RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB5	YCL034W	THI3	Q07471	609 aa		10.99	□□□□□ -0.65
LSB5	YCL034W	MGM1	P32266	881 aa		10.98	□□□□□ -0.65
LSB5	YCL034W	BDP1	P46678	594 aa		10.98	□□□□□ -0.65
LSB5	YCL034W	POM152	P39685	1337 aa		10.98	□□□□□ -0.65
LSB5	YCL034W	FAS2	P19097	1887 aa	Known RBP	10.98	□□□□□ -0.65
LSB5	YCL034W	KRE2	P27809	442 aa		10.97	□□□□□ -0.65
LSB5	YCL034W	YKU70	P32807	602 aa		10.97	□□□□□ -0.65
LSB5	YCL034W	FIG2	P25653	1609 aa		10.97	□□□□□ -0.65
LSB5	YCL034W	PIF1	P07271	859 aa		10.96	□□□□□ -0.65
LSB5	YCL034W	CDC16	P09798	840 aa		10.96	□□□□□ -0.65
LSB5	YCL034W	MAK11	P20484	414 aa	Known RBP	10.96	□□□□□ -0.65
LSB5	YCL034W	RFC1	P38630	861 aa	Known RBP	10.96	□□□□□ -0.65
LSB5	YCL034W	MLC1	P53141	149 aa		10.96	□□□□□ -0.65
LSB5	YCL034W	PDR18	P53756	1333 aa		10.95	□□□□□ -0.66
LSB5	YCL034W	SEC18	P18759	758 aa	Known RBP	10.95	□□□□□ -0.66
LSB5	YCL034W	LEO1	P38439	464 aa		10.95	□□□□□ -0.66
LSB5	YCL034W	TIF4632	P39936	914 aa	Known RBP	10.95	□□□□□ -0.66
LSB5	YCL034W	YGL242C	P53066	181 aa		10.95	□□□□□ -0.66
LSB5	YCL034W	PSF3	Q12146	194 aa		10.95	□□□□□ -0.66
LSB5	YCL034W	RAD50	P12753	1312 aa		10.94	□□□□□ -0.66
LSB5	YCL034W	SHC1	P39000	512 aa		10.94	□□□□□ -0.66
LSB5	YCL034W	NKP2	Q06162	153 aa		10.94	□□□□□ -0.66
LSB5	YCL034W	NOT3	P06102	836 aa	Known RBP	10.93	□□□□□ -0.66
LSB5	YCL034W	RET1	P22276	1149 aa	Known RBP	10.93	□□□□□ -0.66
LSB5	YCL034W	ICL1	P28240	557 aa	Predicted RBP	10.93	□□□□□ -0.66
LSB5	YCL034W	ECM21	P38167	1117 aa	Known RBP	10.93	□□□□□ -0.66
LSB5	YCL034W	SPL2	P38839	148 aa		10.93	□□□□□ -0.66
LSB5	YCL034W	RPT4	P53549	437 aa	Known RBP	10.93	□□□□□ -0.66
LSB5	YCL034W	RRI2	Q12348	645 aa		10.92	□□□□□ -0.66
LSB5	YCL034W	SLA1	P32790	1244 aa		10.91	□□□□□ -0.66
LSB5	YCL034W	FPK1	P53739	893 aa		10.91	□□□□□ -0.66
LSB5	YCL034W	YNL193W	P53870	558 aa		10.9	□□□□□ -0.66
LSB5	YCL034W	BRE1	Q07457	700 aa	Known RBP	10.9	□□□□□ -0.66
LSB5	YCL034W	TOP1	P04786	769 aa		10.89	□□□□□ -0.67
LSB5	YCL034W	IRC4	Q03036	179 aa		10.89	□□□□□ -0.67
LSB5	YCL034W	DPL1	Q05567	589 aa		10.89	□□□□□ -0.67
LSB5	YCL034W	GLO3	P38682	493 aa	Known RBP	10.88	□□□□□ -0.67
LSB5	YCL034W	ALO1	P54783	526 aa	Known RBP	10.88	□□□□□ -0.67
LSB5	YCL034W	RPN7	Q06103	429 aa	Known RBP	10.88	□□□□□ -0.67
LSB5	YCL034W	YPR148C	Q06523	435 aa		10.88	□□□□□ -0.67
LSB5	YCL034W	LCB1	P25045	558 aa	Known RBP	10.87	□□□□□ -0.67
LSB5	YCL034W	OSH3	P38713	996 aa	Known RBP	10.87	□□□□□ -0.67
LSB5	YCL034W	HAL5	P38970	855 aa	Known RBP	10.87	□□□□□ -0.67
LSB5	YCL034W	JJJ2	P46997	583 aa		10.87	□□□□□ -0.67
LSB5	YCL034W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.87	□□□□□ -0.67	not detected
LSB5	YCL034W	SQS1	P53866	767 aa	Known RBP	10.87	□□□□□ -0.67
LSB5	YCL034W	GEF1	P37020	779 aa		10.86	□□□□□ -0.67
LSB5	YCL034W	KTR3	P38130	404 aa	Predicted RBP	10.86	□□□□□ -0.67
LSB5	YCL034W	SET4	P42948	560 aa		10.86	□□□□□ -0.67
LSB5	YCL034W	PRP42	Q03776	544 aa	Known RBP	10.86	□□□□□ -0.67
LSB5	YCL034W	ATG20	Q07528	640 aa		10.86	□□□□□ -0.67
LSB5	YCL034W	CYB2	P00175	591 aa		10.85	□□□□□ -0.67
LSB5	YCL034W	MSM1	P22438	575 aa		10.85	□□□□□ -0.67
LSB5	YCL034W	NPL4	P33755	580 aa		10.85	□□□□□ -0.67
LSB5	YCL034W	RRG1	Q12167	365 aa	Predicted RBP	10.85	□□□□□ -0.67
LSB5	YCL034W	VAS1	P07806	1104 aa	Known RBP	10.84	□□□□□ -0.67
LSB5	YCL034W	YFH7	P43591	353 aa		10.84	□□□□□ -0.67
LSB5	YCL034W	CRF1	Q04930	467 aa		10.84	□□□□□ -0.67
LSB5	YCL034W	ACK1	Q07622	623 aa	Predicted RBP	10.84	□□□□□ -0.67
LSB5	YCL034W	WRS1	Q12109	432 aa	Known RBP	10.84	□□□□□ -0.67
LSB5	YCL034W	RPC31	P17890	251 aa		10.83	□□□□□ -0.68
LSB5	YCL034W	ENP2	P48234	707 aa	Known RBP	10.83	□□□□□ -0.68
LSB5	YCL034W	MRPS35	P53292	345 aa		10.83	□□□□□ -0.68
LSB5	YCL034W	ARG82	P07250	355 aa		10.82	□□□□□ -0.68
LSB5	YCL034W	KTR1	P27810	393 aa	Known RBP	10.82	□□□□□ -0.68
LSB5	YCL034W	PBY1	P38254	753 aa		10.82	□□□□□ -0.68
LSB5	YCL034W	INM2	Q05533	292 aa		10.82	□□□□□ -0.68
LSB5	YCL034W	COQ8	P27697	501 aa		10.81	□□□□□ -0.68
LSB5	YCL034W	STS1	P38637	319 aa		10.81	□□□□□ -0.68
LSB5	YCL034W	YIR042C	P40586	236 aa		10.81	□□□□□ -0.68
LSB5	YCL034W	VPS70	P47161	811 aa		10.81	□□□□□ -0.68
LSB5	YCL034W	RMD1	Q03441	430 aa		10.81	□□□□□ -0.68
LSB5	YCL034W	OPI1	P21957	404 aa		10.8	□□□□□ -0.68
LSB5	YCL034W	SLI15	P38283	698 aa		10.8	□□□□□ -0.68
LSB5	YCL034W	STM1	P39015	273 aa	Known RBP	10.8	□□□□□ -0.68
LSB5	YCL034W	GCR2	Q01722	534 aa		10.8	□□□□□ -0.68
LSB5	YCL034W	GAS5	Q08193	484 aa		10.8	□□□□□ -0.68
LSB5	YCL034W	GSC2	P40989	1895 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	TPM1	P17536	199 aa	Known RBP	10.79	□□□□□ -0.68
LSB5	YCL034W	AFG2	P32794	780 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	PTK1	P36002	662 aa	Predicted RBP	10.79	□□□□□ -0.68
LSB5	YCL034W	SIS2	P36024	562 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	GSM1	P42950	618 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	IOC3	P43596	787 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	TOS4	Q06266	489 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	RIM20	Q12033	661 aa		10.79	□□□□□ -0.68
LSB5	YCL034W	DBP1	P24784	617 aa	Known RBP	10.78	□□□□□ -0.68
LSB5	YCL034W	GLC3	P32775	704 aa		10.78	□□□□□ -0.68
LSB5	YCL034W	RPT3	P33298	428 aa	Known RBP	10.78	□□□□□ -0.68
LSB5	YCL034W	BOI1	P38041	980 aa	Known RBP	10.78	□□□□□ -0.68
LSB5	YCL034W	BRN1	P38170	754 aa		10.78	□□□□□ -0.68
LSB5	YCL034W	TGL3	P40308	642 aa		10.78	□□□□□ -0.68
LSB5	YCL034W	APL6	P46682	809 aa		10.78	□□□□□ -0.68
LSB5	YCL034W	TIM50	Q02776	476 aa		10.78	□□□□□ -0.68
LSB5	YCL034W	FPR4	Q06205	392 aa	Predicted RBP	10.78	□□□□□ -0.68
LSB5	YCL034W	RTG2	P32608	588 aa	Known RBP	10.77	□□□□□ -0.69
LSB5	YCL034W	MDL2	P33311	773 aa		10.77	□□□□□ -0.69
LSB5	YCL034W	IRC8	P47046	822 aa		10.77	□□□□□ -0.69
LSB5	YCL034W	PIB2	P53191	635 aa		10.77	□□□□□ -0.69
LSB5	YCL034W	AAP1	P37898	856 aa	Known RBP	10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms