RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C NFI1Q12216 726 aa6.88□□□□□ -1.31
RGD1YBR260C YLL054CQ12244 843 aa6.88□□□□□ -1.31
RGD1YBR260C KAR2P16474 682 aaKnown RBP6.87□□□□□ -1.31
RGD1YBR260C ECM32P32644 1121 aaKnown RBP6.87□□□□□ -1.31
RGD1YBR260C YNG2P38806 282 aaKnown RBP6.87□□□□□ -1.31
RGD1YBR260C HOS4P40480 1083 aa6.87□□□□□ -1.31
RGD1YBR260C IAH1P41734 238 aa6.87□□□□□ -1.31
RGD1YBR260C VMR1P38735 1592 aa6.87□□□□□ -1.31
RGD1YBR260C VAS1P07806 1104 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C UBP14P38237 781 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C SPT8P38915 602 aa6.86□□□□□ -1.31
RGD1YBR260C ENT3P47160 408 aa6.86□□□□□ -1.31
RGD1YBR260C YGL242CP53066 181 aa6.86□□□□□ -1.31
RGD1YBR260C PDI1P17967 522 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C PRX1P34227 261 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C REI1P38344 393 aaPredicted RBP6.86□□□□□ -1.31
RGD1YBR260C MPH1P40562 993 aa6.86□□□□□ -1.31
RGD1YBR260C LCB5Q06147 687 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C CMS1Q07897 291 aaKnown RBP6.86□□□□□ -1.31
RGD1YBR260C YOR223WQ12015 292 aa6.86□□□□□ -1.31
RGD1YBR260C RPL19AP0CX82 189 aaKnown RBP6.85□□□□□ -1.31
RGD1YBR260C RPL19BP0CX83 189 aaPredicted RBP6.85□□□□□ -1.31
RGD1YBR260C INP52P50942 1183 aa6.85□□□□□ -1.31
RGD1YBR260C NTE1Q04958 1679 aa6.85□□□□□ -1.31
RGD1YBR260C GPA1P08539 472 aa6.84□□□□□ -1.31
RGD1YBR260C KRS1P15180 591 aaKnown RBP6.84□□□□□ -1.31
RGD1YBR260C PRP16P15938 1071 aaPredicted RBP6.84□□□□□ -1.31
RGD1YBR260C UBC1P21734 215 aaKnown RBP6.84□□□□□ -1.31
RGD1YBR260C MRPS28P21771 286 aa6.84□□□□□ -1.31
RGD1YBR260C RRP43P25359 394 aaPredicted RBP6.84□□□□□ -1.31
RGD1YBR260C RPS0AP32905 252 aaKnown RBP6.84□□□□□ -1.31
RGD1YBR260C MET10P39692 1035 aa6.84□□□□□ -1.31
RGD1YBR260C WAR1Q03631 944 aa6.84□□□□□ -1.31
RGD1YBR260C CSI1Q04368 295 aa6.84□□□□□ -1.31
RGD1YBR260C HIM1Q06674 414 aa6.84□□□□□ -1.31
RGD1YBR260C CIR2Q08822 631 aa6.84□□□□□ -1.31
RGD1YBR260C RUD3Q12234 484 aaKnown RBP6.84□□□□□ -1.31
RGD1YBR260C DNF3Q12674 1656 aa6.84□□□□□ -1.31
RGD1YBR260C MCM1P11746 286 aa6.84□□□□□ -1.31
RGD1YBR260C STE11P23561 717 aa6.84□□□□□ -1.31
RGD1YBR260C CDC15P27636 974 aa6.84□□□□□ -1.31
RGD1YBR260C TOM71P38825 639 aaKnown RBP6.84□□□□□ -1.31
RGD1YBR260C LEM3P42838 414 aa6.84□□□□□ -1.31
RGD1YBR260C SEC5P89102 971 aa6.84□□□□□ -1.31
RGD1YBR260C ATG9Q12142 997 aa6.84□□□□□ -1.31
RGD1YBR260C PRE10P21242 288 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
RGD1YBR260C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
RGD1YBR260C CCT4P39078 528 aaKnown RBP6.83□□□□□ -1.32
RGD1YBR260C YCK3P39962 524 aa6.83□□□□□ -1.32
RGD1YBR260C SPR3P41901 512 aa6.83□□□□□ -1.32
RGD1YBR260C STR2P47164 639 aa6.83□□□□□ -1.32
RGD1YBR260C APT1P49435 187 aaKnown RBP6.83□□□□□ -1.32
RGD1YBR260C TLG1Q03322 224 aa6.83□□□□□ -1.32
RGD1YBR260C TSR3Q12094 313 aaKnown RBP6.83□□□□□ -1.32
RGD1YBR260C SMC6Q12749 1114 aa6.83□□□□□ -1.32
RGD1YBR260C BNR1P40450 1375 aa6.83□□□□□ -1.32
RGD1YBR260C RAD16P31244 790 aa6.83□□□□□ -1.32
RGD1YBR260C SRP40P32583 406 aaPredicted RBP6.83□□□□□ -1.32
RGD1YBR260C MUD2P36084 527 aaKnown RBP6.83□□□□□ -1.32
RGD1YBR260C YER130CP39959 443 aa6.83□□□□□ -1.32
RGD1YBR260C VID30P53076 958 aa6.83□□□□□ -1.32
RGD1YBR260C HUL5P53119 910 aa6.83□□□□□ -1.32
RGD1YBR260C USO1P25386 1790 aa6.82□□□□□ -1.32
RGD1YBR260C ARD1P07347 238 aaPredicted RBP6.82□□□□□ -1.32
RGD1YBR260C RPO26P20435 155 aa6.82□□□□□ -1.32
RGD1YBR260C RPG1P38249 964 aaKnown RBP6.82□□□□□ -1.32
RGD1YBR260C CTF18P49956 741 aa6.82□□□□□ -1.32
RGD1YBR260C SWI1P09547 1314 aa6.82□□□□□ -1.32
RGD1YBR260C PMR1P13586 950 aa6.81□□□□□ -1.32
RGD1YBR260C RDS1P25611 832 aa6.81□□□□□ -1.32
RGD1YBR260C SEC66P33754 206 aa6.81□□□□□ -1.32
RGD1YBR260C NOC2P39744 710 aaKnown RBP6.81□□□□□ -1.32
RGD1YBR260C RTF1P53064 558 aa6.81□□□□□ -1.32
RGD1YBR260C PEX14P53112 341 aa6.81□□□□□ -1.32
RGD1YBR260C BET4Q00618 327 aa6.81□□□□□ -1.32
RGD1YBR260C YOR389WQ08912 624 aa6.81□□□□□ -1.32
RGD1YBR260C DDP1Q99321 188 aaKnown RBP6.81□□□□□ -1.32
RGD1YBR260C ISW1P38144 1129 aa6.81□□□□□ -1.32
RGD1YBR260C SEC9P40357 651 aa6.81□□□□□ -1.32
RGD1YBR260C ALD4P46367 519 aaKnown RBP6.81□□□□□ -1.32
RGD1YBR260C TIM11P81449 96 aaPredicted RBP6.81□□□□□ -1.32
RGD1YBR260C CUS1Q02554 436 aaPredicted RBP6.81□□□□□ -1.32
RGD1YBR260C ATG23Q06671 453 aa6.81□□□□□ -1.32
RGD1YBR260C HAA1Q12753 694 aaKnown RBP6.81□□□□□ -1.32
RGD1YBR260C CDC37P06101 506 aaKnown RBP6.8□□□□□ -1.32
RGD1YBR260C PDB1P32473 366 aaKnown RBP6.8□□□□□ -1.32
RGD1YBR260C YKR018CP36114 725 aa6.8□□□□□ -1.32
RGD1YBR260C YKR023WP36119 530 aaKnown RBP6.8□□□□□ -1.32
RGD1YBR260C RRM3P38766 723 aa6.8□□□□□ -1.32
RGD1YBR260C YMR124WP39523 943 aaKnown RBP6.8□□□□□ -1.32
RGD1YBR260C HUL4P40985 892 aa6.8□□□□□ -1.32
RGD1YBR260C CAF130P53280 1122 aaPredicted RBP6.8□□□□□ -1.32
RGD1YBR260C RMD1Q03441 430 aa6.8□□□□□ -1.32
RGD1YBR260C ISW2Q08773 1120 aa6.8□□□□□ -1.32
RGD1YBR260C JIP3O13555 125 aa6.79□□□□□ -1.32
RGD1YBR260C CPA2P03965 1118 aaKnown RBP6.79□□□□□ -1.32
RGD1YBR260C RAD1P06777 1100 aa6.79□□□□□ -1.32
RGD1YBR260C ARG1P22768 420 aa6.79□□□□□ -1.32
RGD1YBR260C YBR287WP38355 427 aa6.79□□□□□ -1.32
RGD1YBR260C YJR079WP47126 109 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms