RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Gm35339A0A140LHH9 1649 aa25.75■■□□□ 1.71
Ldb3-203ENSMUST00000022330 NischQ80TM9 1593 aa25.68■■□□□ 1.7
Ldb3-203ENSMUST00000022330 Abcc9P70170 1546 aa24.97■■□□□ 1.59
Ldb3-203ENSMUST00000022330 Abcc8B2RUS7 1588 aa24.6■■□□□ 1.53
Ldb3-203ENSMUST00000022330 ScribQ80U72 1612 aa23.28■■□□□ 1.32
Ldb3-203ENSMUST00000022330 Dcaf1Q80TR8 1506 aa22.92■■□□□ 1.26
Ldb3-203ENSMUST00000022330 Rhox8Q6VSS7 320 aa22.86■■□□□ 1.25
Ldb3-203ENSMUST00000022330 Kdm5dQ62240 1548 aa22.69■■□□□ 1.22
Ldb3-203ENSMUST00000022330 NacadQ5SWP3 1504 aa22.63■■□□□ 1.21
Ldb3-203ENSMUST00000022330 Rb1cc1Q9ESK9 1588 aa22.47■■□□□ 1.19
Ldb3-203ENSMUST00000022330 Ccdc180J3QNE4 1664 aa22.39■■□□□ 1.17
Ldb3-203ENSMUST00000022330 Rtl1Q7M732 1744 aa22.31■■□□□ 1.16
Ldb3-203ENSMUST00000022330 Baz1aO88379 1555 aa22.22■■□□□ 1.15
Ldb3-203ENSMUST00000022330 Sycp2Q9CUU3 1500 aa22.15■■□□□ 1.14
Ldb3-203ENSMUST00000022330 Crybg2B7ZCC2 1516 aa21.99■■□□□ 1.11
Ldb3-203ENSMUST00000022330 BicraF8VPZ9 1578 aa21.71■■□□□ 1.07
Ldb3-203ENSMUST00000022330 Zcchc6Q5BLK4 1491 aaKnown RBP21.7■■□□□ 1.06
Ldb3-203ENSMUST00000022330 Smarca2Q6DIC0 1577 aa21.65■■□□□ 1.06
Ldb3-203ENSMUST00000022330 Ccdc136Q3TVA9 1136 aa21.23■□□□□ 0.99
Ldb3-203ENSMUST00000022330 Cecr2E9Q2Z1 1453 aa21.18■□□□□ 0.98
Ldb3-203ENSMUST00000022330 Smarca4Q3TKT4 1613 aaKnown RBP21.07■□□□□ 0.96
Ldb3-203ENSMUST00000022330 Brd4Q9ESU6 1400 aaKnown RBP21.05■□□□□ 0.96
Ldb3-203ENSMUST00000022330 Trim41Q5NCC3 630 aa21■□□□□ 0.95
Ldb3-203ENSMUST00000022330 Pds5bQ4VA53 1446 aaKnown RBP20.93■□□□□ 0.94
Ldb3-203ENSMUST00000022330 Synj1Q8CHC4 1574 aa20.93■□□□□ 0.94
Ldb3-203ENSMUST00000022330 Cttnbp2B9EJA2 1648 aa20.9■□□□□ 0.94
Ldb3-203ENSMUST00000022330 Atad2bE9Q166 1460 aaKnown RBP20.89■□□□□ 0.94
Ldb3-203ENSMUST00000022330 CftrP26361 1476 aa20.87■□□□□ 0.93
Ldb3-203ENSMUST00000022330 Iqgap2Q3UQ44 1575 aa20.83■□□□□ 0.93
Ldb3-203ENSMUST00000022330 HrcG5E8J6 738 aa20.6■□□□□ 0.89
Ldb3-203ENSMUST00000022330 Golga3P55937 1487 aa20.59■□□□□ 0.89
Ldb3-203ENSMUST00000022330 Thoc2B1AZI6 1594 aaKnown RBP20.58■□□□□ 0.88
Ldb3-203ENSMUST00000022330 Ercc6F8VPZ5 1481 aa20.54■□□□□ 0.88
Ldb3-203ENSMUST00000022330 Wdr62Q3U3T8 1523 aa20.53■□□□□ 0.88
Ldb3-203ENSMUST00000022330 Top2bQ64511 1612 aa20.52■□□□□ 0.88
Ldb3-203ENSMUST00000022330 Esf1Q3V1V3 845 aaKnown RBP20.49■□□□□ 0.87
Ldb3-203ENSMUST00000022330 Frmpd1A2AKB4 1549 aa20.47■□□□□ 0.87
Ldb3-203ENSMUST00000022330 Cngb1E1AZ71 1325 aa20.42■□□□□ 0.86
Ldb3-203ENSMUST00000022330 Unc13aQ4KUS2 1712 aa20.3■□□□□ 0.84
Ldb3-203ENSMUST00000022330 Cc2d2aQ8CFW7 1633 aa20.29■□□□□ 0.84
Ldb3-203ENSMUST00000022330 Cep164Q5DU05 1446 aa20.29■□□□□ 0.84
Ldb3-203ENSMUST00000022330 Rsf1E9PWW9 1441 aaKnown RBP20.24■□□□□ 0.83
Ldb3-203ENSMUST00000022330 Fmn1Q05860 1466 aa20.22■□□□□ 0.83
Ldb3-203ENSMUST00000022330 Ccdc88bQ4QRL3 1481 aa20.22■□□□□ 0.83
Ldb3-203ENSMUST00000022330 Fam135aQ6NS59 1506 aa20.2■□□□□ 0.82
Ldb3-203ENSMUST00000022330 Phldb1Q6PDH0 1371 aaKnown RBP20.16■□□□□ 0.82
Ldb3-203ENSMUST00000022330 TnnQ80Z71 1560 aa20.16■□□□□ 0.82
Ldb3-203ENSMUST00000022330 Lamc3Q9R0B6 1581 aa20.13■□□□□ 0.81
Ldb3-203ENSMUST00000022330 Chic1Q8CBW7 227 aa20.11■□□□□ 0.81
Ldb3-203ENSMUST00000022330 Dnajc5bQ9CQ94 199 aa20.07■□□□□ 0.8
Ldb3-203ENSMUST00000022330 Top2aQ01320 1528 aaKnown RBP20.01■□□□□ 0.79
Ldb3-203ENSMUST00000022330 Baz1bQ9Z277 1479 aa20.01■□□□□ 0.79
Ldb3-203ENSMUST00000022330 Kif15Q6P9L6 1387 aa19.97■□□□□ 0.79
Ldb3-203ENSMUST00000022330 Ubl4bQ9CQ84 188 aa19.87■□□□□ 0.77
Ldb3-203ENSMUST00000022330 Camsap1A2AHC3 1581 aa19.86■□□□□ 0.77
Ldb3-203ENSMUST00000022330 Ccdc18Q640L5 1455 aa19.8■□□□□ 0.76
Ldb3-203ENSMUST00000022330 Cux2P70298 1426 aa19.8■□□□□ 0.76
Ldb3-203ENSMUST00000022330 Gab3Q8BSM5 595 aa19.74■□□□□ 0.75
Ldb3-203ENSMUST00000022330 Rapgef2Q8CHG7 1496 aa19.71■□□□□ 0.75
Ldb3-203ENSMUST00000022330 Mrc2Q64449 1479 aa19.71■□□□□ 0.75
Ldb3-203ENSMUST00000022330 Grin2bQ01097 1482 aa19.64■□□□□ 0.73
Ldb3-203ENSMUST00000022330 NrkQ9R0G8 1455 aa19.63■□□□□ 0.73
Ldb3-203ENSMUST00000022330 Il27Q8K3I6 234 aa19.61■□□□□ 0.73
Ldb3-203ENSMUST00000022330 Npm1Q61937 292 aaKnown RBP19.6■□□□□ 0.73
Ldb3-203ENSMUST00000022330 Shroom4Q1W617 1475 aa19.57■□□□□ 0.72
Ldb3-203ENSMUST00000022330 Eif4g1Q6NZJ6 1600 aaKnown RBP19.55■□□□□ 0.72
Ldb3-203ENSMUST00000022330 LrpprcQ6PB66 1392 aaKnown RBP19.54■□□□□ 0.72
Ldb3-203ENSMUST00000022330 Kif21aQ9QXL2 1672 aa19.53■□□□□ 0.72
Ldb3-203ENSMUST00000022330 Cep162Q6ZQ06 1403 aa19.53■□□□□ 0.72
Ldb3-203ENSMUST00000022330 PtprkP35822 1457 aa19.52■□□□□ 0.71
Ldb3-203ENSMUST00000022330 PogzQ8BZH4 1409 aaKnown RBP19.51■□□□□ 0.71
Ldb3-203ENSMUST00000022330 Npm2Q80W85 207 aa19.47■□□□□ 0.71
Ldb3-203ENSMUST00000022330 Efcab5A0JP43 1406 aa19.44■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Dhx29Q6PGC1 1365 aaKnown RBP19.43■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Duox2A2AQ99 1517 aa19.43■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Crocc2F6XLV1 1638 aa19.42■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Arhgap35Q91YM2 1499 aa19.4■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Map3k1P53349 1493 aa19.4■□□□□ 0.7
Ldb3-203ENSMUST00000022330 Mroh2bQ7M6Y6 1581 aa19.33■□□□□ 0.69
Ldb3-203ENSMUST00000022330 Samd9lQ69Z37 1561 aa19.33■□□□□ 0.68
Ldb3-203ENSMUST00000022330 Lrriq1Q0P5X1 1673 aa19.3■□□□□ 0.68
Ldb3-203ENSMUST00000022330 AqrQ8CFQ3 1481 aaKnown RBP19.28■□□□□ 0.68
Ldb3-203ENSMUST00000022330 SynmQ70IV5 1561 aa19.25■□□□□ 0.67
Ldb3-203ENSMUST00000022330 Myt1lP97500 1187 aa19.24■□□□□ 0.67
Ldb3-203ENSMUST00000022330 Urb2E9Q7L1 1524 aaKnown RBP19.22■□□□□ 0.67
Ldb3-203ENSMUST00000022330 Plb1Q3TTY0 1478 aa19.22■□□□□ 0.67
Ldb3-203ENSMUST00000022330 Zeb1Q64318 1117 aa19.2■□□□□ 0.66
Ldb3-203ENSMUST00000022330 Clip1Q922J3 1391 aa19.19■□□□□ 0.66
Ldb3-203ENSMUST00000022330 Ehmt2Q9Z148 1263 aaKnown RBP19.18■□□□□ 0.66
Ldb3-203ENSMUST00000022330 Carmil1Q6EDY6 1374 aa19.16■□□□□ 0.66
Ldb3-203ENSMUST00000022330 Pbrm1Q8BSQ9 1634 aaKnown RBP19.14■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Ift140E9PY46 1464 aa19.13■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Rad54l2Q99NG0 1466 aa19.13■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Gpatch8A2A6A1 1505 aa19.1■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Magi3Q9EQJ9 1476 aa19.09■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Disp1Q3TDN0 1521 aa19.09■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Erich3F6QRE9 1637 aa19.08■□□□□ 0.65
Ldb3-203ENSMUST00000022330 Polr1aO35134 1717 aaKnown RBP19.08■□□□□ 0.64
Ldb3-203ENSMUST00000022330 Eea1Q8BL66 1411 aa19.07■□□□□ 0.64
Ldb3-203ENSMUST00000022330 Pla2r1Q62028 1487 aa19.07■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 187.4 ms