RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	STE6	P12866	1290 aa		7.38	□□□□□ -1.23
ROX3	YBL093C	PTK2	P47116	818 aa	Known RBP	7.38	□□□□□ -1.23
ROX3	YBL093C	NUP192	P47054	1683 aa		7.38	□□□□□ -1.23
ROX3	YBL093C	DNF3	Q12674	1656 aa		7.38	□□□□□ -1.23
ROX3	YBL093C	DAT1	P13483	248 aa	Known RBP	7.37	□□□□□ -1.23
ROX3	YBL093C	PEP12	P32854	288 aa		7.37	□□□□□ -1.23
ROX3	YBL093C	PAF1	P38351	445 aa		7.36	□□□□□ -1.23
ROX3	YBL093C	HAL5	P38970	855 aa	Known RBP	7.36	□□□□□ -1.23
ROX3	YBL093C	NOP7	P53261	605 aa	Known RBP	7.36	□□□□□ -1.23
ROX3	YBL093C	IPL1	P38991	367 aa		7.35	□□□□□ -1.23
ROX3	YBL093C	KTR7	P40504	517 aa		7.35	□□□□□ -1.23
ROX3	YBL093C	HDA3	Q06623	655 aa		7.35	□□□□□ -1.23
ROX3	YBL093C	HAP1	P0CE41	1502 aa		7.35	□□□□□ -1.23
ROX3	YBL093C	RTC1	Q08281	1341 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	CPS1	P27614	576 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	UTR2	P32623	467 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	TYS1	P36421	394 aa	Known RBP	7.34	□□□□□ -1.23
ROX3	YBL093C	TBS1	P38114	1094 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	YAP3	P38749	330 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	AAD14	P42884	376 aa		7.34	□□□□□ -1.23
ROX3	YBL093C	URN1	Q06525	465 aa	Known RBP	7.34	□□□□□ -1.23
ROX3	YBL093C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
ROX3	YBL093C	SPT2	P06843	333 aa	Predicted RBP	7.33	□□□□□ -1.24
ROX3	YBL093C	MIP1	P15801	1254 aa		7.33	□□□□□ -1.24
ROX3	YBL093C	SSA4	P22202	642 aa	Known RBP	7.33	□□□□□ -1.24
ROX3	YBL093C	NUP85	P46673	744 aa		7.33	□□□□□ -1.24
ROX3	YBL093C	DLD3	P39976	496 aa	Known RBP	7.32	□□□□□ -1.24
ROX3	YBL093C	YFL034W	P43564	1073 aa		7.32	□□□□□ -1.24
ROX3	YBL093C	TGL4	P36165	910 aa		7.31	□□□□□ -1.24
ROX3	YBL093C	PDI1	P17967	522 aa	Known RBP	7.3	□□□□□ -1.24
ROX3	YBL093C	YLR346C	Q06139	101 aa		7.3	□□□□□ -1.24
ROX3	YBL093C	WTM2	Q12206	467 aa		7.3	□□□□□ -1.24
ROX3	YBL093C	TSC13	Q99190	310 aa		7.3	□□□□□ -1.24
ROX3	YBL093C	AIM9	P40053	627 aa	Known RBP	7.29	□□□□□ -1.24
ROX3	YBL093C	LSC2	P53312	427 aa		7.29	□□□□□ -1.24
ROX3	YBL093C	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.29	□□□□□ -1.24
ROX3	YBL093C	GAL2	P13181	574 aa		7.28	□□□□□ -1.24
ROX3	YBL093C	PHO87	P25360	923 aa		7.28	□□□□□ -1.24
ROX3	YBL093C	MET22	P32179	357 aa		7.28	□□□□□ -1.24
ROX3	YBL093C	HAP4	P14064	554 aa		7.27	□□□□□ -1.25
ROX3	YBL093C	DLD1	P32891	587 aa		7.27	□□□□□ -1.25
ROX3	YBL093C	POL5	P39985	1022 aa	Known RBP	7.27	□□□□□ -1.25
ROX3	YBL093C	SLX8	P40072	274 aa		7.27	□□□□□ -1.25
ROX3	YBL093C	ECM23	Q02710	187 aa		7.27	□□□□□ -1.25
ROX3	YBL093C	NTH2	P35172	780 aa		7.26	□□□□□ -1.25
ROX3	YBL093C	USO1	P25386	1790 aa		7.25	□□□□□ -1.25
ROX3	YBL093C	PUP1	P25043	261 aa		7.25	□□□□□ -1.25
ROX3	YBL093C	ACS2	P52910	683 aa	Known RBP	7.25	□□□□□ -1.25
ROX3	YBL093C	YDR444W	Q04093	687 aa		7.25	□□□□□ -1.25
ROX3	YBL093C	SWI5	P08153	709 aa		7.24	□□□□□ -1.25
ROX3	YBL093C	UTP7	P40055	554 aa	Known RBP	7.24	□□□□□ -1.25
ROX3	YBL093C	YJR098C	P47139	656 aa		7.24	□□□□□ -1.25
ROX3	YBL093C	UBP2	Q01476	1272 aa		7.24	□□□□□ -1.25
ROX3	YBL093C	OPT2	Q06593	877 aa		7.24	□□□□□ -1.25
ROX3	YBL093C	SUB2	Q07478	446 aa	Known RBP	7.24	□□□□□ -1.25
ROX3	YBL093C	BCK1	Q01389	1478 aa		7.24	□□□□□ -1.25
ROX3	YBL093C	RPS6A	P0CX37	236 aa	Known RBP	7.23	□□□□□ -1.25
ROX3	YBL093C	RPS6B	P0CX38	236 aa	Predicted RBP	7.23	□□□□□ -1.25
ROX3	YBL093C	LCB5	Q06147	687 aa	Known RBP	7.23	□□□□□ -1.25
ROX3	YBL093C	GAR1	P28007	205 aa	Known RBP	7.22	□□□□□ -1.25
ROX3	YBL093C	ESL2	P36168	1195 aa		7.22	□□□□□ -1.25
ROX3	YBL093C	TAF5	P38129	798 aa		7.22	□□□□□ -1.25
ROX3	YBL093C	GAS4	Q08271	471 aa		7.22	□□□□□ -1.25
ROX3	YBL093C	TCB1	Q12466	1186 aa		7.22	□□□□□ -1.25
ROX3	YBL093C	UBX7	P38349	436 aa		7.21	□□□□□ -1.26
ROX3	YBL093C	ALA1	P40825	983 aa	Known RBP	7.21	□□□□□ -1.26
ROX3	YBL093C	SUM1	P46676	1062 aa		7.21	□□□□□ -1.26
ROX3	YBL093C	NOB1	Q08444	459 aa	Known RBP	7.21	□□□□□ -1.26
ROX3	YBL093C	MLP1	Q02455	1875 aa	Known RBP	7.21	□□□□□ -1.26
ROX3	YBL093C	GLY1	P37303	387 aa	Known RBP	7.2	□□□□□ -1.26
ROX3	YBL093C	MAK10	Q02197	733 aa		7.2	□□□□□ -1.26
ROX3	YBL093C	RAD9	P14737	1309 aa		7.2	□□□□□ -1.26
ROX3	YBL093C	YLR419W	Q06698	1435 aa	Known RBP	7.19	□□□□□ -1.26
ROX3	YBL093C	TY1B-NL2	Q99337	1749 aa	Known RBP	7.19	□□□□□ -1.26
ROX3	YBL093C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
ROX3	YBL093C	ALD4	P46367	519 aa	Known RBP	7.19	□□□□□ -1.26
ROX3	YBL093C	ROM1	P53046	1155 aa		7.19	□□□□□ -1.26
ROX3	YBL093C	SCW11	P53189	542 aa		7.19	□□□□□ -1.26
ROX3	YBL093C	CYT1	P07143	309 aa		7.18	□□□□□ -1.26
ROX3	YBL093C	VAN1	P23642	535 aa		7.18	□□□□□ -1.26
ROX3	YBL093C	DAL1	P32375	460 aa		7.18	□□□□□ -1.26
ROX3	YBL093C	MSN5	P52918	1224 aa		7.18	□□□□□ -1.26
ROX3	YBL093C	SSN3	P39073	555 aa		7.17	□□□□□ -1.26
ROX3	YBL093C	ORC1	P54784	914 aa	Predicted RBP	7.17	□□□□□ -1.26
ROX3	YBL093C	YML083C	Q04526	418 aa		7.17	□□□□□ -1.26
ROX3	YBL093C	VTC4	P47075	721 aa		7.16	□□□□□ -1.26
ROX3	YBL093C	MHP1	P43638	1398 aa		7.16	□□□□□ -1.26
ROX3	YBL093C	CFT1	Q06632	1357 aa	Known RBP	7.16	□□□□□ -1.26
ROX3	YBL093C	OSH7	P38755	437 aa		7.15	□□□□□ -1.26
ROX3	YBL093C	KIP3	P53086	805 aa	Known RBP	7.15	□□□□□ -1.26
ROX3	YBL093C	KRE5	P22023	1365 aa		7.14	□□□□□ -1.27
ROX3	YBL093C	AHP1	P38013	176 aa	Known RBP	7.14	□□□□□ -1.27
ROX3	YBL093C	CAB1	Q04430	367 aa		7.14	□□□□□ -1.27
ROX3	YBL093C	YPQ2	Q06328	317 aa		7.14	□□□□□ -1.27
ROX3	YBL093C	TY1A-BL	Q12266	440 aa		7.14	□□□□□ -1.27
ROX3	YBL093C	TAF8	Q03750	510 aa		7.13	□□□□□ -1.27
ROX3	YBL093C	PUF6	Q04373	656 aa	Known RBP	7.13	□□□□□ -1.27
ROX3	YBL093C	TRS33	Q99394	268 aa		7.13	□□□□□ -1.27
ROX3	YBL093C	SSA1	P10591	642 aa	Known RBP	7.12	□□□□□ -1.27
ROX3	YBL093C	MCM1	P11746	286 aa		7.12	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms