RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Utp14aQ640M1 767 aaKnown RBP16.64■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Wwc2Q6NXJ0 1187 aa16.64■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Cps1Q8C196 1500 aa16.64■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Arap3Q8R5G7 1538 aa16.64■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Anp32bQ9EST5 272 aaKnown RBP16.64■□□□□ 0.25
Ldb3-203ENSMUST00000022330 PnisrA2AJT4 805 aaKnown RBP16.63■□□□□ 0.25
Ldb3-203ENSMUST00000022330 MyclP10166 368 aa16.62■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Asxl2Q8BZ32 1370 aa16.62■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Pik3r4Q8VD65 1358 aa16.62■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Brwd3A2AHJ4 1799 aa16.61■□□□□ 0.25
Ldb3-203ENSMUST00000022330 GphnQ8BUV3 769 aaKnown RBP16.6■□□□□ 0.25
Ldb3-203ENSMUST00000022330 NrdcQ8BHG1 1161 aa16.59■□□□□ 0.25
Ldb3-203ENSMUST00000022330 NktrP30415 1453 aa16.58■□□□□ 0.25
Ldb3-203ENSMUST00000022330 Mink1Q9JM52 1308 aa16.58■□□□□ 0.24
Ldb3-203ENSMUST00000022330 IghaA0A0A6YXW6 389 aa16.57■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Slc4a2P13808 1237 aaKnown RBP16.57■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Atp2b2Q9R0K7 1198 aa16.57■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Tex14Q7M6U3 1450 aa16.56■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Nrxn1Q9CS84 1514 aa16.55■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Gprasp1Q5U4C1 1347 aa16.55■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Usp32F8VPZ3 1604 aa16.54■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Exosc9Q9JHI7 438 aaKnown RBP16.54■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Rimbp3Q3V0F0 1606 aa16.53■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Gsto1O09131 240 aa16.53■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Cnga1P29974 684 aa16.53■□□□□ 0.24
Ldb3-203ENSMUST00000022330 KdrP35918 1367 aa16.53■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Rab3gap2Q8BMG7 1366 aa16.53■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Kif7B7ZNG0 1348 aa16.52■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Adgrl1Q80TR1 1466 aa16.52■□□□□ 0.24
Ldb3-203ENSMUST00000022330 Cdk19Q8BWD8 501 aa16.51■□□□□ 0.23
Ldb3-203ENSMUST00000022330 FanciQ8K368 1330 aa16.51■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Rreb1Q3UH06 1700 aaKnown RBP16.51■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Rpgrip1lQ8CG73 1264 aa16.51■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Anks4bQ8K3X6 423 aa16.51■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Dcaf11Q91VU6 549 aa16.5■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Phlpp1Q8CHE4 1687 aa16.5■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Rims2Q9EQZ7 1530 aa16.49■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Ppp2r1aQ76MZ3 589 aa16.49■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Scaf11E9PZM7 1456 aaKnown RBP16.49■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Pik3c2bE9QAN8 1632 aa16.48■□□□□ 0.23
Ldb3-203ENSMUST00000022330 D430041D05RikF6ZGR6 1678 aa16.48■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Med1Q925J9 1575 aa16.48■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Kif20bQ80WE4 1774 aaKnown RBP16.47■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Tnrc6bQ8BKI2 1810 aaKnown RBP16.46■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Zscan21Q07231 555 aa16.46■□□□□ 0.23
Ldb3-203ENSMUST00000022330 HnrnpmQ9D0E1 729 aaKnown RBP16.46■□□□□ 0.23
Ldb3-203ENSMUST00000022330 Znf710Q3U288 666 aa16.45■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Q7TT23 1179 aa16.44■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Zranb1Q7M760 708 aa16.43■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Atf7ipQ7TT18 1306 aa16.43■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Thsd7aQ69ZU6 1645 aa16.43■□□□□ 0.22
Ldb3-203ENSMUST00000022330 PtpruB1AUH1 1446 aa16.42■□□□□ 0.22
Ldb3-203ENSMUST00000022330 N4bp2F8VQG7 1678 aaKnown RBP16.42■□□□□ 0.22
Ldb3-203ENSMUST00000022330 C5P06684 1680 aa16.42■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Q3UJC8 639 aa16.41■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Sirt1Q923E4 737 aa16.41■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Scn4aQ9ER60 1841 aa16.41■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Map3k19E9Q3S4 1311 aa16.41■□□□□ 0.22
Ldb3-203ENSMUST00000022330 Als2Q920R0 1651 aa16.4■□□□□ 0.22
Ldb3-203ENSMUST00000022330 NinlQ6ZQ12 1394 aa16.39■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Nrxn3Q6P9K9 1571 aa16.39■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Unc13bQ9Z1N9 1602 aa16.39■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Kif1aP33173 1695 aa16.38■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Prdm10Q3UTQ7 1184 aa16.38■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Idi2Q8BFZ6 227 aa16.38■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Nlrp6Q91WS2 869 aa16.37■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Mon2Q80TL7 1715 aa16.36■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Abcc10Q8R4P9 1501 aa16.36■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Tnnt3Q9QZ47 272 aa16.35■□□□□ 0.21
Ldb3-203ENSMUST00000022330 IbtkQ6ZPR6 1352 aaKnown RBP16.35■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Cald1E9QA15 768 aaKnown RBP16.34■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Mak16Q8BGS0 296 aaKnown RBP16.34■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Tns3Q5SSZ5 1440 aa16.34■□□□□ 0.21
Ldb3-203ENSMUST00000022330 NalcnQ8BXR5 1738 aa16.33■□□□□ 0.21
Ldb3-203ENSMUST00000022330 Col14a1Q80X19 1797 aa16.33■□□□□ 0.2
Ldb3-203ENSMUST00000022330 CatipB9EKE5 520 aa16.33■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Iqsec2Q5DU25 1478 aa16.32■□□□□ 0.2
Ldb3-203ENSMUST00000022330 C3P01027 1663 aa16.32■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Znf316Q6PGE4 1016 aa16.3■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Znf335A2A5K6 1337 aa16.3■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Ofd1Q80Z25 1017 aa16.3■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Tmem94Q7TSH8 1360 aa16.29■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Kiaa1107Q80TK0 1369 aa16.28■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Gm10563F6WIE4 79 aa16.27■□□□□ 0.2
Ldb3-203ENSMUST00000022330 Kif16bB1AVY7 1312 aa16.27■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Astn2Q80Z10 1352 aa16.26■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Esx1O88933 382 aa16.26■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Mdc1Q5PSV9 1707 aa16.25■□□□□ 0.19
Ldb3-203ENSMUST00000022330 GsdmaQ9EST1 446 aa16.24■□□□□ 0.19
Ldb3-203ENSMUST00000022330 P2rx7Q9Z1M0 595 aa16.24■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Ltbp4Q8K4G1 1666 aa16.23■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Pik3c2aQ61194 1686 aa16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Idi1P58044 227 aa16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Usp19Q3UJD6 1360 aa16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Chd4Q6PDQ2 1915 aaKnown RBP16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Col16a1Q8BLX7 1580 aa16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Sipa1l2Q80TE4 1722 aa16.22■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Hoxb7P09024 217 aa16.21■□□□□ 0.19
Ldb3-203ENSMUST00000022330 Ap3b2Q9JME5 1082 aa16.21■□□□□ 0.18
Ldb3-203ENSMUST00000022330 Col18a1P39061 1774 aa16.21■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 101.3 ms