RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C KTR3P38130 404 aaPredicted RBP2.35□□□□□ -2.03
PEP1YBL017C BBC1P47068 1157 aa2.35□□□□□ -2.03
PEP1YBL017C DUS1P53759 423 aaKnown RBP2.35□□□□□ -2.03
PEP1YBL017C ECM30Q06673 1274 aa2.35□□□□□ -2.03
PEP1YBL017C PSD2P53037 1138 aaKnown RBP2.35□□□□□ -2.03
PEP1YBL017C KIN1P13185 1064 aa2.35□□□□□ -2.03
PEP1YBL017C STB5P38699 743 aa2.35□□□□□ -2.03
PEP1YBL017C BMS1Q08965 1183 aaKnown RBP2.35□□□□□ -2.03
PEP1YBL017C PCL8Q08966 492 aa2.35□□□□□ -2.03
PEP1YBL017C PEA2P40091 420 aa2.34□□□□□ -2.03
PEP1YBL017C SCJ1P25303 377 aa2.34□□□□□ -2.03
PEP1YBL017C MPP10P47083 593 aaKnown RBP2.34□□□□□ -2.03
PEP1YBL017C FAR11P53917 953 aa2.34□□□□□ -2.03
PEP1YBL017C RAD50P12753 1312 aa2.34□□□□□ -2.03
PEP1YBL017C POA1P38218 177 aa2.34□□□□□ -2.03
PEP1YBL017C LAM4P38800 1345 aa2.34□□□□□ -2.03
PEP1YBL017C YJL181WP46987 611 aa2.34□□□□□ -2.03
PEP1YBL017C CRF1Q04930 467 aa2.34□□□□□ -2.03
PEP1YBL017C RRT14P40470 206 aa2.34□□□□□ -2.04
PEP1YBL017C IOC3P43596 787 aa2.34□□□□□ -2.04
PEP1YBL017C APL2P36000 726 aaPredicted RBP2.33□□□□□ -2.04
PEP1YBL017C NET1P47035 1189 aa2.33□□□□□ -2.04
PEP1YBL017C NCS6P53088 359 aa2.33□□□□□ -2.04
PEP1YBL017C RAD24P32641 659 aa2.33□□□□□ -2.04
PEP1YBL017C GAS5Q08193 484 aa2.33□□□□□ -2.04
PEP1YBL017C MPH3P0CE00 602 aa2.33□□□□□ -2.04
PEP1YBL017C MYO3P36006 1272 aa2.33□□□□□ -2.04
PEP1YBL017C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
PEP1YBL017C PER1P25625 357 aa2.33□□□□□ -2.04
PEP1YBL017C BSD2P38356 321 aa2.33□□□□□ -2.04
PEP1YBL017C YJL045WP47052 634 aa2.33□□□□□ -2.04
PEP1YBL017C MGM1P32266 881 aa2.32□□□□□ -2.04
PEP1YBL017C YKU70P32807 602 aa2.32□□□□□ -2.04
PEP1YBL017C RRG1Q12167 365 aaPredicted RBP2.32□□□□□ -2.04
PEP1YBL017C LDB19Q12502 818 aa2.32□□□□□ -2.04
PEP1YBL017C RME1P32338 300 aaKnown RBP2.32□□□□□ -2.04
PEP1YBL017C MAK21Q12176 1025 aaKnown RBP2.32□□□□□ -2.04
PEP1YBL017C PRP42Q03776 544 aaKnown RBP2.32□□□□□ -2.04
PEP1YBL017C RVB2Q12464 471 aaKnown RBP2.32□□□□□ -2.04
PEP1YBL017C POL3P15436 1097 aa2.31□□□□□ -2.04
PEP1YBL017C IRC4Q03036 179 aa2.31□□□□□ -2.04
PEP1YBL017C YML020WQ03722 664 aa2.31□□□□□ -2.04
PEP1YBL017C SUP35P05453 685 aaKnown RBP2.31□□□□□ -2.04
PEP1YBL017C GAL2P13181 574 aa2.31□□□□□ -2.04
PEP1YBL017C WHI3P34761 661 aaKnown RBP2.31□□□□□ -2.04
PEP1YBL017C YGR035CP53222 116 aa2.31□□□□□ -2.04
PEP1YBL017C FMP30Q02883 468 aa2.31□□□□□ -2.04
PEP1YBL017C KEL1P38853 1164 aaKnown RBP2.31□□□□□ -2.04
PEP1YBL017C MXR1P40029 184 aa2.31□□□□□ -2.04
PEP1YBL017C YFH7P43591 353 aa2.31□□□□□ -2.04
PEP1YBL017C CWH41P53008 833 aa2.31□□□□□ -2.04
PEP1YBL017C YDL144CQ07589 356 aa2.31□□□□□ -2.04
PEP1YBL017C TGL1P34163 548 aa2.3□□□□□ -2.04
PEP1YBL017C ECM16Q04217 1267 aaKnown RBP2.3□□□□□ -2.04
PEP1YBL017C CSI1Q04368 295 aa2.3□□□□□ -2.04
PEP1YBL017C SEC18P18759 758 aaKnown RBP2.3□□□□□ -2.04
PEP1YBL017C ASF1P32447 279 aa2.3□□□□□ -2.04
PEP1YBL017C MYO5Q04439 1219 aaKnown RBP2.3□□□□□ -2.04
PEP1YBL017C CLF1Q12309 687 aaPredicted RBP2.3□□□□□ -2.04
PEP1YBL017C MCM3P24279 971 aaKnown RBP2.3□□□□□ -2.04
PEP1YBL017C PCS60P38137 543 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04 RIP-Chip
PEP1YBL017C YHL050CP38721 697 aa2.3□□□□□ -2.04
PEP1YBL017C FET4P40988 552 aa2.3□□□□□ -2.04
PEP1YBL017C YGL242CP53066 181 aa2.3□□□□□ -2.04
PEP1YBL017C ISA1Q07821 250 aaPredicted RBP2.3□□□□□ -2.04
PEP1YBL017C MSM1P22438 575 aa2.29□□□□□ -2.04
PEP1YBL017C UGA4P32837 571 aa2.29□□□□□ -2.04
PEP1YBL017C APE3P37302 537 aaKnown RBP2.29□□□□□ -2.04
PEP1YBL017C APL6P46682 809 aa2.29□□□□□ -2.04
PEP1YBL017C THI3Q07471 609 aa2.29□□□□□ -2.04
PEP1YBL017C TIF6Q12522 245 aaKnown RBP2.29□□□□□ -2.04
PEP1YBL017C RAD53P22216 821 aa2.29□□□□□ -2.04
PEP1YBL017C BFA1P47113 574 aa2.29□□□□□ -2.04
PEP1YBL017C ORC1P54784 914 aaPredicted RBP2.29□□□□□ -2.04
PEP1YBL017C ZDS2P54786 942 aa2.29□□□□□ -2.04
PEP1YBL017C TAH18Q12181 623 aa2.29□□□□□ -2.04
PEP1YBL017C SNU71P53207 620 aaKnown RBP2.29□□□□□ -2.04
PEP1YBL017C RBA50Q04418 439 aa2.29□□□□□ -2.04
PEP1YBL017C TY3A-GQ12173 290 aa2.29□□□□□ -2.04
PEP1YBL017C TY3A-IQ99219 290 aa2.29□□□□□ -2.04
PEP1YBL017C SRP54P20424 541 aaKnown RBP2.29□□□□□ -2.04
PEP1YBL017C SOL4P53315 255 aa2.29□□□□□ -2.04
PEP1YBL017C YLR326WQ06170 240 aaKnown RBP2.29□□□□□ -2.04
PEP1YBL017C TPD3P31383 635 aa2.28□□□□□ -2.04
PEP1YBL017C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
PEP1YBL017C GDE1Q02979 1223 aa2.28□□□□□ -2.04
PEP1YBL017C PSH1Q12161 406 aa2.28□□□□□ -2.04
PEP1YBL017C ILV3P39522 585 aaKnown RBP2.28□□□□□ -2.04
PEP1YBL017C NSG2P53898 299 aa2.28□□□□□ -2.04
PEP1YBL017C CWC15Q03772 175 aaKnown RBP2.28□□□□□ -2.04
PEP1YBL017C FUS2Q05670 677 aa2.28□□□□□ -2.04
PEP1YBL017C PEP7P32609 515 aa2.28□□□□□ -2.04
PEP1YBL017C ECM21P38167 1117 aaKnown RBP2.28□□□□□ -2.04
PEP1YBL017C SNF7P39929 240 aaKnown RBP2.28□□□□□ -2.04
PEP1YBL017C HXT10P43581 546 aa2.28□□□□□ -2.04
PEP1YBL017C MLC1P53141 149 aa2.28□□□□□ -2.04
PEP1YBL017C RAD61Q99359 647 aa2.28□□□□□ -2.04
PEP1YBL017C TPS3P38426 1054 aaKnown RBP2.27□□□□□ -2.05
PEP1YBL017C CUS1Q02554 436 aaPredicted RBP2.27□□□□□ -2.05
PEP1YBL017C TOS4Q06266 489 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms