RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C SET4P42948 560 aa12.78□□□□□ -0.36
SWC5YBR231C DPL1Q05567 589 aa12.78□□□□□ -0.36
SWC5YBR231C LCB1P25045 558 aaKnown RBP12.77□□□□□ -0.37
SWC5YBR231C EPS1P40557 701 aa12.77□□□□□ -0.37
SWC5YBR231C MRPS35P53292 345 aa12.77□□□□□ -0.37
SWC5YBR231C FPK1P53739 893 aa12.77□□□□□ -0.37
SWC5YBR231C DIP2Q12220 943 aaPredicted RBP12.77□□□□□ -0.37
SWC5YBR231C TOP1P04786 769 aa12.75□□□□□ -0.37
SWC5YBR231C VAS1P07806 1104 aaKnown RBP12.74□□□□□ -0.37
SWC5YBR231C KTR1P27810 393 aaKnown RBP12.74□□□□□ -0.37
SWC5YBR231C NPL4P33755 580 aa12.74□□□□□ -0.37
SWC5YBR231C GEF1P37020 779 aa12.74□□□□□ -0.37
SWC5YBR231C JJJ2P46997 583 aa12.74□□□□□ -0.37
SWC5YBR231C PRP42Q03776 544 aaKnown RBP12.74□□□□□ -0.37
SWC5YBR231C ATG20Q07528 640 aa12.74□□□□□ -0.37
SWC5YBR231C WRS1Q12109 432 aaKnown RBP12.74□□□□□ -0.37
SWC5YBR231C CYB2P00175 591 aa12.73□□□□□ -0.37
SWC5YBR231C SQS1P53866 767 aaKnown RBP12.73□□□□□ -0.37
SWC5YBR231C RMD1Q03441 430 aa12.73□□□□□ -0.37
SWC5YBR231C RRG1Q12167 365 aaPredicted RBP12.73□□□□□ -0.37
SWC5YBR231C YFH7P43591 353 aa12.72□□□□□ -0.37
SWC5YBR231C GCR2Q01722 534 aa12.72□□□□□ -0.37
SWC5YBR231C INM2Q05533 292 aa12.72□□□□□ -0.37
SWC5YBR231C ARG82P07250 355 aa12.71□□□□□ -0.37
SWC5YBR231C PBY1P38254 753 aa12.71□□□□□ -0.37
SWC5YBR231C YIR042CP40586 236 aa12.71□□□□□ -0.37
SWC5YBR231C GAS5Q08193 484 aa12.71□□□□□ -0.37
SWC5YBR231C OPI1P21957 404 aa12.7□□□□□ -0.38
SWC5YBR231C MSM1P22438 575 aa12.7□□□□□ -0.38
SWC5YBR231C BRN1P38170 754 aa12.7□□□□□ -0.38
SWC5YBR231C ENP2P48234 707 aaKnown RBP12.7□□□□□ -0.38
SWC5YBR231C TOS4Q06266 489 aa12.7□□□□□ -0.38
SWC5YBR231C ACK1Q07622 623 aaPredicted RBP12.7□□□□□ -0.38
SWC5YBR231C RIM20Q12033 661 aa12.7□□□□□ -0.38
SWC5YBR231C STM1P39015 273 aaKnown RBP12.69□□□□□ -0.38
SWC5YBR231C PIB2P53191 635 aa12.69□□□□□ -0.38
SWC5YBR231C CRF1Q04930 467 aa12.69□□□□□ -0.38
SWC5YBR231C RPT3P33298 428 aaKnown RBP12.68□□□□□ -0.38
SWC5YBR231C PTK1P36002 662 aaPredicted RBP12.68□□□□□ -0.38
SWC5YBR231C AAP1P37898 856 aaKnown RBP12.68□□□□□ -0.38
SWC5YBR231C BBC1P47068 1157 aa12.67□□□□□ -0.38
SWC5YBR231C FPR4Q06205 392 aaPredicted RBP12.67□□□□□ -0.38
SWC5YBR231C SNF3P10870 884 aa12.66□□□□□ -0.38
SWC5YBR231C TPM1P17536 199 aaKnown RBP12.66□□□□□ -0.38
SWC5YBR231C AFG2P32794 780 aa12.66□□□□□ -0.38
SWC5YBR231C DLD1P32891 587 aa12.66□□□□□ -0.38
SWC5YBR231C BOI1P38041 980 aaKnown RBP12.66□□□□□ -0.38
SWC5YBR231C YMR147WP40218 223 aaKnown RBP12.66□□□□□ -0.38
SWC5YBR231C GSM1P42950 618 aa12.66□□□□□ -0.38
SWC5YBR231C IOC3P43596 787 aa12.66□□□□□ -0.38
SWC5YBR231C IRC8P47046 822 aa12.66□□□□□ -0.38
SWC5YBR231C KAR5Q04746 504 aa12.66□□□□□ -0.38
SWC5YBR231C FLO11P08640 1367 aa12.66□□□□□ -0.38
SWC5YBR231C GRX7P38068 203 aa12.65□□□□□ -0.38
SWC5YBR231C TAH18Q12181 623 aa12.65□□□□□ -0.38
SWC5YBR231C FLO1P32768 1537 aa12.65□□□□□ -0.38
SWC5YBR231C MDL2P33311 773 aa12.64□□□□□ -0.39
SWC5YBR231C SLI15P38283 698 aa12.64□□□□□ -0.39
SWC5YBR231C APL6P46682 809 aa12.64□□□□□ -0.39
SWC5YBR231C PKH3Q03306 898 aaPredicted RBP12.64□□□□□ -0.39
SWC5YBR231C LAM4P38800 1345 aa12.63□□□□□ -0.39
SWC5YBR231C RPS7AP26786 190 aaKnown RBP12.63□□□□□ -0.39
SWC5YBR231C GLC3P32775 704 aa12.63□□□□□ -0.39
SWC5YBR231C YIR014WP40570 242 aa12.63□□□□□ -0.39
SWC5YBR231C PUS6P53294 404 aa12.63□□□□□ -0.39
SWC5YBR231C TIM50Q02776 476 aa12.63□□□□□ -0.39
SWC5YBR231C YLR278CQ05854 1341 aa12.62□□□□□ -0.39
SWC5YBR231C RTG2P32608 588 aaKnown RBP12.61□□□□□ -0.39
SWC5YBR231C MET1P36150 593 aa12.61□□□□□ -0.39
SWC5YBR231C HXT13P39924 564 aa12.61□□□□□ -0.39
SWC5YBR231C PIP2P52960 996 aa12.61□□□□□ -0.39
SWC5YBR231C HXT17P53631 564 aa12.61□□□□□ -0.39
SWC5YBR231C TRM44Q02648 567 aaKnown RBP12.6□□□□□ -0.39
SWC5YBR231C SSF2Q12153 453 aaPredicted RBP12.6□□□□□ -0.39
SWC5YBR231C YJL171CP46992 396 aa12.59□□□□□ -0.39
SWC5YBR231C YGR117CP53270 476 aa12.59□□□□□ -0.39
SWC5YBR231C SEN54Q02825 467 aaPredicted RBP12.59□□□□□ -0.39
SWC5YBR231C SKI2P35207 1287 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
SWC5YBR231C FET4P40988 552 aa12.58□□□□□ -0.4
SWC5YBR231C GSC2P40989 1895 aa12.57□□□□□ -0.4
SWC5YBR231C SPO22P40511 975 aa12.57□□□□□ -0.4
SWC5YBR231C AAD16Q02895 342 aa12.57□□□□□ -0.4
SWC5YBR231C THS1P04801 734 aaKnown RBP12.56□□□□□ -0.4
SWC5YBR231C STV1P37296 890 aa12.56□□□□□ -0.4
SWC5YBR231C RRP8P38961 392 aaKnown RBP12.56□□□□□ -0.4
SWC5YBR231C UTP7P40055 554 aaKnown RBP12.56□□□□□ -0.4
SWC5YBR231C VPS4P52917 437 aa12.56□□□□□ -0.4
SWC5YBR231C PPM2Q08282 695 aa12.56□□□□□ -0.4
SWC5YBR231C GAP1P19145 602 aaPredicted RBP12.55□□□□□ -0.4
SWC5YBR231C MSH4P40965 878 aaPredicted RBP12.55□□□□□ -0.4
SWC5YBR231C COQ1P18900 473 aa12.54□□□□□ -0.4
SWC5YBR231C RTS1P38903 757 aa12.54□□□□□ -0.4
SWC5YBR231C EMP47P43555 445 aa12.54□□□□□ -0.4
SWC5YBR231C MTC3P53077 123 aa12.54□□□□□ -0.4
SWC5YBR231C HPR1P17629 752 aaKnown RBP12.53□□□□□ -0.4
SWC5YBR231C CRG1P38892 291 aaRIP-Chip data12.53□□□□□ -0.4not detected
SWC5YBR231C SLN1P39928 1220 aaPredicted RBP12.53□□□□□ -0.4
SWC5YBR231C YPL260WQ08977 551 aa12.53□□□□□ -0.4
SWC5YBR231C TRL1P09880 827 aaKnown RBP12.52□□□□□ -0.41
SWC5YBR231C RNR2P09938 399 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 131.3 ms