RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	RPL34A	P87262	121 aa	Predicted RBP	7.24	□□□□□ -1.25
RSA4	YCR072C	BUD21	Q08492	214 aa	Predicted RBP	7.24	□□□□□ -1.25
RSA4	YCR072C	TRM3	Q07527	1436 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	MSH3	P25336	1018 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	BYE1	P36106	594 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	ACO2	P39533	789 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	TPM2	P40414	161 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	KIP3	P53086	805 aa	Known RBP	7.23	□□□□□ -1.25
RSA4	YCR072C	LSP1	Q12230	341 aa	Known RBP	7.23	□□□□□ -1.25
RSA4	YCR072C	RVB2	Q12464	471 aa	Known RBP	7.23	□□□□□ -1.25
RSA4	YCR072C	KOG1	P38873	1557 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	YOR1	P53049	1477 aa		7.23	□□□□□ -1.25
RSA4	YCR072C	MKS1	P34072	584 aa		7.22	□□□□□ -1.25
RSA4	YCR072C	YAF9	P53930	226 aa		7.22	□□□□□ -1.25
RSA4	YCR072C	HAT1	Q12341	374 aa		7.22	□□□□□ -1.25
RSA4	YCR072C	TTI1	P36097	1038 aa		7.21	□□□□□ -1.26
RSA4	YCR072C	UBP2	Q01476	1272 aa		7.21	□□□□□ -1.26
RSA4	YCR072C	TIF1	P10081	395 aa	Known RBP	7.2	□□□□□ -1.26
RSA4	YCR072C	MAK16	P10962	306 aa	Predicted RBP	7.2	□□□□□ -1.26
RSA4	YCR072C	DLD1	P32891	587 aa		7.2	□□□□□ -1.26
RSA4	YCR072C	MED8	P38304	223 aa		7.2	□□□□□ -1.26
RSA4	YCR072C	TCD1	P38756	429 aa		7.2	□□□□□ -1.26
RSA4	YCR072C	CIN4	P39110	191 aa		7.2	□□□□□ -1.26
RSA4	YCR072C	OSW7	P43611	510 aa		7.2	□□□□□ -1.26
RSA4	YCR072C	BMS1	Q08965	1183 aa	Known RBP	7.2	□□□□□ -1.26
RSA4	YCR072C	ALD2	P47771	506 aa		7.19	□□□□□ -1.26
RSA4	YCR072C	NNF2	P53253	936 aa		7.19	□□□□□ -1.26
RSA4	YCR072C	VPS60	Q03390	229 aa		7.19	□□□□□ -1.26
RSA4	YCR072C	DFG5	Q05031	458 aa		7.19	□□□□□ -1.26
RSA4	YCR072C	ETT1	Q08421	412 aa	Known RBP	7.19	□□□□□ -1.26
RSA4	YCR072C	TY1A-BL	Q12266	440 aa		7.19	□□□□□ -1.26
RSA4	YCR072C	SRP54	P20424	541 aa	Known RBP	7.18	□□□□□ -1.26
RSA4	YCR072C	LTV1	P34078	463 aa		7.18	□□□□□ -1.26
RSA4	YCR072C	ECM1	P39715	212 aa		7.18	□□□□□ -1.26
RSA4	YCR072C	TAN1	P53072	289 aa	Predicted RBP	7.18	□□□□□ -1.26
RSA4	YCR072C	PDS5	Q04264	1277 aa		7.18	□□□□□ -1.26
RSA4	YCR072C	YML083C	Q04526	418 aa		7.18	□□□□□ -1.26
RSA4	YCR072C	RAD2	P07276	1031 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	GUT2	P32191	649 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	IPL1	P38991	367 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	YIR007W	P40566	764 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	YJR098C	P47139	656 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	ESC2	Q06340	456 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	UBX5	Q06682	500 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	BDS1	Q08347	646 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	TCB1	Q12466	1186 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	NUP157	P40064	1391 aa	Known RBP	7.17	□□□□□ -1.26
RSA4	YCR072C	RKR1	Q04781	1562 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	YPR204W	Q08995	1032 aa		7.17	□□□□□ -1.26
RSA4	YCR072C	NOP14	Q99207	810 aa	Known RBP	7.17	□□□□□ -1.26
RSA4	YCR072C	PDR15	Q04182	1529 aa	Known RBP	7.16	□□□□□ -1.26
RSA4	YCR072C	CLB1	P24868	471 aa		7.16	□□□□□ -1.26
RSA4	YCR072C	DEP1	P31385	405 aa		7.16	□□□□□ -1.26
RSA4	YCR072C	FBP26	P32604	452 aa		7.16	□□□□□ -1.26
RSA4	YCR072C	NAF1	P53919	492 aa	Known RBP	7.16	□□□□□ -1.26
RSA4	YCR072C	LCD1	Q04377	747 aa		7.16	□□□□□ -1.26
RSA4	YCR072C	YPR084W	Q06821	456 aa		7.16	□□□□□ -1.26
RSA4	YCR072C	RPL34B	P40525	121 aa	Known RBP	7.15	□□□□□ -1.27
RSA4	YCR072C	YGR035C	P53222	116 aa		7.15	□□□□□ -1.27
RSA4	YCR072C	RNT1	Q02555	471 aa		7.15	□□□□□ -1.27
RSA4	YCR072C	HOS3	Q02959	697 aa	Known RBP	7.15	□□□□□ -1.27
RSA4	YCR072C	ESC1	Q03661	1658 aa	Known RBP	7.15	□□□□□ -1.27
RSA4	YCR072C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.14	□□□□□ -1.27	not detected
RSA4	YCR072C	VPS15	P22219	1454 aa		7.13	□□□□□ -1.27
RSA4	YCR072C	NNF1	P47149	201 aa		7.13	□□□□□ -1.27
RSA4	YCR072C	RNH70	P53331	553 aa		7.13	□□□□□ -1.27
RSA4	YCR072C	RPN7	Q06103	429 aa	Known RBP	7.13	□□□□□ -1.27
RSA4	YCR072C	PDR5	P33302	1511 aa	Known RBP	7.13	□□□□□ -1.27
RSA4	YCR072C	RAD9	P14737	1309 aa		7.13	□□□□□ -1.27
RSA4	YCR072C	SWI3	P32591	825 aa		7.12	□□□□□ -1.27
RSA4	YCR072C	RSC1	P53236	928 aa		7.12	□□□□□ -1.27
RSA4	YCR072C	STE20	Q03497	939 aa	Known RBP	7.12	□□□□□ -1.27
RSA4	YCR072C	GRX3	Q03835	250 aa		7.12	□□□□□ -1.27
RSA4	YCR072C	ECM16	Q04217	1267 aa	Known RBP	7.11	□□□□□ -1.27
RSA4	YCR072C	ATG20	Q07528	640 aa		7.11	□□□□□ -1.27
RSA4	YCR072C	DNF1	P32660	1571 aa		7.11	□□□□□ -1.27
RSA4	YCR072C	GEA2	P39993	1459 aa	Known RBP	7.11	□□□□□ -1.27
RSA4	YCR072C	TOM20	P35180	183 aa		7.11	□□□□□ -1.27
RSA4	YCR072C	CSE4	P36012	229 aa		7.11	□□□□□ -1.27
RSA4	YCR072C	SAP190	P36123	1033 aa		7.11	□□□□□ -1.27
RSA4	YCR072C	RLP24	Q07915	199 aa	Known RBP	7.11	□□□□□ -1.27
RSA4	YCR072C	PUP1	P25043	261 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	BIO2	P32451	375 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	YBL036C	P38197	257 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	COG8	Q04632	607 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	RRP15	Q06511	250 aa	Predicted RBP	7.1	□□□□□ -1.27
RSA4	YCR072C	FRA1	Q07825	749 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	YOL087C	Q99247	1116 aa		7.1	□□□□□ -1.27
RSA4	YCR072C	STE6	P12866	1290 aa		7.09	□□□□□ -1.27
RSA4	YCR072C	MCM2	P29469	868 aa		7.09	□□□□□ -1.27
RSA4	YCR072C	OSH7	P38755	437 aa		7.09	□□□□□ -1.27
RSA4	YCR072C	HPF1	Q05164	967 aa		7.09	□□□□□ -1.27
RSA4	YCR072C	UTP13	Q05946	817 aa	Known RBP	7.09	□□□□□ -1.27
RSA4	YCR072C	TY3B-G	Q99315	1547 aa		7.09	□□□□□ -1.27
RSA4	YCR072C	RPP2B	P02400	110 aa	Known RBP	7.08	□□□□□ -1.28
RSA4	YCR072C	RTG2	P32608	588 aa	Known RBP	7.08	□□□□□ -1.28
RSA4	YCR072C	ROG3	P43602	733 aa		7.08	□□□□□ -1.28
RSA4	YCR072C	STU2	P46675	888 aa		7.08	□□□□□ -1.28
RSA4	YCR072C	ZDS1	P50111	915 aa	Known RBP	7.08	□□□□□ -1.28
RSA4	YCR072C	ITC1	P53125	1264 aa		7.08	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms