Protein–RNA interactions for Protein: P40078

NSA2, Ribosome biogenesis protein NSA2, yeastyeast

Known RBP Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NSA2P40078 NSR1YGR159C 1245 nt16.54■□□□□ 0.24
NSA2P40078 YML009W-BYML009W-B 477 nt16.33■□□□□ 0.2
NSA2P40078 NOP1YDL014W 984 nt15.82■□□□□ 0.12
NSA2P40078 MDJ1YFL016C 1536 nt14.89□□□□□ -0.03
NSA2P40078 YKL036CYKL036C 393 nt14.29□□□□□ -0.12
NSA2P40078 SRX1YKL086W 384 nt13.79□□□□□ -0.2
NSA2P40078 YJL027CYJL027C 417 nt13.76□□□□□ -0.21
NSA2P40078 Q0297Q0297 156 nt13.73□□□□□ -0.21
NSA2P40078 DBP2YNL112W 1641 nt13.06□□□□□ -0.32
NSA2P40078 YCR051WYCR051W 669 nt13.03□□□□□ -0.32
NSA2P40078 SSA3YBL075C 1950 nt12.93□□□□□ -0.34
NSA2P40078 YBR190WYBR190W 312 nt12.83□□□□□ -0.36
NSA2P40078 SCS3YGL126W 1143 nt12.8□□□□□ -0.36
NSA2P40078 TRN1tP(UGG)A 72 nt12.63□□□□□ -0.39
NSA2P40078 SUF9tP(UGG)F 72 nt12.63□□□□□ -0.39
NSA2P40078 SUF8tP(UGG)H 72 nt12.63□□□□□ -0.39
NSA2P40078 tP(UGG)LtP(UGG)L 72 nt12.63□□□□□ -0.39
NSA2P40078 SUF7tP(UGG)M 72 nt12.63□□□□□ -0.39
NSA2P40078 tP(UGG)N1tP(UGG)N1 72 nt12.63□□□□□ -0.39
NSA2P40078 tP(UGG)N2tP(UGG)N2 72 nt12.63□□□□□ -0.39
NSA2P40078 tP(UGG)O1tP(UGG)O1 72 nt12.63□□□□□ -0.39
NSA2P40078 SUF11tP(UGG)O2 72 nt12.63□□□□□ -0.39
NSA2P40078 RTC3YHR087W 336 nt12.5□□□□□ -0.41
NSA2P40078 CCC1YLR220W 969 nt12.47□□□□□ -0.41
NSA2P40078 YOL085CYOL085C 342 nt12.37□□□□□ -0.43
NSA2P40078 RPP1BYDL130W 321 nt12.31□□□□□ -0.44
NSA2P40078 RVS167YDR388W 1449 nt12.28□□□□□ -0.44
NSA2P40078 PKP1YIL042C 1185 nt12.17□□□□□ -0.46
NSA2P40078 SCJ1YMR214W 1134 nt12.08□□□□□ -0.48
NSA2P40078 PUT4YOR348C 1884 nt11.87□□□□□ -0.51
NSA2P40078 tP(UGG)O3tP(UGG)O3 72 nt11.86□□□□□ -0.51
NSA2P40078 PET122YER153C 765 nt11.77□□□□□ -0.53
NSA2P40078 SHR5YOL110W 714 nt11.77□□□□□ -0.53
NSA2P40078 SCR1SCR1 522 nt11.6□□□□□ -0.55
NSA2P40078 URN1YPR152C 1398 nt11.59□□□□□ -0.55
NSA2P40078 ARE1YCR048W 1833 nt11.53□□□□□ -0.56
NSA2P40078 OPI9YLR338W 858 nt11.5□□□□□ -0.57
NSA2P40078 YDJ1YNL064C 1230 nt11.5□□□□□ -0.57
NSA2P40078 SAH1YER043C 1350 nt11.47□□□□□ -0.57
NSA2P40078 DEP1YAL013W 1218 nt11.47□□□□□ -0.57
NSA2P40078 POA1YBR022W 534 nt11.45□□□□□ -0.58
NSA2P40078 RPN10YHR200W 807 nt11.41□□□□□ -0.58
NSA2P40078 RRN5YLR141W 1092 nt11.4□□□□□ -0.58
NSA2P40078 SPT5YML010W 3192 nt11.4□□□□□ -0.59
NSA2P40078 YHR049C-AYHR049C-A 297 nt11.39□□□□□ -0.59
NSA2P40078 ATS1YAL020C 1002 nt11.39□□□□□ -0.59
NSA2P40078 SSA4YER103W 1929 nt11.34□□□□□ -0.59
NSA2P40078 YNL208WYNL208W 600 nt11.33□□□□□ -0.6
NSA2P40078 BSC6YOL137W 1494 nt11.32□□□□□ -0.6
NSA2P40078 GAR1YHR089C 618 nt11.24□□□□□ -0.61
NSA2P40078 PUN1YLR414C 792 nt11.19□□□□□ -0.62
NSA2P40078 YER088W-BYER088W-B 147 nt11.18□□□□□ -0.62
NSA2P40078 BUD23YCR047C 828 nt11.09□□□□□ -0.63
NSA2P40078 RSB1YOR049C 1065 nt11.08□□□□□ -0.64
NSA2P40078 PTC2YER089C 1395 nt11.06□□□□□ -0.64
NSA2P40078 YJR018WYJR018W 363 nt11.04□□□□□ -0.64
NSA2P40078 BDF1YLR399C 2061 nt11□□□□□ -0.65
NSA2P40078 NAB2YGL122C 1578 nt10.99□□□□□ -0.65
NSA2P40078 TIR1YER011W 765 nt10.89□□□□□ -0.67
NSA2P40078 TAT1YBR069C 1860 nt10.84□□□□□ -0.67
NSA2P40078 SSA1YAL005C 1929 nt10.79□□□□□ -0.68
NSA2P40078 DAL1YIR027C 1383 nt10.78□□□□□ -0.68
NSA2P40078 RPP2BYDR382W 333 nt10.78□□□□□ -0.68
NSA2P40078 YJR120WYJR120W 351 nt10.78□□□□□ -0.68
NSA2P40078 FIS1YIL065C 468 nt10.77□□□□□ -0.69
NSA2P40078 PAC11YDR488C 1602 nt10.76□□□□□ -0.69
NSA2P40078 INM2YDR287W 879 nt10.73□□□□□ -0.69
NSA2P40078 FPR4YLR449W 1179 nt10.72□□□□□ -0.69
NSA2P40078 MEP2YNL142W 1500 nt10.72□□□□□ -0.69
NSA2P40078 PHO4YFR034C 939 nt10.67□□□□□ -0.7
NSA2P40078 PST2YDR032C 597 nt10.6□□□□□ -0.71
NSA2P40078 YPS1YLR120C 1710 nt10.55□□□□□ -0.72
NSA2P40078 YBL100CYBL100C 315 nt10.55□□□□□ -0.72
NSA2P40078 DCW1YKL046C 1350 nt10.52□□□□□ -0.73
NSA2P40078 SRB2YHR041C 633 nt10.51□□□□□ -0.73
NSA2P40078 BDH2YAL061W 1254 nt10.5□□□□□ -0.73
NSA2P40078 NVJ2YPR091C 2313 nt10.49□□□□□ -0.73
NSA2P40078 YHR165W-AYHR165W-A 312 nt10.47□□□□□ -0.73
NSA2P40078 YDR095CYDR095C 411 nt10.46□□□□□ -0.73
NSA2P40078 YBR220CYBR220C 1683 nt10.43□□□□□ -0.74
NSA2P40078 FUN26YAL022C 1554 nt10.41□□□□□ -0.74
NSA2P40078 YMR090WYMR090W 684 nt10.38□□□□□ -0.75
NSA2P40078 EMI2YDR516C 1503 nt10.37□□□□□ -0.75
NSA2P40078 TRM9YML014W 840 nt10.35□□□□□ -0.75
NSA2P40078 WWM1YFL010C 636 nt10.34□□□□□ -0.75
NSA2P40078 ALF1YNL148C 765 nt10.34□□□□□ -0.75
NSA2P40078 LSM3YLR438C-A 270 nt10.33□□□□□ -0.76
NSA2P40078 RPP2AYOL039W 321 nt10.27□□□□□ -0.77
NSA2P40078 CCT6YDR188W 1641 nt10.26□□□□□ -0.77
NSA2P40078 SDH1YKL148C 1923 nt10.26□□□□□ -0.77
NSA2P40078 PCH2YBR186W 1695 nt10.25□□□□□ -0.77
NSA2P40078 YGR021WYGR021W 873 nt10.25□□□□□ -0.77
NSA2P40078 YDL221WYDL221W 552 nt10.23□□□□□ -0.77
NSA2P40078 PTP1YDL230W 1008 nt10.23□□□□□ -0.77
NSA2P40078 YFL021C-AYFL021C-A 855 nt10.23□□□□□ -0.77
NSA2P40078 SUF2tP(AGG)C 72 nt10.23□□□□□ -0.77
NSA2P40078 SUF10tP(AGG)N 72 nt10.23□□□□□ -0.77
NSA2P40078 GUT2YIL155C 1950 nt10.22□□□□□ -0.77
NSA2P40078 SHU1YHL006C 453 nt10.21□□□□□ -0.77
NSA2P40078 SEC11YIR022W 504 nt10.19□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms