RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C TYW3P53177 273 aa5.35□□□□□ -1.55
CDC9YDL164C CAB1Q04430 367 aa5.35□□□□□ -1.55
CDC9YDL164C FLC1Q08967 793 aa5.35□□□□□ -1.55
CDC9YDL164C MNR2P35724 969 aa5.35□□□□□ -1.55
CDC9YDL164C MPH2P0CD99 609 aa5.34□□□□□ -1.55
CDC9YDL164C PEP7P32609 515 aa5.34□□□□□ -1.55
CDC9YDL164C UTP13Q05946 817 aaKnown RBP5.34□□□□□ -1.55
CDC9YDL164C YOR131CQ12486 218 aa5.34□□□□□ -1.55
CDC9YDL164C LDB19Q12502 818 aa5.34□□□□□ -1.55
CDC9YDL164C MAL11P53048 616 aa5.34□□□□□ -1.56
CDC9YDL164C YGR021WP53212 290 aa5.34□□□□□ -1.56
CDC9YDL164C YNL035CP53962 389 aaKnown RBP5.34□□□□□ -1.56
CDC9YDL164C FOX2Q02207 900 aaKnown RBP5.34□□□□□ -1.56
CDC9YDL164C OPI10Q08202 246 aa5.34□□□□□ -1.56
CDC9YDL164C CIT1P00890 479 aa5.33□□□□□ -1.56
CDC9YDL164C DAL5P15365 543 aa5.33□□□□□ -1.56
CDC9YDL164C UBP1P25037 809 aa5.33□□□□□ -1.56
CDC9YDL164C MRC1P25588 1096 aa5.33□□□□□ -1.56
CDC9YDL164C ATG13Q06628 738 aa5.33□□□□□ -1.56
CDC9YDL164C YDL206WQ12424 762 aa5.33□□□□□ -1.56
CDC9YDL164C TMA17Q12513 150 aa5.33□□□□□ -1.56
CDC9YDL164C CDC34P14682 295 aa5.32□□□□□ -1.56
CDC9YDL164C UGA4P32837 571 aa5.32□□□□□ -1.56
CDC9YDL164C UTP14Q04500 899 aaKnown RBP5.32□□□□□ -1.56
CDC9YDL164C ESC2Q06340 456 aa5.32□□□□□ -1.56
CDC9YDL164C SLX4Q12098 748 aa5.32□□□□□ -1.56
CDC9YDL164C ADR1P07248 1323 aa5.32□□□□□ -1.56
CDC9YDL164C DPS1P04802 557 aaKnown RBP5.32□□□□□ -1.56
CDC9YDL164C SEC61P32915 480 aa5.32□□□□□ -1.56
CDC9YDL164C SNF7P39929 240 aaKnown RBP5.32□□□□□ -1.56
CDC9YDL164C VID27P40157 782 aa5.32□□□□□ -1.56
CDC9YDL164C VPS27P40343 622 aaKnown RBP5.32□□□□□ -1.56
CDC9YDL164C TIM54P47045 478 aa5.32□□□□□ -1.56
CDC9YDL164C SND1Q04007 877 aa5.32□□□□□ -1.56
CDC9YDL164C NTG2Q08214 380 aa5.32□□□□□ -1.56
CDC9YDL164C HIF1Q12373 385 aa5.32□□□□□ -1.56
CDC9YDL164C CAN1P04817 590 aa5.31□□□□□ -1.56
CDC9YDL164C SEC2P17065 759 aa5.31□□□□□ -1.56
CDC9YDL164C PUF4P25339 888 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
CDC9YDL164C RPT2P40327 437 aaKnown RBP5.31□□□□□ -1.56
CDC9YDL164C STR2P47164 639 aa5.31□□□□□ -1.56
CDC9YDL164C STE20Q03497 939 aaKnown RBP5.31□□□□□ -1.56
CDC9YDL164C CCP1P00431 361 aa5.31□□□□□ -1.56
CDC9YDL164C VAN1P23642 535 aa5.31□□□□□ -1.56
CDC9YDL164C THI4P32318 326 aa5.31□□□□□ -1.56
CDC9YDL164C NGR1P32831 672 aaKnown RBP5.31□□□□□ -1.56
CDC9YDL164C CHZ1P40019 153 aaPredicted RBP5.31□□□□□ -1.56
CDC9YDL164C ENT2Q05785 613 aa5.31□□□□□ -1.56
CDC9YDL164C YLR125WQ12138 136 aa5.31□□□□□ -1.56
CDC9YDL164C SNU66Q12420 587 aaPredicted RBP5.31□□□□□ -1.56
CDC9YDL164C TEC1P18412 486 aa5.3□□□□□ -1.56
CDC9YDL164C RTG1P32607 177 aa5.3□□□□□ -1.56
CDC9YDL164C IXR1P33417 597 aa5.3□□□□□ -1.56
CDC9YDL164C BDP1P46678 594 aa5.3□□□□□ -1.56
CDC9YDL164C PFD1P46988 109 aa5.3□□□□□ -1.56
CDC9YDL164C CDC55Q00362 526 aa5.3□□□□□ -1.56
CDC9YDL164C CEF1Q03654 590 aaPredicted RBP5.3□□□□□ -1.56
CDC9YDL164C ISC10P32645 267 aa5.3□□□□□ -1.56
CDC9YDL164C VPS35P34110 944 aa5.3□□□□□ -1.56
CDC9YDL164C AIM9P40053 627 aaKnown RBP5.3□□□□□ -1.56
CDC9YDL164C GPP1P41277 250 aaKnown RBP5.3□□□□□ -1.56
CDC9YDL164C EEB1Q02891 456 aa5.3□□□□□ -1.56
CDC9YDL164C SPO20Q04359 397 aa5.3□□□□□ -1.56
CDC9YDL164C TY1A-DR4O74302 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-HP0C2I4 478 aaKnown RBP5.29□□□□□ -1.56
CDC9YDL164C TY1A-AP0CX57 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-PR1P0CX58 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-ORP0CX59 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-PR2P0CX60 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-DR5P0CX65 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-ER2P0CX66 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-GR3P0CX67 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-LR1P0CX68 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-MR2P0CX69 440 aa5.29□□□□□ -1.56
CDC9YDL164C NOC2P39744 710 aaKnown RBP5.29□□□□□ -1.56
CDC9YDL164C SPR3P41901 512 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-JR2P47099 440 aa5.29□□□□□ -1.56
CDC9YDL164C RTA1P53047 317 aa5.29□□□□□ -1.56
CDC9YDL164C CWC24P53769 259 aa5.29□□□□□ -1.56
CDC9YDL164C ATG16Q03818 150 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-DR1Q03856 440 aa5.29□□□□□ -1.56
CDC9YDL164C MTC5Q03897 1148 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-ML1Q04706 440 aaKnown RBP5.29□□□□□ -1.56
CDC9YDL164C TDA5Q06417 326 aaKnown RBP5.29□□□□□ -1.56
CDC9YDL164C HDA3Q06623 655 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-BRQ12217 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-NL2Q12470 440 aa5.29□□□□□ -1.56
CDC9YDL164C TY1A-GR2Q12485 440 aa5.29□□□□□ -1.56
CDC9YDL164C SRF1Q12516 437 aa5.29□□□□□ -1.56
CDC9YDL164C HIR1P32479 840 aa5.28□□□□□ -1.56
CDC9YDL164C YKL222CP35995 705 aa5.28□□□□□ -1.56
CDC9YDL164C YNL034WP53963 612 aa5.28□□□□□ -1.56
CDC9YDL164C YNL018CP53976 612 aa5.28□□□□□ -1.56
CDC9YDL164C YNL011CP53980 444 aa5.28□□□□□ -1.56
CDC9YDL164C PML39Q03760 334 aa5.28□□□□□ -1.56
CDC9YDL164C ERP4Q12450 207 aa5.28□□□□□ -1.56
CDC9YDL164C YBR184WP38299 523 aa5.28□□□□□ -1.56
CDC9YDL164C PIC2P40035 300 aa5.28□□□□□ -1.56
CDC9YDL164C COG6P53959 839 aa5.28□□□□□ -1.56
CDC9YDL164C RLP24Q07915 199 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms