RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W PRP18P33411 251 aaPredicted RBP1.63□□□□□ -2.15
ECM5YMR176W RPF1P38805 295 aaKnown RBP1.63□□□□□ -2.15
ECM5YMR176W AIF1P52923 378 aa1.63□□□□□ -2.15
ECM5YMR176W CGI121Q03705 181 aaKnown RBP1.63□□□□□ -2.15
ECM5YMR176W YDR278CQ05612 105 aa1.63□□□□□ -2.15
ECM5YMR176W ATG10Q07879 167 aa1.63□□□□□ -2.15
ECM5YMR176W YBR121C-AP0C5L4 52 aa1.63□□□□□ -2.15
ECM5YMR176W SUA7P29055 345 aaPredicted RBP1.63□□□□□ -2.15
ECM5YMR176W TVP38P36164 337 aa1.63□□□□□ -2.15
ECM5YMR176W YGP1P38616 354 aaKnown RBP1.63□□□□□ -2.15
ECM5YMR176W IPT1P38954 527 aa1.63□□□□□ -2.15
ECM5YMR176W CAT5P41735 233 aa1.63□□□□□ -2.15
ECM5YMR176W MGA1P53050 456 aa1.63□□□□□ -2.15
ECM5YMR176W NRK1P53915 240 aa1.63□□□□□ -2.15
ECM5YMR176W APS2Q00381 147 aa1.63□□□□□ -2.15
ECM5YMR176W NUP49Q02199 472 aa1.63□□□□□ -2.15
ECM5YMR176W CUE4Q04201 117 aaPredicted RBP1.63□□□□□ -2.15
ECM5YMR176W YML096WQ04489 525 aa1.63□□□□□ -2.15
ECM5YMR176W YIR021W-AQ3E739 70 aa1.63□□□□□ -2.15
ECM5YMR176W SLO1Q3E784 85 aa1.63□□□□□ -2.15
ECM5YMR176W Q0255P03881 472 aa1.63□□□□□ -2.15
ECM5YMR176W ANB1P19211 157 aa1.63□□□□□ -2.15
ECM5YMR176W MED6P38782 295 aa1.63□□□□□ -2.15
ECM5YMR176W GPI14P47088 403 aaKnown RBP1.63□□□□□ -2.15
ECM5YMR176W NUP57P48837 541 aa1.63□□□□□ -2.15
ECM5YMR176W PRP11Q07350 266 aaPredicted RBP1.63□□□□□ -2.15
ECM5YMR176W NIP7Q08962 181 aaKnown RBP1.63□□□□□ -2.15
ECM5YMR176W SUS1Q6WNK7 96 aa1.63□□□□□ -2.15
ECM5YMR176W RIB3Q99258 208 aa1.63□□□□□ -2.15
ECM5YMR176W PEX4P29340 183 aa1.62□□□□□ -2.15
ECM5YMR176W UPS2P35200 230 aa1.62□□□□□ -2.15
ECM5YMR176W MRPL24P36525 258 aaPredicted RBP1.62□□□□□ -2.15
ECM5YMR176W YNL194CP40169 301 aa1.62□□□□□ -2.15
ECM5YMR176W GLR1P41921 483 aaKnown RBP1.62□□□□□ -2.15
ECM5YMR176W ERV29P53337 310 aa1.62□□□□□ -2.15
ECM5YMR176W MPA43P53583 542 aaPredicted RBP1.62□□□□□ -2.15
ECM5YMR176W VPS28Q02767 242 aa1.62□□□□□ -2.15
ECM5YMR176W ATG39Q06159 398 aa1.62□□□□□ -2.15
ECM5YMR176W YDR157WA0A023PZE8 133 aa1.62□□□□□ -2.15
ECM5YMR176W MDH3P32419 343 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
ECM5YMR176W RFC2P40348 353 aa1.62□□□□□ -2.15
ECM5YMR176W BRR6P53062 197 aa1.62□□□□□ -2.15
ECM5YMR176W CUS2P53830 285 aaPredicted RBP1.62□□□□□ -2.15
ECM5YMR176W ELC1Q03071 99 aa1.62□□□□□ -2.15
ECM5YMR176W MIX17Q03667 156 aa1.62□□□□□ -2.15
ECM5YMR176W SCP1Q08873 200 aa1.62□□□□□ -2.15
ECM5YMR176W YHR125WP38831 101 aa1.62□□□□□ -2.15
ECM5YMR176W ARC15P40518 154 aaRIP-Chip data1.62□□□□□ -2.15not detected
ECM5YMR176W MRPL49P40858 161 aaPredicted RBP1.62□□□□□ -2.15
ECM5YMR176W LSM7P53905 115 aaKnown RBP1.62□□□□□ -2.15
ECM5YMR176W RPL9AP05738 191 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W ADH3P07246 375 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W BUB2P26448 306 aaPredicted RBP1.61□□□□□ -2.15
ECM5YMR176W CLB6P32943 380 aa1.61□□□□□ -2.15
ECM5YMR176W ATG8P38182 117 aaRIP-Chip data1.61□□□□□ -2.15not detected
ECM5YMR176W DAN1P47178 298 aa1.61□□□□□ -2.15
ECM5YMR176W RPL9BP51401 191 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W YPL067CQ02754 198 aa1.61□□□□□ -2.15
ECM5YMR176W YDR391CQ04170 232 aa1.61□□□□□ -2.15
ECM5YMR176W MHT1Q12525 324 aa1.61□□□□□ -2.15
ECM5YMR176W HTL1Q9URQ5 78 aa1.61□□□□□ -2.15
ECM5YMR176W RAD6P06104 172 aa1.61□□□□□ -2.15
ECM5YMR176W SEC4P07560 215 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W DDI2P0CH63 225 aa1.61□□□□□ -2.15
ECM5YMR176W DDI3P0CH64 225 aa1.61□□□□□ -2.15
ECM5YMR176W STE18P18852 110 aa1.61□□□□□ -2.15
ECM5YMR176W UBC8P28263 218 aa1.61□□□□□ -2.15
ECM5YMR176W SEC17P32602 292 aa1.61□□□□□ -2.15
ECM5YMR176W MRPL11P36521 249 aaPredicted RBP1.61□□□□□ -2.15
ECM5YMR176W SBH2P52871 88 aa1.61□□□□□ -2.15
ECM5YMR176W YNL033WP53964 284 aa1.61□□□□□ -2.15
ECM5YMR176W YNL019CP53975 284 aa1.61□□□□□ -2.15
ECM5YMR176W YMR099CQ03161 297 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W YLR361C-AQ3E795 98 aa1.61□□□□□ -2.15
ECM5YMR176W VMA9Q3E7B6 73 aa1.61□□□□□ -2.15
ECM5YMR176W YBR063CP38083 404 aa1.61□□□□□ -2.15
ECM5YMR176W ECM33P38248 429 aaKnown RBP1.61□□□□□ -2.15
ECM5YMR176W BMT5P40493 336 aa1.61□□□□□ -2.15
ECM5YMR176W FIS1P40515 155 aa1.61□□□□□ -2.15
ECM5YMR176W MAK3Q03503 176 aa1.61□□□□□ -2.15
ECM5YMR176W RDS3Q06835 107 aaPredicted RBP1.61□□□□□ -2.15
ECM5YMR176W GPM2Q12008 311 aa1.61□□□□□ -2.15
ECM5YMR176W YGL194C-AQ2V2P6 80 aa1.61□□□□□ -2.15
ECM5YMR176W YHR032W-AP0C5N6 59 aa1.6□□□□□ -2.15
ECM5YMR176W YCR023CP25351 611 aa1.6□□□□□ -2.15
ECM5YMR176W STP22P25604 385 aa1.6□□□□□ -2.15
ECM5YMR176W MGT1P26188 188 aa1.6□□□□□ -2.15
ECM5YMR176W UTR5P32630 166 aa1.6□□□□□ -2.15
ECM5YMR176W SHE2P36068 246 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
ECM5YMR176W MRPL28P36527 147 aa1.6□□□□□ -2.15
ECM5YMR176W DER1P38307 211 aa1.6□□□□□ -2.15
ECM5YMR176W IRC22P40006 225 aa1.6□□□□□ -2.15
ECM5YMR176W PRM10P42946 383 aa1.6□□□□□ -2.15
ECM5YMR176W MPC1P53157 130 aaKnown RBP1.6□□□□□ -2.15
ECM5YMR176W TRM12Q04235 462 aa1.6□□□□□ -2.15
ECM5YMR176W FIT1Q04433 528 aa1.6□□□□□ -2.15
ECM5YMR176W SHH3Q04487 196 aa1.6□□□□□ -2.15
ECM5YMR176W YOL131WQ08270 108 aa1.6□□□□□ -2.15
ECM5YMR176W FSF1Q12029 327 aaKnown RBP1.6□□□□□ -2.15
ECM5YMR176W RPL13AQ12690 199 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms