RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	YPL039W	Q03080	316 aa		4.65	□□□□□ -1.67
CHL4	YDR254W	ANT1	Q06497	328 aa		4.65	□□□□□ -1.67
CHL4	YDR254W	RPB5	P20434	215 aa		4.64	□□□□□ -1.67
CHL4	YDR254W	ATP15	P21306	62 aa		4.64	□□□□□ -1.67
CHL4	YDR254W	VTC1	P40046	129 aa	RIP-Chip data	4.64	□□□□□ -1.67	not detected
CHL4	YDR254W	FIT1	Q04433	528 aa		4.64	□□□□□ -1.67
CHL4	YDR254W	RPL13A	Q12690	199 aa	Predicted RBP	4.64	□□□□□ -1.67
CHL4	YDR254W	NAG1	Q8TGN9	163 aa		4.64	□□□□□ -1.67
CHL4	YDR254W	MED11	Q99278	115 aa		4.64	□□□□□ -1.67
CHL4	YDR254W	CHC1	P22137	1653 aa	Known RBP	4.63	□□□□□ -1.67
CHL4	YDR254W	CPA1	P07258	411 aa	Known RBP	4.63	□□□□□ -1.67
CHL4	YDR254W	ATR1	P13090	542 aa		4.63	□□□□□ -1.67
CHL4	YDR254W	NOP1	P15646	327 aa	Known RBP	4.63	□□□□□ -1.67
CHL4	YDR254W	SPG1	P50088	95 aa		4.63	□□□□□ -1.67
CHL4	YDR254W	DUR1,2	P32528	1835 aa	Known RBP	4.63	□□□□□ -1.67
CHL4	YDR254W	MSW1	P04803	379 aa		4.62	□□□□□ -1.67
CHL4	YDR254W	DDR48	P18899	430 aa	Known RBP	4.62	□□□□□ -1.67
CHL4	YDR254W	EMP24	P32803	203 aa	Known RBP	4.62	□□□□□ -1.67
CHL4	YDR254W	CLB6	P32943	380 aa		4.62	□□□□□ -1.67
CHL4	YDR254W	YMR090W	Q04304	227 aa	Known RBP	4.62	□□□□□ -1.67
CHL4	YDR254W	GAL83	Q04739	417 aa		4.62	□□□□□ -1.67
CHL4	YDR254W	YPR174C	Q06616	221 aa	Predicted RBP	4.62	□□□□□ -1.67
CHL4	YDR254W	PST1	Q12355	444 aa		4.62	□□□□□ -1.67
CHL4	YDR254W	ATO3	Q12359	275 aa		4.62	□□□□□ -1.67
CHL4	YDR254W	RPL21B	Q12672	160 aa	Known RBP	4.62	□□□□□ -1.67
CHL4	YDR254W	YAR023C	D6VPM8	179 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	RPL42A	P0CX27	106 aa	Known RBP	4.61	□□□□□ -1.67
CHL4	YDR254W	RPL42B	P0CX28	106 aa	Known RBP	4.61	□□□□□ -1.67
CHL4	YDR254W	YCR050C	P25630	102 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	YCR099C	P25657	155 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	TMA19	P35691	167 aa	Known RBP	4.61	□□□□□ -1.67
CHL4	YDR254W	PAM17	P36147	197 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	CCS1	P40202	249 aa	Known RBP	4.61	□□□□□ -1.67
CHL4	YDR254W	YPL067C	Q02754	198 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	SYM1	Q06563	197 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	FYV12	Q08559	129 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	ATG5	Q12380	294 aa		4.61	□□□□□ -1.67
CHL4	YDR254W	RAS2	P01120	322 aa	Known RBP	4.6	□□□□□ -1.67
CHL4	YDR254W	YEL028W	P39989	153 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	NSA2	P40078	261 aa	Known RBP	4.6	□□□□□ -1.67
CHL4	YDR254W	YER135C	P40082	130 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	TIR3	P40552	269 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	YIR035C	P40579	254 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	BNS1	P50084	137 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	CRH1	P53301	507 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	YDR102C	Q03864	110 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	RRT7	Q07829	113 aa		4.6	□□□□□ -1.67
CHL4	YDR254W	YRF1-2	P40105	1681 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	FMT1	P32785	401 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	HOT13	P36078	116 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	YND1	P40009	630 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	DIM1	P41819	318 aa	Known RBP	4.59	□□□□□ -1.67
CHL4	YDR254W	ATG18	P43601	500 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	SHH3	Q04487	196 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	FIT3	Q08907	204 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	AYT1	Q12226	474 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	YOR376W-A	Q3E805	51 aa		4.59	□□□□□ -1.67
CHL4	YDR254W	UBR1	P19812	1950 aa		4.59	□□□□□ -1.68
CHL4	YDR254W	BUD3	P25558	1636 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	VTH1	P40438	1549 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	VTH2	P40890	1549 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	HMRA1	P0CY11	126 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	YMR244W	Q04018	355 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	YMR254C	Q04838	102 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	GPI11	Q06636	219 aa		4.58	□□□□□ -1.68
CHL4	YDR254W	SMT3	Q12306	101 aa	Known RBP	4.58	□□□□□ -1.68
CHL4	YDR254W	FAS2	P19097	1887 aa	Known RBP	4.58	□□□□□ -1.68
CHL4	YDR254W	YFL067W	P43537	175 aa		4.57	□□□□□ -1.68
CHL4	YDR254W	MPC1	P53157	130 aa	Known RBP	4.57	□□□□□ -1.68
CHL4	YDR254W	RPL21A	Q02753	160 aa	Known RBP	4.57	□□□□□ -1.68
CHL4	YDR254W	YDR029W	Q12111	104 aa		4.57	□□□□□ -1.68
CHL4	YDR254W	YPL247C	Q12523	523 aa		4.57	□□□□□ -1.68
CHL4	YDR254W	MLP2	P40457	1679 aa		4.57	□□□□□ -1.68
CHL4	YDR254W	COX5B	P00425	151 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	RPL9A	P05738	191 aa	Known RBP	4.56	□□□□□ -1.68
CHL4	YDR254W	YGL010W	P25338	174 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	FLO5	P38894	1075 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	HPA3	P39979	161 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	ARC15	P40518	154 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
CHL4	YDR254W	RPL9B	P51401	191 aa	Known RBP	4.56	□□□□□ -1.68
CHL4	YDR254W	YNR064C	P53750	290 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	MRPS8	Q03799	155 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	YMR082C	Q04276	118 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	NDD1	Q08887	554 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	FEX1	Q08913	375 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	FEX2	Q08991	375 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	JID1	Q12350	301 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	KSH1	Q8TGJ3	72 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	ODC2	Q99297	307 aa		4.56	□□□□□ -1.68
CHL4	YDR254W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.56	□□□□□ -1.68
CHL4	YDR254W	YAL064W	P39711	94 aa		4.55	□□□□□ -1.68
CHL4	YDR254W	SPO73	P40031	143 aa		4.55	□□□□□ -1.68
CHL4	YDR254W	RSM10	Q03201	203 aa		4.55	□□□□□ -1.68
CHL4	YDR254W	YDR115W	Q04598	105 aa		4.55	□□□□□ -1.68
CHL4	YDR254W	TIM9	O74700	87 aa		4.54	□□□□□ -1.68
CHL4	YDR254W	MDH2	P22133	377 aa		4.54	□□□□□ -1.68
CHL4	YDR254W	RPR2	P40571	144 aa		4.54	□□□□□ -1.68
CHL4	YDR254W	YFR035C	P43608	114 aa		4.54	□□□□□ -1.68
CHL4	YDR254W	YGL118C	P53132	145 aa		4.54	□□□□□ -1.68
CHL4	YDR254W	HAL1	Q01766	294 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms