RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tns3Q5SSZ5 1440 aa31.33■■■□□ 2.61
Scn1b-201ENSMUST00000098548 Stard8Q8K031 1019 aa31.32■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Abca14E9Q8F8 1683 aa31.29■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Mink1Q9JM52 1308 aa31.28■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Usp32F8VPZ3 1604 aa31.27■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Itsn2Q9Z0R6 1659 aa31.27■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Tmem94Q7TSH8 1360 aa31.26■■■□□ 2.6
Scn1b-201ENSMUST00000098548 Pola1P33609 1465 aa31.26■■■□□ 2.59
Scn1b-201ENSMUST00000098548 Nwd1A6H603 1563 aa31.25■■■□□ 2.59
Scn1b-201ENSMUST00000098548 Atp2b2Q9R0K7 1198 aa31.24■■■□□ 2.59
Scn1b-201ENSMUST00000098548 Col18a1P39061 1774 aa31.21■■■□□ 2.59
Scn1b-201ENSMUST00000098548 Rreb1Q3UH06 1700 aaKnown RBP31.2■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Kif20bQ80WE4 1774 aaKnown RBP31.19■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Amigo3Q8C2S7 508 aa31.19■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Stra8P70278 393 aa31.18■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Q3UJC8 639 aa31.18■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Plekhg5Q66T02 1073 aa31.18■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Slain2Q8CI08 581 aa31.17■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Unc13bQ9Z1N9 1602 aa31.15■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Gm16486A0A1D5RMD1 1434 aa31.15■■■□□ 2.58
Scn1b-201ENSMUST00000098548 CenpjQ569L8 1344 aa31.15■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Col14a1Q80X19 1797 aa31.15■■■□□ 2.58
Scn1b-201ENSMUST00000098548 Evi5lH3BKQ3 813 aa31.14■■■□□ 2.58
Scn1b-201ENSMUST00000098548 NalcnQ8BXR5 1738 aa31.13■■■□□ 2.57
Scn1b-201ENSMUST00000098548 D430041D05RikF6ZGR6 1678 aa31.13■■■□□ 2.57
Scn1b-201ENSMUST00000098548 Smg6P61406 1418 aaKnown RBP31.12■■■□□ 2.57
Scn1b-201ENSMUST00000098548 Pik3c2bE9QAN8 1632 aa31.1■■■□□ 2.57
Scn1b-201ENSMUST00000098548 Gm10563F6WIE4 79 aa31.1■■■□□ 2.57
Scn1b-201ENSMUST00000098548 C3P01027 1663 aa31.09■■■□□ 2.57
Scn1b-201ENSMUST00000098548 Cdk19Q8BWD8 501 aa31.09■■■□□ 2.57
Scn1b-201ENSMUST00000098548 Zranb1Q7M760 708 aa31.08■■■□□ 2.57
Scn1b-201ENSMUST00000098548 NktrP30415 1453 aa31.07■■■□□ 2.56
Scn1b-201ENSMUST00000098548 Slc24a1Q91WD8 1130 aa31.05■■■□□ 2.56
Scn1b-201ENSMUST00000098548 C5P06684 1680 aa31.03■■■□□ 2.56
Scn1b-201ENSMUST00000098548 Mapk8ip2Q9ERE9 830 aa31.02■■■□□ 2.56
Scn1b-201ENSMUST00000098548 Als2Q920R0 1651 aa31.01■■■□□ 2.55
Scn1b-201ENSMUST00000098548 InsrP15208 1372 aa30.99■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Cnga1P29974 684 aa30.97■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Brinp3Q499E0 766 aa30.97■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Gsto1O09131 240 aa30.96■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Znf316Q6PGE4 1016 aa30.96■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Sipa1l2Q80TE4 1722 aa30.95■■■□□ 2.55
Scn1b-201ENSMUST00000098548 Exosc9Q9JHI7 438 aaKnown RBP30.94■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Idi1P58044 227 aa30.93■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Sox12Q04890 314 aa30.92■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Tnrc6bQ8BKI2 1810 aaKnown RBP30.9■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Atf3Q60765 181 aa30.89■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Anks4bQ8K3X6 423 aa30.89■■■□□ 2.54
Scn1b-201ENSMUST00000098548 Slc4a1apE9PX68 744 aa30.88■■■□□ 2.53
Scn1b-201ENSMUST00000098548 NgefQ8CHT1 710 aa30.88■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Sirt1Q923E4 737 aa30.87■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Abcc10Q8R4P9 1501 aa30.86■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Hspa1lP16627 641 aa30.86■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Bcl11bQ99PV8 884 aa30.84■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Iqsec2Q5DU25 1478 aa30.84■■■□□ 2.53
Scn1b-201ENSMUST00000098548 N4bp2F8VQG7 1678 aaKnown RBP30.83■■■□□ 2.53
Scn1b-201ENSMUST00000098548 Map3k19E9Q3S4 1311 aa30.82■■■□□ 2.52
Scn1b-201ENSMUST00000098548 FanciQ8K368 1330 aa30.82■■■□□ 2.52
Scn1b-201ENSMUST00000098548 PrxO55103 1391 aa30.81■■■□□ 2.52
Scn1b-201ENSMUST00000098548 Sbno1Q689Z5 1390 aa30.81■■■□□ 2.52
Scn1b-201ENSMUST00000098548 Idi2Q8BFZ6 227 aa30.79■■■□□ 2.52
Scn1b-201ENSMUST00000098548 Pank3Q8R2W9 370 aa30.79■■■□□ 2.52
Scn1b-201ENSMUST00000098548 Tmem2Q5FWI3 1383 aa30.78■■■□□ 2.52
Scn1b-201ENSMUST00000098548 PtpruB1AUH1 1446 aa30.75■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Fam184bQ0KK56 942 aa30.75■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Ap3b2Q9JME5 1082 aa30.74■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Wnk3Q80XP9 1757 aa30.74■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Mon2Q80TL7 1715 aa30.74■■■□□ 2.51
Scn1b-201ENSMUST00000098548 GnpatP98192 678 aa30.72■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Inpp5dQ9ES52 1191 aa30.72■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Tmf1B9EKI3 1091 aa30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Prdm10Q3UTQ7 1184 aa30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Kcna6Q61923 529 aa30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Anp32bQ9EST5 272 aaKnown RBP30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Ddx17Q501J6 650 aaKnown RBP30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Farp2Q91VS8 1065 aa30.71■■■□□ 2.51
Scn1b-201ENSMUST00000098548 Camta1A2A891 1682 aa30.69■■■□□ 2.5
Scn1b-201ENSMUST00000098548 Adgrl1Q80TR1 1466 aa30.68■■■□□ 2.5
Scn1b-201ENSMUST00000098548 CatipB9EKE5 520 aa30.67■■■□□ 2.5
Scn1b-201ENSMUST00000098548 Gimap5Q8BWF2 308 aa30.66■■■□□ 2.5
Scn1b-201ENSMUST00000098548 Ttll13A4Q9F6 804 aa30.65■■■□□ 2.5
Scn1b-201ENSMUST00000098548 NinlQ6ZQ12 1394 aa30.64■■■□□ 2.5
Scn1b-201ENSMUST00000098548 NrdcQ8BHG1 1161 aa30.64■■■□□ 2.5
Scn1b-201ENSMUST00000098548 KdrP35918 1367 aa30.63■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Nrxn1Q9CS84 1514 aa30.63■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Slc35g1Q8BY79 368 aa30.62■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Zscan10Q3URR7 782 aa30.61■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Tnnt3Q9QZ47 272 aa30.61■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Kif1aP33173 1695 aa30.59■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Mrs2Q5NCE8 434 aa30.59■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Wdr17E9Q271 1322 aa30.57■■■□□ 2.49
Scn1b-201ENSMUST00000098548 Kif16bB1AVY7 1312 aa30.57■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Exoc6Q8R313 802 aa30.56■■■□□ 2.48
Scn1b-201ENSMUST00000098548 DccP70211 1447 aa30.56■■■□□ 2.48
Scn1b-201ENSMUST00000098548 PnisrA2AJT4 805 aaKnown RBP30.55■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Kif24Q6NWW5 1356 aa30.55■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Pik3c2aQ61194 1686 aa30.54■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Dcaf11Q91VU6 549 aa30.54■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Tom1O88746 492 aa30.53■■■□□ 2.48
Scn1b-201ENSMUST00000098548 Znf335A2A5K6 1337 aa30.5■■■□□ 2.47
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms