006W CEM1P39525 442 aa5.89□□□□□ -1.47
PRP18YGR006W ADE12P80210 433 aaKnown RBP5.88□□□□□ -1.47
PRP18YGR006W FLP1P03870 423 aa5.87□□□□□ -1.47
PRP18YGR006W SEC8P32855 1065 aa5.87□□□□□ -1.47
PRP18YGR006W LYS5P50113 272 aa5.87□□□□□ -1.47
PRP18YGR006W OYE2Q03558 400 aaKnown RBP5.87□□□□□ -1.47
PRP18YGR006W SVF1Q05515 481 aa5.87□□□□□ -1.47
PRP18YGR006W INP54Q08227 384 aaKnown RBP5.87□□□□□ -1.47
PRP18YGR006W IDI1P15496 288 aa5.86□□□□□ -1.47
PRP18YGR006W MSC7P38694 644 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms